RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 GALNTL6Q49A17 601 aa14□□□□□ -0.17
SIX4-201ENST00000216513 LVRNQ6Q4G3 990 aa14□□□□□ -0.17
SIX4-201ENST00000216513 KLHL23Q8NBE8 558 aa14□□□□□ -0.17
SIX4-201ENST00000216513 TPCN2Q8NHX9 752 aa14□□□□□ -0.17
SIX4-201ENST00000216513 HSFY1Q96LI6 401 aa14□□□□□ -0.17
SIX4-201ENST00000216513 SAMD11Q96NU1 681 aa14□□□□□ -0.17
SIX4-201ENST00000216513 HSD17B14Q9BPX1 270 aa14□□□□□ -0.17
SIX4-201ENST00000216513 WRAP53Q9BUR4 548 aaKnown RBP14□□□□□ -0.17
SIX4-201ENST00000216513 CLIC5Q9NZA1 410 aa14□□□□□ -0.17
SIX4-201ENST00000216513 CPED1A4D0V7 1026 aa14□□□□□ -0.17
SIX4-201ENST00000216513 SYCE1LA8MT33 242 aa14□□□□□ -0.17
SIX4-201ENST00000216513 MAGEC1O60732 1142 aa14□□□□□ -0.17
SIX4-201ENST00000216513 KRT4P19013 534 aa14□□□□□ -0.17
SIX4-201ENST00000216513 MIPP30301 263 aa14□□□□□ -0.17
SIX4-201ENST00000216513 ZNF655Q8N720 491 aaPredicted RBP14□□□□□ -0.17
SIX4-201ENST00000216513 CASKIN2Q8WXE0 1202 aa14□□□□□ -0.17
SIX4-201ENST00000216513 KAT5Q92993 513 aa14□□□□□ -0.17
SIX4-201ENST00000216513 DCTN3O75935 186 aa14□□□□□ -0.17
SIX4-201ENST00000216513 C22orf31O95567 290 aa14□□□□□ -0.17
SIX4-201ENST00000216513 SKP1P63208 163 aa14□□□□□ -0.17
SIX4-201ENST00000216513 FAM182AQ5T1J6 154 aa14□□□□□ -0.17
SIX4-201ENST00000216513 ADNPQ9H2P0 1102 aa14□□□□□ -0.17
SIX4-201ENST00000216513 IMP3Q9NV31 184 aaKnown RBP14□□□□□ -0.17
SIX4-201ENST00000216513 CTNNAL1Q9UBT7 734 aa14□□□□□ -0.17
SIX4-201ENST00000216513 ANGPTL2Q9UKU9 493 aa14□□□□□ -0.17
SIX4-201ENST00000216513 VAV3Q9UKW4 847 aa14□□□□□ -0.17
SIX4-201ENST00000216513 PADI4Q9UM07 663 aa14□□□□□ -0.17
SIX4-201ENST00000216513 CA3P07451 260 aa14□□□□□ -0.17
SIX4-201ENST00000216513 SNHG28P0DPA3 235 aa14□□□□□ -0.17
SIX4-201ENST00000216513 MAXP61244 160 aa14□□□□□ -0.17
SIX4-201ENST00000216513 CNTN1Q12860 1018 aa14□□□□□ -0.17
SIX4-201ENST00000216513 GPR88Q9GZN0 384 aa14□□□□□ -0.17
SIX4-201ENST00000216513 HCN4Q9Y3Q4 1203 aa14□□□□□ -0.17
SIX4-201ENST00000216513 AFDNP55196 1824 aaKnown RBP14□□□□□ -0.17
SIX4-201ENST00000216513 ATG13O75143 517 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 MRPS5P82675 430 aaKnown RBP13.99□□□□□ -0.17
SIX4-201ENST00000216513 HSPA14Q0VDF9 509 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 CLYBLQ8N0X4 340 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 ZNF473Q8WTR7 871 aaKnown RBP13.99□□□□□ -0.17
SIX4-201ENST00000216513 C7orf43Q8WVR3 580 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 MTBPQ96DY7 904 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 ACTR8Q9H981 624 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 RPS6KB2Q9UBS0 482 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 STARD13Q9Y3M8 1113 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 FAM32AQ9Y421 112 aaKnown RBP13.99□□□□□ -0.17
SIX4-201ENST00000216513 MGAT4DA6NG13 374 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 ZNF839A8K0R7 811 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 H3BM21 787 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 TPST1O60507 370 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 SLC25A14O95258 325 aaPredicted RBP13.99□□□□□ -0.17
SIX4-201ENST00000216513 UGT2B4P06133 528 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 GMLQ99445 158 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 STX18Q9P2W9 335 aaKnown RBP13.99□□□□□ -0.17
SIX4-201ENST00000216513 RNF103O00237 685 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 XPO1O14980 1071 aaKnown RBP13.99□□□□□ -0.17
SIX4-201ENST00000216513 KATNA1O75449 491 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 CFHP08603 1231 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 MTHFRP42898 656 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 MAPK8P45983 427 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 HSP90AA5PQ58FG0 334 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 WDR59Q6PJI9 974 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 MYCBPAPQ8TBZ2 947 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 HTR3CQ8WXA8 447 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 GPAMQ9HCL2 828 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 AGO1Q9UL18 857 aaKnown RBP13.99□□□□□ -0.17
SIX4-201ENST00000216513 PEAK1Q9H792 1746 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 H3BQ06 376 aaPredicted RBP13.99□□□□□ -0.17
SIX4-201ENST00000216513 PJA2O43164 708 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 TARSP26639 723 aaKnown RBP13.99□□□□□ -0.17
SIX4-201ENST00000216513 FOXM1Q08050 763 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 DNAJC3Q13217 504 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 LINGO4Q6UY18 593 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 ZNF571Q7Z3V5 609 aaPredicted RBP13.99□□□□□ -0.17
SIX4-201ENST00000216513 FEM1CQ96JP0 617 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 RIC8BQ9NVN3 520 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 INVSQ9Y283 1065 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 PIRTP0C851 137 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 GUCA1AP43080 201 aaPredicted RBP13.99□□□□□ -0.17
SIX4-201ENST00000216513 MAGEA4P43358 317 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 PGS1Q32NB8 556 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 SLC13A5Q86YT5 568 aaPredicted RBP13.99□□□□□ -0.17
SIX4-201ENST00000216513 PHYKPLQ8IUZ5 450 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.99□□□□□ -0.17
SIX4-201ENST00000216513 THTPAQ9BU02 230 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 ABCG8Q9H221 673 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 ZNF112Q9UJU3 913 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 LZTS1Q9Y250 596 aa13.99□□□□□ -0.17
SIX4-201ENST00000216513 ATRNL1Q5VV63 1379 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 MON2Q7Z3U7 1717 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 SLC35G4P0C7Q5 338 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 GZMAP12544 262 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 COILP38432 576 aaPredicted RBP13.98□□□□□ -0.17
SIX4-201ENST00000216513 HSPA9P38646 679 aaKnown RBP13.98□□□□□ -0.17
SIX4-201ENST00000216513 CSHL1Q14406 222 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 CHI3L2Q15782 390 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 TTC39BQ5VTQ0 682 aaPredicted RBP13.98□□□□□ -0.17
SIX4-201ENST00000216513 C11orf63Q6NUN7 778 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 DNAJB7Q7Z6W7 309 aaPredicted RBP13.98□□□□□ -0.17
SIX4-201ENST00000216513 STRA8Q7Z7C7 330 aa13.98□□□□□ -0.17
SIX4-201ENST00000216513 B4GALNT2Q8NHY0 566 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms