RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 MAFKO60675 156 aa18.69■□□□□ 0.58
PHGDH-209ENST00000641074 RB1P06400 928 aa18.69■□□□□ 0.58
PHGDH-209ENST00000641074 TPSB2P20231 275 aa18.69■□□□□ 0.58
PHGDH-209ENST00000641074 CCNCP24863 283 aa18.69■□□□□ 0.58
PHGDH-209ENST00000641074 PSMB4P28070 264 aa18.69■□□□□ 0.58
PHGDH-209ENST00000641074 GABRR2P28476 465 aa18.69■□□□□ 0.58
PHGDH-209ENST00000641074 CORO1AP31146 461 aaKnown RBP18.69■□□□□ 0.58
PHGDH-209ENST00000641074 SLC6A4P31645 630 aa18.69■□□□□ 0.58
PHGDH-209ENST00000641074 SLC11A2P49281 568 aa18.69■□□□□ 0.58
PHGDH-209ENST00000641074 TPSAB1Q15661 275 aa18.69■□□□□ 0.58
PHGDH-209ENST00000641074 PARP6Q2NL67 630 aa18.69■□□□□ 0.58
PHGDH-209ENST00000641074 KRT71Q3SY84 523 aa18.69■□□□□ 0.58
PHGDH-209ENST00000641074 BBS9Q3SYG4 887 aa18.69■□□□□ 0.58
PHGDH-209ENST00000641074 TXNDC8Q6A555 127 aa18.69■□□□□ 0.58
PHGDH-209ENST00000641074 GAREM2Q75VX8 874 aa18.69■□□□□ 0.58
PHGDH-209ENST00000641074 CIR1Q86X95 450 aaPredicted RBP18.69■□□□□ 0.58
PHGDH-209ENST00000641074 ANKMY2Q8IV38 441 aa18.69■□□□□ 0.58
PHGDH-209ENST00000641074 MCUQ8NE86 351 aa18.69■□□□□ 0.58
PHGDH-209ENST00000641074 SLC22A17Q8WUG5 538 aa18.69■□□□□ 0.58
PHGDH-209ENST00000641074 WBP2Q969T9 261 aa18.69■□□□□ 0.58
PHGDH-209ENST00000641074 TTC25Q96NG3 672 aa18.69■□□□□ 0.58
PHGDH-209ENST00000641074 SERPINB12Q96P63 405 aa18.69■□□□□ 0.58
PHGDH-209ENST00000641074 IGSF9Q9P2J2 1179 aa18.69■□□□□ 0.58
PHGDH-209ENST00000641074 ZNF212Q9UDV6 495 aa18.69■□□□□ 0.58
PHGDH-209ENST00000641074 CHD7Q9P2D1 2997 aa18.69■□□□□ 0.58
PHGDH-209ENST00000641074 F5H5T6 163 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 AVILO75366 819 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 IRF1P10914 325 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 MBL2P11226 248 aaPredicted RBP18.68■□□□□ 0.58
PHGDH-209ENST00000641074 MAGEA10P43363 369 aaPredicted RBP18.68■□□□□ 0.58
PHGDH-209ENST00000641074 PAPOLAP51003 745 aaKnown RBP18.68■□□□□ 0.58
PHGDH-209ENST00000641074 NDST2P52849 883 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 TEX44Q53QW1 395 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 KCTD16Q68DU8 428 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 RFWD3Q6PCD5 774 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 CAND1Q86VP6 1230 aaKnown RBP18.68■□□□□ 0.58
PHGDH-209ENST00000641074 LGI2Q8N0V4 545 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 SHROOM3Q8TF72 1996 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 AZIN2Q96A70 460 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 ZFRQ96KR1 1074 aaKnown RBP18.68■□□□□ 0.58
PHGDH-209ENST00000641074 AGAP3Q96P47 875 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 VAT1Q99536 393 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 TMEM109Q9BVC6 243 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 FRMD8Q9BZ67 464 aaPredicted RBP18.68■□□□□ 0.58
PHGDH-209ENST00000641074 CENPHQ9H3R5 247 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 SMPD4Q9NXE4 827 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 DONSONQ9NYP3 566 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 MYO18AQ92614 2054 aaKnown RBP18.68■□□□□ 0.58
PHGDH-209ENST00000641074 OBSL1O75147 1896 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 CLUHO75153 1309 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 ZBTB24O43167 697 aaPredicted RBP18.68■□□□□ 0.58
PHGDH-209ENST00000641074 OLFM2O95897 454 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 JCHAINP01591 159 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 GYS2P54840 703 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 CYP4F8P98187 520 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 CBLBQ13191 982 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 C5orf22Q49AR2 442 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 ELMOD1Q8N336 334 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 ARL14EPQ8N8R7 260 aaPredicted RBP18.68■□□□□ 0.58
PHGDH-209ENST00000641074 PYROXD1Q8WU10 500 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 TRHDEQ9UKU6 1024 aa18.68■□□□□ 0.58
PHGDH-209ENST00000641074 CCL16O15467 120 aa18.67■□□□□ 0.58
PHGDH-209ENST00000641074 LPXNO60711 386 aa18.67■□□□□ 0.58
PHGDH-209ENST00000641074 ABHD2P08910 425 aa18.67■□□□□ 0.58
PHGDH-209ENST00000641074 HDCP19113 662 aa18.67■□□□□ 0.58
PHGDH-209ENST00000641074 CD68P34810 354 aaPredicted RBP18.67■□□□□ 0.58
PHGDH-209ENST00000641074 LMAN1P49257 510 aa18.67■□□□□ 0.58
PHGDH-209ENST00000641074 PPM1LQ5SGD2 360 aa18.67■□□□□ 0.58
PHGDH-209ENST00000641074 ZNF534Q76KX8 674 aa18.67■□□□□ 0.58
PHGDH-209ENST00000641074 LRRC49Q8IUZ0 686 aa18.67■□□□□ 0.58
PHGDH-209ENST00000641074 CFAP52Q8N1V2 620 aa18.67■□□□□ 0.58
PHGDH-209ENST00000641074 AGGF1Q8N302 714 aaeCLIP18.67■□□□□ 0.58
PHGDH-209ENST00000641074 PDCD7Q8N8D1 485 aaKnown RBP18.67■□□□□ 0.58
PHGDH-209ENST00000641074 FBXO36Q8NEA4 188 aa18.67■□□□□ 0.58
PHGDH-209ENST00000641074 EPS8L3Q8TE67 593 aaKnown RBP18.67■□□□□ 0.58
PHGDH-209ENST00000641074 ATP6V1G3Q96LB4 118 aa18.67■□□□□ 0.58
PHGDH-209ENST00000641074 TEKT5Q96M29 485 aa18.67■□□□□ 0.58
PHGDH-209ENST00000641074 AGO1Q9UL18 857 aaKnown RBP18.67■□□□□ 0.58
PHGDH-209ENST00000641074 NYNRINQ9P2P1 1898 aaKnown RBP18.67■□□□□ 0.58
PHGDH-209ENST00000641074 CHD9Q3L8U1 2897 aa18.66■□□□□ 0.58
PHGDH-209ENST00000641074 TLDC2A0PJX2 215 aa18.66■□□□□ 0.58
PHGDH-209ENST00000641074 GOLGA6CA6NDK9 693 aa18.66■□□□□ 0.58
PHGDH-209ENST00000641074 NRG2O14511 850 aaPredicted RBP18.66■□□□□ 0.58
PHGDH-209ENST00000641074 MATN3O15232 486 aa18.66■□□□□ 0.58
PHGDH-209ENST00000641074 GOLGA6DP0CG33 693 aa18.66■□□□□ 0.58
PHGDH-209ENST00000641074 CCNB1P14635 433 aa18.66■□□□□ 0.58
PHGDH-209ENST00000641074 GRIA1P42261 906 aa18.66■□□□□ 0.58
PHGDH-209ENST00000641074 IGDCC3Q8IVU1 814 aa18.66■□□□□ 0.58
PHGDH-209ENST00000641074 SH2D3CQ8N5H7 860 aa18.66■□□□□ 0.58
PHGDH-209ENST00000641074 CNTD1Q8N815 330 aa18.66■□□□□ 0.58
PHGDH-209ENST00000641074 USP33Q8TEY7 942 aa18.66■□□□□ 0.58
PHGDH-209ENST00000641074 MRPS31Q92665 395 aaKnown RBP18.66■□□□□ 0.58
PHGDH-209ENST00000641074 HMCESQ96FZ2 354 aa18.66■□□□□ 0.58
PHGDH-209ENST00000641074 TGS1Q96RS0 853 aaKnown RBP18.66■□□□□ 0.58
PHGDH-209ENST00000641074 GORASP1Q9BQQ3 440 aa18.66■□□□□ 0.58
PHGDH-209ENST00000641074 CORO1BQ9BR76 489 aa18.66■□□□□ 0.58
PHGDH-209ENST00000641074 EIF2B3Q9NR50 452 aaKnown RBP18.66■□□□□ 0.58
PHGDH-209ENST00000641074 GOLGA6AQ9NYA3 693 aa18.66■□□□□ 0.58
PHGDH-209ENST00000641074 RSPH14Q9UHP6 348 aa18.66■□□□□ 0.58
PHGDH-209ENST00000641074 IPO11Q9UI26 975 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms