RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Gm8271L7N2E2 218 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Matn2O08746 956 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Cd4P06332 457 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Erp29P57759 262 aaKnown RBP11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Ranbp9P69566 653 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Htr4P97288 388 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Nfatc3P97305 1075 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Cd36Q08857 472 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Pag1Q3U1F9 429 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Stip1Q60864 543 aaKnown RBP11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Olfml2aQ8BHP7 681 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Osbpl2Q8BX94 484 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Samd3Q8C4H2 520 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Kctd20Q8CDD8 419 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Nsmce2Q91VT1 247 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Dlg2Q91XM9 852 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Polr3fQ921X6 316 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Tor1bQ9ER41 336 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Tbk1Q9WUN2 729 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Sult2a3D3Z1W5 285 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 CfhP06909 1234 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Krt13P08730 437 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Bmp4P21275 408 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Dppa5bP85965 119 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Tgfbrap1Q3UR70 860 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Nxpe4Q52KP5 543 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Gm5431Q5NCB3 844 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 9930111J21Rik1Q5SVP0 844 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Nfe2l1Q61985 741 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Cyp3a11Q64459 504 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Txndc15Q6P6J9 344 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Rundc3bQ6PDC0 408 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Dtx3Q80V91 347 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Efr3aQ8BG67 819 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Dus1lQ8C2P3 475 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Leg1Q8C6C9 337 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 DnerQ8JZM4 737 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 AdigQ8R400 80 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Gmpr2Q99L27 348 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Hnrnpa0Q9CX86 305 aaKnown RBP11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Rin2Q9D684 903 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 1700016D06RikQ9DAA5 166 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Rad9aQ9Z0F6 389 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Arid3bQ9Z1N7 568 aa11.74□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Gbp4A4UUI3 631 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Slc9a3G3X939 829 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Pik3r2O08908 722 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Pcsk2P21661 637 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Arpp19P56212 112 aaKnown RBP11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Nr1h4Q60641 488 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Ddx55Q6ZPL9 600 aaKnown RBP11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 BspryQ80YW5 473 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 NrcamQ810U4 1256 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 EtnpplQ8BWU8 499 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Klhl11Q8CE33 709 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 ManbaQ8K2I4 879 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Etv3Q8R4Z4 513 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Acot11Q8VHQ9 594 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Wrnip1Q91XU0 660 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Pcdhb18Q91Y02 792 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Cdc26Q99JP4 85 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Sppl3Q9CUS9 384 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Nt5c3aQ9D020 331 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Q9D1K7 174 aaKnown RBP11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Astn1Q61137 1302 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Disp2Q8CIP5 1345 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Cyp2t4E9PWV0 503 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Cd70O55237 195 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 DcxO88809 366 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Rph3aP47708 681 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 LeprP48356 1162 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Nploc4P60670 608 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Lypla1P97823 230 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Gm3414Q3TNU4 584 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Krt26Q3TRJ4 462 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Hexim2Q3TVI4 313 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Trappc9Q3U0M1 1148 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Frmd8Q3UFK8 466 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Krt72Q6IME9 520 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Sp140Q6NSQ5 534 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Gbp5Q8CFB4 590 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Ppp1r16bQ8VHQ3 568 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 PompQ9CQT5 141 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Dis3Q9CSH3 958 aaKnown RBP11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 H2bfmQ9DAB5 224 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Anxa9Q9JHQ0 345 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Map7d3A2AEY4 876 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Gm4841E9QAA8 417 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Gm21973F6WEZ7 68 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 MntO08789 591 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 St3gal1P54751 337 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Grid2ipQ0QWG9 1203 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Mapre1Q61166 268 aaKnown RBP11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Glra2Q7TNC8 452 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Tmcc2Q80W04 706 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Anapc2Q8BZQ7 837 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Nrn1lQ8C4W3 162 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Gnl3Q8CI11 538 aaKnown RBP11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Cpa5Q8R4H4 436 aa11.73□□□□□ -0.53
Sdc1-201ENSMUST00000020911 Mta3Q924K8 591 aa11.73□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 33.8 ms