RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 CCDC66A2RUB6 948 aa24.23■■□□□ 1.47
HOMER3-201ENST00000221222 LRRD1A4D1F6 860 aa24.23■■□□□ 1.47
HOMER3-201ENST00000221222 C3orf70A6NLC5 250 aaPredicted RBP24.23■■□□□ 1.47
HOMER3-201ENST00000221222 RNF40O75150 1001 aa24.23■■□□□ 1.47
HOMER3-201ENST00000221222 MRPS21P82921 87 aaKnown RBP24.23■■□□□ 1.47
HOMER3-201ENST00000221222 ZFYVE27Q5T4F4 411 aa24.23■■□□□ 1.47
HOMER3-201ENST00000221222 MBLAC2Q68D91 279 aa24.23■■□□□ 1.47
HOMER3-201ENST00000221222 APCDD1Q8J025 514 aa24.23■■□□□ 1.47
HOMER3-201ENST00000221222 DTWD2Q8NBA8 298 aa24.23■■□□□ 1.47
HOMER3-201ENST00000221222 KRT35Q92764 455 aa24.23■■□□□ 1.47
HOMER3-201ENST00000221222 CHRDQ9H2X0 955 aa24.23■■□□□ 1.47
HOMER3-201ENST00000221222 HCN2Q9UL51 889 aa24.23■■□□□ 1.47
HOMER3-201ENST00000221222 DCLK1O15075 740 aa24.22■■□□□ 1.47
HOMER3-201ENST00000221222 KRT1P04264 644 aa24.22■■□□□ 1.47
HOMER3-201ENST00000221222 DCNP07585 359 aaKnown RBP24.22■■□□□ 1.47
HOMER3-201ENST00000221222 HNRNPLP14866 589 aaKnown RBP eCLIP24.22■■□□□ 1.47
HOMER3-201ENST00000221222 POLR2EP19388 210 aaKnown RBP24.22■■□□□ 1.47
HOMER3-201ENST00000221222 MARCKSL1P49006 195 aa24.22■■□□□ 1.47
HOMER3-201ENST00000221222 GNA12Q03113 381 aa24.22■■□□□ 1.47
HOMER3-201ENST00000221222 ASCL5Q7RTU5 278 aa24.22■■□□□ 1.47
HOMER3-201ENST00000221222 USP33Q8TEY7 942 aa24.22■■□□□ 1.47
HOMER3-201ENST00000221222 UCMAQ8WVF2 138 aa24.22■■□□□ 1.47
HOMER3-201ENST00000221222 ALS2CR12Q96Q35 445 aa24.22■■□□□ 1.47
HOMER3-201ENST00000221222 IER2Q9BTL4 223 aa24.22■■□□□ 1.47
HOMER3-201ENST00000221222 KLC2Q9H0B6 622 aa24.22■■□□□ 1.47
HOMER3-201ENST00000221222 MUC3BQ9H195 1237 aa24.22■■□□□ 1.47
HOMER3-201ENST00000221222 MAGEH1Q9H213 219 aa24.22■■□□□ 1.47
HOMER3-201ENST00000221222 NOL6Q9H6R4 1146 aaKnown RBP24.22■■□□□ 1.47
HOMER3-201ENST00000221222 RIF1Q5UIP0 2472 aaKnown RBP24.21■■□□□ 1.47
HOMER3-201ENST00000221222 A0A0D9SEW6 157 aa24.21■■□□□ 1.47
HOMER3-201ENST00000221222 ANTXRLA6NF34 631 aa24.21■■□□□ 1.47
HOMER3-201ENST00000221222 MIF4GDA9UHW6 222 aaKnown RBP24.21■■□□□ 1.47
HOMER3-201ENST00000221222 CHURC1-FNTBB4DL54 471 aa24.21■■□□□ 1.47
HOMER3-201ENST00000221222 RAMP2O60895 175 aa24.21■■□□□ 1.47
HOMER3-201ENST00000221222 FTCDO95954 541 aa24.21■■□□□ 1.47
HOMER3-201ENST00000221222 AMPD1P23109 780 aa24.21■■□□□ 1.47
HOMER3-201ENST00000221222 ETFBP38117 255 aa24.21■■□□□ 1.47
HOMER3-201ENST00000221222 SEC13P55735 322 aa24.21■■□□□ 1.47
HOMER3-201ENST00000221222 YBEYP58557 167 aaPredicted RBP24.21■■□□□ 1.47
HOMER3-201ENST00000221222 MMRN1Q13201 1228 aa24.21■■□□□ 1.47
HOMER3-201ENST00000221222 E2F5Q15329 346 aa24.21■■□□□ 1.47
HOMER3-201ENST00000221222 ANGPT1Q15389 498 aa24.21■■□□□ 1.47
HOMER3-201ENST00000221222 HSF5Q4G112 596 aaPredicted RBP24.21■■□□□ 1.47
HOMER3-201ENST00000221222 ANKRD20A8PQ5CZ79 823 aa24.21■■□□□ 1.47
HOMER3-201ENST00000221222 EMC10Q5UCC4 262 aa24.21■■□□□ 1.47
HOMER3-201ENST00000221222 Q6ZS52 159 aa24.21■■□□□ 1.47
HOMER3-201ENST00000221222 CIPCQ9C0C6 399 aa24.21■■□□□ 1.47
HOMER3-201ENST00000221222 VPS28Q9UK41 221 aa24.21■■□□□ 1.47
HOMER3-201ENST00000221222 NUP205Q92621 2012 aa24.21■■□□□ 1.47
HOMER3-201ENST00000221222 NPC1O15118 1278 aa24.2■■□□□ 1.46
HOMER3-201ENST00000221222 ASLP04424 464 aa24.2■■□□□ 1.46
HOMER3-201ENST00000221222 ATP5BP06576 529 aaKnown RBP24.2■■□□□ 1.46
HOMER3-201ENST00000221222 DLDP09622 509 aaKnown RBP24.2■■□□□ 1.46
HOMER3-201ENST00000221222 PEX5P50542 639 aa24.2■■□□□ 1.46
HOMER3-201ENST00000221222 NDST2P52849 883 aa24.2■■□□□ 1.46
HOMER3-201ENST00000221222 SULT2A1Q06520 285 aa24.2■■□□□ 1.46
HOMER3-201ENST00000221222 GAS6Q14393 721 aa24.2■■□□□ 1.46
HOMER3-201ENST00000221222 TAZQ16635 292 aa24.2■■□□□ 1.46
HOMER3-201ENST00000221222 ODF2Q5BJF6 829 aa24.2■■□□□ 1.46
HOMER3-201ENST00000221222 AFMIDQ63HM1 303 aa24.2■■□□□ 1.46
HOMER3-201ENST00000221222 EGFLAMQ63HQ2 1017 aa24.2■■□□□ 1.46
HOMER3-201ENST00000221222 LZTR1Q8N653 840 aa24.2■■□□□ 1.46
HOMER3-201ENST00000221222 ZNF513Q8N8E2 541 aaPredicted RBP24.2■■□□□ 1.46
HOMER3-201ENST00000221222 DCAF4L2Q8NA75 395 aa24.2■■□□□ 1.46
HOMER3-201ENST00000221222 TRIM58Q8NG06 486 aa24.2■■□□□ 1.46
HOMER3-201ENST00000221222 OR7D4Q8NG98 312 aa24.2■■□□□ 1.46
HOMER3-201ENST00000221222 EXD1Q8NHP7 514 aa24.2■■□□□ 1.46
HOMER3-201ENST00000221222 PCDH19Q8TAB3 1148 aa24.2■■□□□ 1.46
HOMER3-201ENST00000221222 ACE2Q9BYF1 805 aaPredicted RBP24.2■■□□□ 1.46
HOMER3-201ENST00000221222 THAP10Q9P2Z0 257 aaPredicted RBP24.2■■□□□ 1.46
HOMER3-201ENST00000221222 ZRANB2O95218 330 aaKnown RBP eCLIP24.19■■□□□ 1.46
HOMER3-201ENST00000221222 TIE1P35590 1138 aa24.19■■□□□ 1.46
HOMER3-201ENST00000221222 NBL1P41271 181 aa24.19■■□□□ 1.46
HOMER3-201ENST00000221222 POLD3Q15054 466 aaPredicted RBP24.19■■□□□ 1.46
HOMER3-201ENST00000221222 PTPRNQ16849 979 aa24.19■■□□□ 1.46
HOMER3-201ENST00000221222 PARP15Q460N3 678 aa24.19■■□□□ 1.46
HOMER3-201ENST00000221222 C2orf27AQ580R0 203 aa24.19■■□□□ 1.46
HOMER3-201ENST00000221222 TMCO3Q6UWJ1 677 aa24.19■■□□□ 1.46
HOMER3-201ENST00000221222 TRMT11Q7Z4G4 463 aaKnown RBP24.19■■□□□ 1.46
HOMER3-201ENST00000221222 RCOR2Q8IZ40 523 aa24.19■■□□□ 1.46
HOMER3-201ENST00000221222 IL17RCQ8NAC3 791 aa24.19■■□□□ 1.46
HOMER3-201ENST00000221222 RPLP0P6Q8NHW5 317 aa24.19■■□□□ 1.46
HOMER3-201ENST00000221222 SORCS1Q8WY21 1168 aa24.19■■□□□ 1.46
HOMER3-201ENST00000221222 ARHGEF2Q92974 986 aaKnown RBP24.19■■□□□ 1.46
HOMER3-201ENST00000221222 ACDQ96AP0 544 aa24.19■■□□□ 1.46
HOMER3-201ENST00000221222 RNF25Q96BH1 459 aaPredicted RBP24.19■■□□□ 1.46
HOMER3-201ENST00000221222 HES6Q96HZ4 224 aa24.19■■□□□ 1.46
HOMER3-201ENST00000221222 RBM41Q96IZ5 413 aaKnown RBP24.19■■□□□ 1.46
HOMER3-201ENST00000221222 RNF157Q96PX1 679 aa24.19■■□□□ 1.46
HOMER3-201ENST00000221222 PSMB7Q99436 277 aa24.19■■□□□ 1.46
HOMER3-201ENST00000221222 C2orf49Q9BVC5 232 aaPredicted RBP24.19■■□□□ 1.46
HOMER3-201ENST00000221222 LRRC19Q9H756 370 aa24.19■■□□□ 1.46
HOMER3-201ENST00000221222 ETNK2Q9NVF9 386 aa24.19■■□□□ 1.46
HOMER3-201ENST00000221222 TRMT1Q9NXH9 659 aaKnown RBP24.19■■□□□ 1.46
HOMER3-201ENST00000221222 GOLGA6L9A6NEM1 432 aa24.18■■□□□ 1.46
HOMER3-201ENST00000221222 PROB1E7EW31 1015 aa24.18■■□□□ 1.46
HOMER3-201ENST00000221222 ACVRL1P37023 503 aa24.18■■□□□ 1.46
HOMER3-201ENST00000221222 RWDD2BP57060 319 aa24.18■■□□□ 1.46
HOMER3-201ENST00000221222 ENPP2Q13822 863 aa24.18■■□□□ 1.46
HOMER3-201ENST00000221222 MFSD7Q6UXD7 560 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms