RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Smok3cA0A087WSF2 504 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Pcdh7A0A0A6YY83 1255 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Gpr25P0C5I1 358 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Crabp2P22935 138 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 PfkmP47857 780 aaKnown RBP18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 PolgP54099 1218 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Grid2ipQ0QWG9 1203 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Trim71Q1PSW8 855 aaKnown RBP18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Mcm9Q2KHI9 1134 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Rnf220Q6PDX6 566 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 DcstampQ7TNJ0 470 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Gtf2a2Q80ZM7 109 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Slc2a12Q8BFW9 622 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Cgrrf1Q8BMJ7 332 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Tmem74Q8BQU7 305 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Q8CCC3 530 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Gsto2Q8K2Q2 248 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Plekhh3Q8VCE9 796 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 MiosQ8VE19 875 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Ttc30a1Q99J38 664 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 NonoQ99K48 473 aaKnown RBP18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Sytl1Q99N80 567 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 CabyrQ9D424 453 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Tbc1d20Q9D9I4 402 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Efhc1Q9D9T8 648 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Serpinb9bQ9DAV6 377 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Gfra4Q9JJT2 260 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Stap1Q9JM90 297 aaKnown RBP18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Angptl2Q9R045 493 aa18.69■□□□□ 0.58
Trim47-202ENSMUST00000106441 Pex10B1AUE5 324 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 UprtB1AVZ0 310 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Osbpl8B9EJ86 889 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Cyp2b23E9Q593 491 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 CblP22682 913 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Dpep1P31428 410 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Smpd1Q04519 627 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 E330034G19RikQ3UWX6 351 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Proser1Q5PRE5 913 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Il17aQ62386 158 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Fam107aQ78TU8 144 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Cdkn3Q810P3 211 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Dis3lQ8C0S1 1053 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Pacs1Q8K212 961 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Prpf39Q8K2Z2 665 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Thg1lQ9CY52 298 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Utp11Q9CZJ1 253 aaKnown RBP18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Tmbim4Q9DA39 238 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Fbxo17Q9QZM8 286 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Map7d3A2AEY4 876 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Atf6F6VAN0 656 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 BpgmP15327 259 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Tbxas1P36423 533 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Rpl26P61255 145 aaKnown RBP18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Thumpd3P97770 505 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Tbx10Q810F8 385 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Aste1Q8BIR2 672 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Tp53inp2Q8CFU8 221 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Acvr1cQ8K348 493 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Dedd2Q8QZV0 330 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Ddx50Q99MJ9 734 aaKnown RBP18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Mrps17Q9CQE3 120 aaKnown RBP18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Ndufaf1Q9CWX2 328 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Slc34a2Q9DBP0 697 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Ube4bQ9ES00 1173 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Ccr10Q9JL21 362 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Spag6Q9JLI7 507 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 St6galnac4Q9R2B6 360 aa18.68■□□□□ 0.58
Trim47-202ENSMUST00000106441 Myo16Q5DU14 1919 aa18.67■□□□□ 0.58
Trim47-202ENSMUST00000106441 Gm6657A0A1B0GRJ3 277 aa18.67■□□□□ 0.58
Trim47-202ENSMUST00000106441 JchainP01592 159 aa18.67■□□□□ 0.58
Trim47-202ENSMUST00000106441 Kcnj6P48542 425 aa18.67■□□□□ 0.58
Trim47-202ENSMUST00000106441 Rpl10aP53026 217 aaKnown RBP18.67■□□□□ 0.58
Trim47-202ENSMUST00000106441 Cd163Q2VLH6 1121 aa18.67■□□□□ 0.58
Trim47-202ENSMUST00000106441 Sp140Q6NSQ5 534 aa18.67■□□□□ 0.58
Trim47-202ENSMUST00000106441 Lrrc27Q80YS5 523 aa18.67■□□□□ 0.58
Trim47-202ENSMUST00000106441 Ca12Q8CI85 354 aa18.67■□□□□ 0.58
Trim47-202ENSMUST00000106441 DarsQ922B2 501 aaKnown RBP18.67■□□□□ 0.58
Trim47-202ENSMUST00000106441 Nme5Q99MH5 211 aa18.67■□□□□ 0.58
Trim47-202ENSMUST00000106441 Acbd6Q9D061 282 aa18.67■□□□□ 0.58
Trim47-202ENSMUST00000106441 Tubgcp4Q9D4F8 667 aa18.67■□□□□ 0.58
Trim47-202ENSMUST00000106441 4931406B18RikA2RSL7 367 aa18.66■□□□□ 0.58
Trim47-202ENSMUST00000106441 Mfsd4b4J3QNS5 503 aa18.66■□□□□ 0.58
Trim47-202ENSMUST00000106441 Pik3r2O08908 722 aa18.66■□□□□ 0.58
Trim47-202ENSMUST00000106441 Vmn2r1O70410 912 aa18.66■□□□□ 0.58
Trim47-202ENSMUST00000106441 LgmnO89017 435 aa18.66■□□□□ 0.58
Trim47-202ENSMUST00000106441 ChgbP16014 677 aa18.66■□□□□ 0.58
Trim47-202ENSMUST00000106441 Psma2P49722 234 aa18.66■□□□□ 0.58
Trim47-202ENSMUST00000106441 Q14AM7 275 aa18.66■□□□□ 0.58
Trim47-202ENSMUST00000106441 Meaf6Q2VPQ9 191 aa18.66■□□□□ 0.58
Trim47-202ENSMUST00000106441 Glis1Q8K1M4 789 aa18.66■□□□□ 0.58
Trim47-202ENSMUST00000106441 Olfr784Q8VFZ9 319 aa18.66■□□□□ 0.58
Trim47-202ENSMUST00000106441 Olfr30Q8VGD8 315 aa18.66■□□□□ 0.58
Trim47-202ENSMUST00000106441 Ndufa10Q99LC3 355 aaKnown RBP18.66■□□□□ 0.58
Trim47-202ENSMUST00000106441 Gstt4Q9D4P7 240 aa18.66■□□□□ 0.58
Trim47-202ENSMUST00000106441 Pgam1Q9DBJ1 254 aa18.66■□□□□ 0.58
Trim47-202ENSMUST00000106441 Doc2gQ9ESN1 387 aa18.66■□□□□ 0.58
Trim47-202ENSMUST00000106441 Extl1Q9JKV7 669 aa18.66■□□□□ 0.58
Trim47-202ENSMUST00000106441 Mtm1Q9Z2C5 603 aa18.66■□□□□ 0.58
Trim47-202ENSMUST00000106441 Fam81bA0A140LI28 432 aa18.66■□□□□ 0.58
Trim47-202ENSMUST00000106441 Gm45713A0A1B0GS68 446 aa18.66■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms