RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Abcb1aP21447 1276 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Ptpn6P29351 595 aaKnown RBP9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Bdkrb2P32299 392 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Cyp2f2P33267 491 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 ArsaP50428 506 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 PrkczQ02956 592 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Hddc2Q3SXD3 199 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Nt5c3bQ3UFY7 300 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Mief2Q5NCS9 454 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 StyxQ60969 223 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Itga6Q61739 1091 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Cd34Q64314 382 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Cyp4x1Q6A152 507 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 AtminQ6P9S1 818 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Sept9Q80UG5 583 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Smndc1Q8BGT7 238 aaKnown RBP9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 SowahaQ8BLS7 548 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Dnaaf2Q8BPI1 814 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 NkrfQ8BY02 690 aaKnown RBP9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Ddx19bQ8BZY3 494 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gle1Q8R322 699 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Pcdha10Q91Y20 946 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Coa7Q921H9 231 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Spdl1Q923A2 608 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Igf2bp3Q9CPN8 579 aaKnown RBP9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Slc35a4Q9D321 324 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Atp5oQ9DB20 213 aaKnown RBP9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 MvpQ9EQK5 861 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Tlr9Q9EQU3 1032 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Dapp1Q9QXT1 280 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Tll2Q9WVM6 1012 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Sumo3Q9Z172 110 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 AspgA0JNU3 564 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Tyw5A2RSX7 315 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 CercamA3KGW5 592 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Kcna10B2RQA1 511 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 JrklB2RRL2 523 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Znf382B2RXC5 579 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Fam151bD3YUE4 279 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Abcb1bP06795 1276 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Chmp6P0C0A3 200 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gadd45bP22339 160 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 RarbP22605 482 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Tsta3P23591 321 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Vamp2P63044 116 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Crnkl1P63154 690 aaKnown RBP9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Polr2cP97760 275 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Wdr41Q3UDP0 460 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Doc2aQ7TNF0 405 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Rnf24Q8BGI1 148 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Ttc36Q8VBW8 186 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Olfr461Q8VF30 313 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 NsmfQ99NF2 532 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Tor3aQ9ER38 385 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Copb1Q9JIF7 953 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gbp2Q9Z0E6 589 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Il18rapQ9Z2B1 614 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Spef2Q8C9J3 1734 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Pitpnm2Q6ZPQ6 1335 aa9.28□□□□□ -0.92
Upf3b-201ENSMUST00000076265 1700016G14RikA0A286YCZ6 238 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm7929A0A286YDV3 213 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Esp6A8R0U0 136 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Lrrc73B2RWC4 316 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm3015F6ZAP6 213 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm7954F7BAX1 213 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gm7942L7N277 499 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Myo1aO88329 1043 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Kcnj5P48545 419 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Tspan5P62080 268 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Abi2P62484 446 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 FapP97321 761 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 B4galnt2Q09199 510 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Zmym1Q3TJB1 983 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Spata5Q3UMC0 893 aaKnown RBP9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Gp49aQ61450 303 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Has1Q61647 583 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Eif2b4Q61749 524 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Zfp90Q61967 636 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Q7TT23 1179 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Ranbp6Q8BIV3 1105 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Tyw1Q8BJM7 721 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Rcn2Q8BP92 320 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Usp44Q8C2S0 711 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Q8C708 225 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Appl1Q8K3H0 707 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Ubqln1Q8R317 582 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Dhrs1Q99L04 313 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 QpctQ9CYK2 362 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Wdr89Q9D0R9 386 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Ccdc105Q9D4K7 499 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Epm2aQ9WUA5 330 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Kcnk7Q9Z2T1 307 aa9.27□□□□□ -0.92
Upf3b-201ENSMUST00000076265 Kiaa1107Q80TK0 1369 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Olfr625-ps1A0A140T8L4 321 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Ism1A2ATD1 454 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Sult6b2B7ZWN4 290 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 FanceB8JJD6 213 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Scgb2b7D3YYY1 112 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 Zfp963D3Z2T8 383 aa9.27□□□□□ -0.93
Upf3b-201ENSMUST00000076265 A530032D15RikE9Q422 215 aa9.27□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 34.9 ms