RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Proser1Q5PRE5 913 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Nab1Q61122 486 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Trit1Q80UN9 467 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Plcl2Q8K394 1128 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Trub2Q91WG3 331 aaKnown RBP12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 FignQ9ERZ6 759 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Rgs5O08850 181 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Rdh7O88451 316 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Rpl5P47962 297 aaKnown RBP12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Arhgap28Q8BN58 729 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Kcnq3Q8K3F6 873 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Ddx50Q99MJ9 734 aaKnown RBP12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Gtf2ird2Q99NI3 936 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Snx10Q9CWT3 201 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Prg3Q9JL95 222 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Zfp358E9Q8M1 571 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Mapkapk2P49138 386 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Lpcat1Q3TFD2 534 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 3830417A13RikQ8BQJ2 303 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Camk1dQ8BW96 385 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Dusp19Q8K4T5 220 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Tdrd12Q9CWU0 1215 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Tmem176aQ9DCS1 244 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Bpifb9bA2AJD1 591 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Olfr220E9Q050 325 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Adam15O88839 864 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Ag2Q3UPL5 249 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Smarcd1Q61466 515 aaKnown RBP12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Mrps31Q61733 384 aaKnown RBP12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Bpifb9aQ80XI7 591 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Ago4Q8CJF8 861 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Sept12Q9D451 317 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 BcamQ9R069 622 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 Iqgap3F8VQ29 1632 aa12.13□□□□□ -0.47
Trim56-201ENSMUST00000054384 CercamA3KGW5 592 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Ttll8A4Q9F1 832 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 MttpO08601 894 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Erbb2P70424 1256 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Bend6Q6PFX2 281 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Pcdh19Q80TF3 1145 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Zdhhc17Q80TN5 632 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Rab11fip1Q9D620 645 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Tysnd1Q9DBA6 568 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Cables1Q9ESJ1 568 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Klhl4B1AZR0 717 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Gm6811E9Q3Y8 510 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Slc20a2Q80UP8 656 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Srrm3Q80WV7 648 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Camta2Q80Y50 1208 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Ubp1Q811S7 540 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Zfp57Q8C6P8 421 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Gm14781A2A9Q9 366 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Gm7945F6QI24 236 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Tas2r104Q7M723 302 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Olfr1057Q7TR75 315 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Q810S2 196 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Tarsl2Q8BLY2 790 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Pgm5Q8BZF8 567 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Ndufs1Q91VD9 727 aaKnown RBP12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Hipk3Q9ERH7 1192 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Git2Q9JLQ2 708 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Vmn2r25W4VSP2 855 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Spata6lB2RV46 347 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Alox12P39655 663 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Pon1P52430 355 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Rbbp4Q60972 425 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Phc1Q64028 1012 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Tmem39bQ810L4 492 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Rbm22Q8BHS3 420 aaKnown RBP12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Kiaa0319lQ8K135 1048 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Epb41l1Q9Z2H5 879 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Pitpnm2Q6ZPQ6 1335 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 4933408B17RikG3X9B4 273 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Serac1Q3U213 654 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Fam214aQ69ZK7 1075 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Larp4bQ6A0A2 741 aaKnown RBP12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 S100a15aQ6S5I3 108 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Klhl26Q8BGY4 606 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Elmo3Q8BYZ7 720 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Angel1Q8VCU0 667 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Aldh9a1Q9JLJ2 494 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Nkx2-5P42582 318 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Plk1Q07832 603 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 YdjcQ14BV6 310 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Glt6d1Q2NKH9 311 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Fam129aQ3UW53 926 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Olfr1037Q7TR84 321 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Psmd11Q8BG32 422 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Stard13Q923Q2 1113 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Tbx20Q9ES03 445 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Hey2Q9QUS4 339 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Magea1O89006 320 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Magea5O89009 320 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Ptpn11P35235 597 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 AcadmP45952 421 aaKnown RBP12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Grin2cQ01098 1239 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 RogdiQ3TDK6 287 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Otol1Q4ZJM7 482 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Senp5Q6NXL6 749 aa12.12□□□□□ -0.47
Trim56-201ENSMUST00000054384 Stk40Q7TNL3 435 aa12.12□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 51 ms