RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 ITM2CQ9NQX7 267 aa14.1□□□□□ -0.15
VEGFA-201ENST00000230480 SPTLC3Q9NUV7 552 aa14.1□□□□□ -0.15
VEGFA-201ENST00000230480 TMEM248Q9NWD8 314 aa14.1□□□□□ -0.15
VEGFA-201ENST00000230480 USP36Q9P275 1121 aaKnown RBP14.1□□□□□ -0.15
VEGFA-201ENST00000230480 LAMA1P25391 3075 aa14.09□□□□□ -0.15
VEGFA-201ENST00000230480 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.09□□□□□ -0.15
VEGFA-201ENST00000230480 ESPNB1AK53 854 aa14.09□□□□□ -0.15
VEGFA-201ENST00000230480 IGLV3-19P01714 112 aa14.09□□□□□ -0.15
VEGFA-201ENST00000230480 MYBL1P10243 752 aa14.09□□□□□ -0.15
VEGFA-201ENST00000230480 RHOQP17081 205 aa14.09□□□□□ -0.15
VEGFA-201ENST00000230480 RPS14P62263 151 aaKnown RBP14.09□□□□□ -0.15
VEGFA-201ENST00000230480 ARF5P84085 180 aa14.09□□□□□ -0.15
VEGFA-201ENST00000230480 ECT2LQ008S8 904 aa14.09□□□□□ -0.15
VEGFA-201ENST00000230480 ZNF177Q13360 481 aaPredicted RBP14.09□□□□□ -0.15
VEGFA-201ENST00000230480 SLC12A1Q13621 1099 aa14.09□□□□□ -0.15
VEGFA-201ENST00000230480 TRIM14Q14142 442 aa14.09□□□□□ -0.15
VEGFA-201ENST00000230480 PMS2CLQ68D20 193 aa14.09□□□□□ -0.15
VEGFA-201ENST00000230480 PPP1R2P3Q6NXS1 205 aa14.09□□□□□ -0.15
VEGFA-201ENST00000230480 SCYL2Q6P3W7 929 aa14.09□□□□□ -0.15
VEGFA-201ENST00000230480 SERPINA13PQ6UXR4 307 aa14.09□□□□□ -0.15
VEGFA-201ENST00000230480 SETD3Q86TU7 594 aaPredicted RBP14.09□□□□□ -0.15
VEGFA-201ENST00000230480 SLC41A1Q8IVJ1 513 aa14.09□□□□□ -0.15
VEGFA-201ENST00000230480 TP53INP2Q8IXH6 220 aa14.09□□□□□ -0.15
VEGFA-201ENST00000230480 OR2T3Q8NH03 318 aa14.09□□□□□ -0.15
VEGFA-201ENST00000230480 UCMAQ8WVF2 138 aa14.09□□□□□ -0.15
VEGFA-201ENST00000230480 ZYG11BQ9C0D3 744 aa14.09□□□□□ -0.15
VEGFA-201ENST00000230480 NHEJ1Q9H9Q4 299 aaPredicted RBP14.09□□□□□ -0.15
VEGFA-201ENST00000230480 TMEM51Q9NW97 253 aa14.09□□□□□ -0.15
VEGFA-201ENST00000230480 PCSK1NQ9UHG2 260 aa14.09□□□□□ -0.15
VEGFA-201ENST00000230480 VPS51Q9UID3 782 aa14.09□□□□□ -0.15
VEGFA-201ENST00000230480 MFHAS1Q9Y4C4 1052 aa14.09□□□□□ -0.15
VEGFA-201ENST00000230480 SPTBN2O15020 2390 aa14.09□□□□□ -0.15
VEGFA-201ENST00000230480 DCHS1Q96JQ0 3298 aa14.09□□□□□ -0.15
VEGFA-201ENST00000230480 ILVBLA1L0T0 632 aa14.08□□□□□ -0.16
VEGFA-201ENST00000230480 ANKRD62A6NC57 917 aa14.08□□□□□ -0.16
VEGFA-201ENST00000230480 WASH4PA8MWX3 477 aa14.08□□□□□ -0.16
VEGFA-201ENST00000230480 AKR1B15C9JRZ8 316 aaPredicted RBP14.08□□□□□ -0.16
VEGFA-201ENST00000230480 ATP9BO43861 1147 aa14.08□□□□□ -0.16
VEGFA-201ENST00000230480 ASLP04424 464 aa14.08□□□□□ -0.16
VEGFA-201ENST00000230480 ATP5BP06576 529 aaKnown RBP14.08□□□□□ -0.16
VEGFA-201ENST00000230480 SRPRAP08240 638 aaKnown RBP14.08□□□□□ -0.16
VEGFA-201ENST00000230480 SRCP12931 536 aa14.08□□□□□ -0.16
VEGFA-201ENST00000230480 IL4RP24394 825 aa14.08□□□□□ -0.16
VEGFA-201ENST00000230480 PTGER3P43115 390 aa14.08□□□□□ -0.16
VEGFA-201ENST00000230480 ARSEP51690 589 aa14.08□□□□□ -0.16
VEGFA-201ENST00000230480 SLC25A11Q02978 314 aaKnown RBP14.08□□□□□ -0.16
VEGFA-201ENST00000230480 ATP13A4Q4VNC1 1196 aa14.08□□□□□ -0.16
VEGFA-201ENST00000230480 FNDC3BQ53EP0 1204 aaKnown RBP14.08□□□□□ -0.16
VEGFA-201ENST00000230480 PLA2G2CQ5R387 149 aa14.08□□□□□ -0.16
VEGFA-201ENST00000230480 PRR23BQ6ZRT6 265 aa14.08□□□□□ -0.16
VEGFA-201ENST00000230480 TMEM139Q8IV31 216 aa14.08□□□□□ -0.16
VEGFA-201ENST00000230480 NIPA2Q8N8Q9 360 aa14.08□□□□□ -0.16
VEGFA-201ENST00000230480 ZNF557Q8N988 423 aaPredicted RBP14.08□□□□□ -0.16
VEGFA-201ENST00000230480 ARHGEF2Q92974 986 aaKnown RBP14.08□□□□□ -0.16
VEGFA-201ENST00000230480 NUP85Q9BW27 656 aa14.08□□□□□ -0.16
VEGFA-201ENST00000230480 RSPH9Q9H1X1 276 aaPredicted RBP14.08□□□□□ -0.16
VEGFA-201ENST00000230480 OSGEPQ9NPF4 335 aa14.08□□□□□ -0.16
VEGFA-201ENST00000230480 TMEM74BQ9NUR3 256 aa14.08□□□□□ -0.16
VEGFA-201ENST00000230480 WSB2Q9NYS7 404 aaPredicted RBP14.08□□□□□ -0.16
VEGFA-201ENST00000230480 SERGEFQ9UGK8 458 aa14.08□□□□□ -0.16
VEGFA-201ENST00000230480 SARDHQ9UL12 918 aa14.08□□□□□ -0.16
VEGFA-201ENST00000230480 TFR2Q9UP52 801 aa14.08□□□□□ -0.16
VEGFA-201ENST00000230480 PLA2G4CQ9UP65 541 aa14.08□□□□□ -0.16
VEGFA-201ENST00000230480 HS3ST2Q9Y278 367 aa14.08□□□□□ -0.16
VEGFA-201ENST00000230480 PAXBP1Q9Y5B6 917 aa14.08□□□□□ -0.16
VEGFA-201ENST00000230480 SLCO1B1Q9Y6L6 691 aa14.08□□□□□ -0.16
VEGFA-201ENST00000230480 ASCC3Q8N3C0 2202 aaKnown RBP14.08□□□□□ -0.16
VEGFA-201ENST00000230480 ADAMTS9Q9P2N4 1935 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 CABIN1Q9Y6J0 2220 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 EPN2O95208 641 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 LCA5LO95447 670 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 TPM3P06753 285 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 RHOCP08134 193 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 OR1E1P30953 314 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 TPMTP51580 245 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 TAS2R40P59535 323 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 GNA12Q03113 381 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 USP39Q53GS9 565 aaKnown RBP14.07□□□□□ -0.16
VEGFA-201ENST00000230480 ACBD5Q5T8D3 534 aaPredicted RBP14.07□□□□□ -0.16
VEGFA-201ENST00000230480 AFMIDQ63HM1 303 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 LAIR1Q6GTX8 287 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 SDE2Q6IQ49 451 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 LINGO4Q6UY18 593 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 SH2D3CQ8N5H7 860 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 DEFB119Q8N690 84 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 NETO2Q8NC67 525 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 FAM71BQ8TC56 605 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 TSC1Q92574 1164 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 RUBCNQ92622 972 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 FAM131CQ96AQ9 280 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 TBC1D31Q96DN5 1066 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 SMOC1Q9H4F8 434 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 PRDM16Q9HAZ2 1276 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 RXFP3Q9NSD7 469 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 ETNK2Q9NVF9 386 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 DNAI1Q9UI46 699 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 CYP8B1Q9UNU6 501 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 REXO2Q9Y3B8 237 aaKnown RBP14.07□□□□□ -0.16
VEGFA-201ENST00000230480 PCDH15Q96QU1 1955 aa14.07□□□□□ -0.16
VEGFA-201ENST00000230480 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms