RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 PLK1P53350 603 aa12.64□□□□□ -0.39
LINC00339-213ENST00000642137 KLF1Q13351 362 aaPredicted RBP12.64□□□□□ -0.39
LINC00339-213ENST00000642137 CDH18Q13634 790 aa12.64□□□□□ -0.39
LINC00339-213ENST00000642137 POLD3Q15054 466 aaPredicted RBP12.64□□□□□ -0.39
LINC00339-213ENST00000642137 LLGL1Q15334 1064 aa12.64□□□□□ -0.39
LINC00339-213ENST00000642137 FSCBQ5H9T9 825 aa12.64□□□□□ -0.39
LINC00339-213ENST00000642137 AFMIDQ63HM1 303 aa12.64□□□□□ -0.39
LINC00339-213ENST00000642137 TFAP2DQ7Z6R9 452 aa12.64□□□□□ -0.39
LINC00339-213ENST00000642137 RNF135Q8IUD6 432 aa12.64□□□□□ -0.39
LINC00339-213ENST00000642137 LRRC49Q8IUZ0 686 aa12.64□□□□□ -0.39
LINC00339-213ENST00000642137 GJD3Q8N144 294 aa12.64□□□□□ -0.39
LINC00339-213ENST00000642137 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.64□□□□□ -0.39
LINC00339-213ENST00000642137 NAT16Q8N8M0 369 aa12.64□□□□□ -0.39
LINC00339-213ENST00000642137 TTC13Q8NBP0 860 aa12.64□□□□□ -0.39
LINC00339-213ENST00000642137 TTC8Q8TAM2 541 aa12.64□□□□□ -0.39
LINC00339-213ENST00000642137 ZNF592Q92610 1267 aa12.64□□□□□ -0.39
LINC00339-213ENST00000642137 BHMTQ93088 406 aa12.64□□□□□ -0.39
LINC00339-213ENST00000642137 EXOC4Q96A65 974 aa12.64□□□□□ -0.39
LINC00339-213ENST00000642137 MSANTD3Q96H12 275 aa12.64□□□□□ -0.39
LINC00339-213ENST00000642137 LMLNQ96KR4 655 aa12.64□□□□□ -0.39
LINC00339-213ENST00000642137 NAP1L3Q99457 506 aaPredicted RBP12.64□□□□□ -0.39
LINC00339-213ENST00000642137 HERPUD2Q9BSE4 406 aa12.64□□□□□ -0.39
LINC00339-213ENST00000642137 SLC39A8Q9C0K1 460 aa12.64□□□□□ -0.39
LINC00339-213ENST00000642137 LRRC19Q9H756 370 aa12.64□□□□□ -0.39
LINC00339-213ENST00000642137 DUSP12Q9UNI6 340 aa12.64□□□□□ -0.39
LINC00339-213ENST00000642137 SLC27A6Q9Y2P4 619 aa12.64□□□□□ -0.39
LINC00339-213ENST00000642137 TICRRQ7Z2Z1 1910 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.63□□□□□ -0.39
LINC00339-213ENST00000642137 ZNF185O15231 689 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 NCAM2O15394 837 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 NARSO43776 548 aaKnown RBP12.63□□□□□ -0.39
LINC00339-213ENST00000642137 RAMP2O60895 175 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 TULP3O75386 442 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 FGGP02679 453 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 RHOCP08134 193 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 ETFBP38117 255 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 OPRD1P41143 372 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 PAFAH1B1P43034 410 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 SLC6A11P48066 632 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 DGKGP49619 791 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 GNA12Q03113 381 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 LMAN2Q12907 356 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 SLC10A2Q12908 348 aaPredicted RBP12.63□□□□□ -0.39
LINC00339-213ENST00000642137 DMC1Q14565 340 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 LONRF2Q1L5Z9 754 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 PARP15Q460N3 678 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 SLC44A4Q53GD3 710 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 TJAP1Q5JTD0 557 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 RNF219Q5W0B1 726 aaPredicted RBP12.63□□□□□ -0.39
LINC00339-213ENST00000642137 CXorf57Q6NSI4 855 aaKnown RBP12.63□□□□□ -0.39
LINC00339-213ENST00000642137 RALGPS2Q86X27 583 aaPredicted RBP12.63□□□□□ -0.39
LINC00339-213ENST00000642137 CREG2Q8IUH2 290 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 ARHGAP12Q8IWW6 846 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 SUGP1Q8IWZ8 645 aaKnown RBP12.63□□□□□ -0.39
LINC00339-213ENST00000642137 WFDC5Q8TCV5 224 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 P3H4Q92791 437 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 ARHGEF2Q92974 986 aaKnown RBP12.63□□□□□ -0.39
LINC00339-213ENST00000642137 ALG14Q96F25 216 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 MS4A14Q96JA4 679 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 PNKPQ96T60 521 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 FEM1AQ9BSK4 669 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 FRMD8P1Q9BZ68 369 aaPredicted RBP12.63□□□□□ -0.39
LINC00339-213ENST00000642137 NOL6Q9H6R4 1146 aaKnown RBP12.63□□□□□ -0.39
LINC00339-213ENST00000642137 DEC1Q9P2X7 70 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 MFHAS1Q9Y4C4 1052 aa12.63□□□□□ -0.39
LINC00339-213ENST00000642137 CXorf51AA0A1B0GTR3 108 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 ARHGAP42A6NI28 874 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 RASA4BC9J798 803 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 SPECC1L-ADORA2AF8WAN1 911 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 RASA4O43374 803 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 TIMM44O43615 452 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 URI1O94763 535 aaPredicted RBP12.62□□□□□ -0.39
LINC00339-213ENST00000642137 MX2P20592 715 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 HLA-FP30511 346 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 GALK1P51570 392 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 DYNLT1P63172 113 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 XRCC4Q13426 336 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 CCDC181Q5TID7 509 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 ASTLQ6HA08 431 aaPredicted RBP12.62□□□□□ -0.39
LINC00339-213ENST00000642137 GRAMD4Q6IC98 578 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 C1orf228Q6PIY5 440 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 NPNTQ6UXI9 565 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 NUDT18Q6ZVK8 323 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 C12orf40Q86WS4 652 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 UBALD2Q8IYN6 164 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 NPWQ8N729 165 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 OR52K2Q8NGK3 314 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 WFIKKN2Q8TEU8 576 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 CHFRQ96EP1 664 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 CELF6Q96J87 481 aaKnown RBP12.62□□□□□ -0.39
LINC00339-213ENST00000642137 ACE2Q9BYF1 805 aaPredicted RBP12.62□□□□□ -0.39
LINC00339-213ENST00000642137 BRD8Q9H0E9 1235 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 HEBP1Q9NRV9 189 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 HOMER3Q9NSC5 361 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 ABCB8Q9NUT2 735 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 DNAJC17Q9NVM6 304 aaKnown RBP12.62□□□□□ -0.39
LINC00339-213ENST00000642137 DTLQ9NZJ0 730 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 WNT16Q9UBV4 365 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 CDC23Q9UJX2 597 aa12.62□□□□□ -0.39
LINC00339-213ENST00000642137 GGA2Q9UJY4 613 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms