RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 PDGFRAP16234 1089 aa15.51■□□□□ 0.07
SYNE2-228ENST00000639659 NNMTP40261 264 aa15.51■□□□□ 0.07
SYNE2-228ENST00000639659 DAB2P98082 770 aa15.51■□□□□ 0.07
SYNE2-228ENST00000639659 ACCSLQ4AC99 568 aa15.51■□□□□ 0.07
SYNE2-228ENST00000639659 PKDCCQ504Y2 493 aa15.51■□□□□ 0.07
SYNE2-228ENST00000639659 TAC4Q86UU9 113 aa15.51■□□□□ 0.07
SYNE2-228ENST00000639659 SPATS2Q86XZ4 545 aaKnown RBP15.51■□□□□ 0.07
SYNE2-228ENST00000639659 SCML4Q8N228 414 aa15.51■□□□□ 0.07
SYNE2-228ENST00000639659 PPM1KQ8N3J5 372 aa15.51■□□□□ 0.07
SYNE2-228ENST00000639659 SLC35F5Q8WV83 523 aa15.51■□□□□ 0.07
SYNE2-228ENST00000639659 LGMNQ99538 433 aa15.51■□□□□ 0.07
SYNE2-228ENST00000639659 NRSN2Q9GZP1 204 aa15.51■□□□□ 0.07
SYNE2-228ENST00000639659 GOLPH3LQ9H4A5 285 aa15.51■□□□□ 0.07
SYNE2-228ENST00000639659 TLR6Q9Y2C9 796 aa15.51■□□□□ 0.07
SYNE2-228ENST00000639659 SYNJ2BP-COX16A0A087WUM0 186 aa15.5■□□□□ 0.07
SYNE2-228ENST00000639659 SLC16A3O15427 465 aaKnown RBP15.5■□□□□ 0.07
SYNE2-228ENST00000639659 FFAR2O15552 330 aa15.5■□□□□ 0.07
SYNE2-228ENST00000639659 FBXO21O94952 628 aa15.5■□□□□ 0.07
SYNE2-228ENST00000639659 PAEPP09466 180 aa15.5■□□□□ 0.07
SYNE2-228ENST00000639659 CKMT2P17540 419 aa15.5■□□□□ 0.07
SYNE2-228ENST00000639659 TACR2P21452 398 aa15.5■□□□□ 0.07
SYNE2-228ENST00000639659 ACTN2P35609 894 aa15.5■□□□□ 0.07
SYNE2-228ENST00000639659 PNOCQ13519 176 aa15.5■□□□□ 0.07
SYNE2-228ENST00000639659 ELAVL3Q14576 367 aaKnown RBP15.5■□□□□ 0.07
SYNE2-228ENST00000639659 STAT4Q14765 748 aa15.5■□□□□ 0.07
SYNE2-228ENST00000639659 RTP5Q14D33 572 aa15.5■□□□□ 0.07
SYNE2-228ENST00000639659 HS1BP3Q53T59 392 aa15.5■□□□□ 0.07
SYNE2-228ENST00000639659 GPR155Q7Z3F1 870 aa15.5■□□□□ 0.07
SYNE2-228ENST00000639659 ZNF605Q86T29 641 aa15.5■□□□□ 0.07
SYNE2-228ENST00000639659 UBR7Q8N806 425 aa15.5■□□□□ 0.07
SYNE2-228ENST00000639659 TSC1Q92574 1164 aa15.5■□□□□ 0.07
SYNE2-228ENST00000639659 FGF11Q92914 225 aa15.5■□□□□ 0.07
SYNE2-228ENST00000639659 PTPRN2Q92932 1015 aa15.5■□□□□ 0.07
SYNE2-228ENST00000639659 KAT5Q92993 513 aa15.5■□□□□ 0.07
SYNE2-228ENST00000639659 SNX21Q969T3 373 aa15.5■□□□□ 0.07
SYNE2-228ENST00000639659 AZIN2Q96A70 460 aa15.5■□□□□ 0.07
SYNE2-228ENST00000639659 NT5C1BQ96P26 610 aa15.5■□□□□ 0.07
SYNE2-228ENST00000639659 IRX2Q9BZI1 471 aaPredicted RBP15.5■□□□□ 0.07
SYNE2-228ENST00000639659 COX16Q9P0S2 106 aa15.5■□□□□ 0.07
SYNE2-228ENST00000639659 ARMCX3Q9UH62 379 aaPredicted RBP15.5■□□□□ 0.07
SYNE2-228ENST00000639659 KIAA1257Q9ULG3 409 aa15.5■□□□□ 0.07
SYNE2-228ENST00000639659 COQ4Q9Y3A0 265 aa15.5■□□□□ 0.07
SYNE2-228ENST00000639659 HELZ2Q9BYK8 2649 aaKnown RBP15.5■□□□□ 0.07
SYNE2-228ENST00000639659 KALRNO60229 2985 aa15.49■□□□□ 0.07
SYNE2-228ENST00000639659 ITIH6Q6UXX5 1313 aa15.49■□□□□ 0.07
SYNE2-228ENST00000639659 TRIM49BA6NDI0 452 aa15.49■□□□□ 0.07
SYNE2-228ENST00000639659 F5H5T6 163 aa15.49■□□□□ 0.07
SYNE2-228ENST00000639659 TK2O00142 265 aa15.49■□□□□ 0.07
SYNE2-228ENST00000639659 ZNF202O95125 648 aa15.49■□□□□ 0.07
SYNE2-228ENST00000639659 ZNF18P17022 549 aa15.49■□□□□ 0.07
SYNE2-228ENST00000639659 DRD3P35462 400 aa15.49■□□□□ 0.07
SYNE2-228ENST00000639659 PRCPP42785 496 aa15.49■□□□□ 0.07
SYNE2-228ENST00000639659 INSM1Q01101 510 aaPredicted RBP15.49■□□□□ 0.07
SYNE2-228ENST00000639659 TAF1BQ53T94 588 aaPredicted RBP15.49■□□□□ 0.07
SYNE2-228ENST00000639659 ZC3H12AQ5D1E8 599 aaKnown RBP15.49■□□□□ 0.07
SYNE2-228ENST00000639659 SFMBT2Q5VUG0 894 aa15.49■□□□□ 0.07
SYNE2-228ENST00000639659 MFSD2AQ8NA29 543 aa15.49■□□□□ 0.07
SYNE2-228ENST00000639659 KDM1BQ8NB78 822 aa15.49■□□□□ 0.07
SYNE2-228ENST00000639659 SNIP1Q8TAD8 396 aaKnown RBP15.49■□□□□ 0.07
SYNE2-228ENST00000639659 OR8D1Q8WZ84 308 aa15.49■□□□□ 0.07
SYNE2-228ENST00000639659 KLK6Q92876 244 aa15.49■□□□□ 0.07
SYNE2-228ENST00000639659 COL26A1Q96A83 441 aa15.49■□□□□ 0.07
SYNE2-228ENST00000639659 ZSWIM1Q9BR11 485 aa15.49■□□□□ 0.07
SYNE2-228ENST00000639659 CYTH4Q9UIA0 394 aa15.49■□□□□ 0.07
SYNE2-228ENST00000639659 PTPRQQ9UMZ3 2332 aa15.49■□□□□ 0.07
SYNE2-228ENST00000639659 RNF225M0QZC1 329 aaPredicted RBP15.48■□□□□ 0.07
SYNE2-228ENST00000639659 SIGLEC6O43699 453 aa15.48■□□□□ 0.07
SYNE2-228ENST00000639659 MAGEC1O60732 1142 aa15.48■□□□□ 0.07
SYNE2-228ENST00000639659 FYNP06241 537 aa15.48■□□□□ 0.07
SYNE2-228ENST00000639659 PLA2G2AP14555 144 aa15.48■□□□□ 0.07
SYNE2-228ENST00000639659 ILKQ13418 452 aa15.48■□□□□ 0.07
SYNE2-228ENST00000639659 ARID5BQ14865 1188 aa15.48■□□□□ 0.07
SYNE2-228ENST00000639659 CNGA2Q16280 664 aa15.48■□□□□ 0.07
SYNE2-228ENST00000639659 CCDC40Q4G0X9 1142 aa15.48■□□□□ 0.07
SYNE2-228ENST00000639659 SYPL2Q5VXT5 272 aa15.48■□□□□ 0.07
SYNE2-228ENST00000639659 ANKRD40Q6AI12 368 aa15.48■□□□□ 0.07
SYNE2-228ENST00000639659 RRAGAQ7L523 313 aa15.48■□□□□ 0.07
SYNE2-228ENST00000639659 TMC6Q7Z403 805 aa15.48■□□□□ 0.07
SYNE2-228ENST00000639659 DSG4Q86SJ6 1040 aa15.48■□□□□ 0.07
SYNE2-228ENST00000639659 SPACA3Q8IXA5 215 aa15.48■□□□□ 0.07
SYNE2-228ENST00000639659 ZNF843Q8N446 348 aa15.48■□□□□ 0.07
SYNE2-228ENST00000639659 CCDC34Q96HJ3 373 aa15.48■□□□□ 0.07
SYNE2-228ENST00000639659 HSFY1Q96LI6 401 aa15.48■□□□□ 0.07
SYNE2-228ENST00000639659 SPAG5Q96R06 1193 aa15.48■□□□□ 0.07
SYNE2-228ENST00000639659 ERVMER34-1Q9H9K5 563 aa15.48■□□□□ 0.07
SYNE2-228ENST00000639659 RMND1Q9NWS8 449 aa15.48■□□□□ 0.07
SYNE2-228ENST00000639659 SLC25A13Q9UJS0 675 aa15.48■□□□□ 0.07
SYNE2-228ENST00000639659 PCDHB1Q9Y5F3 818 aa15.48■□□□□ 0.07
SYNE2-228ENST00000639659 DOCK9Q9BZ29 2069 aa15.47■□□□□ 0.07
SYNE2-228ENST00000639659 TEX51A0A1B0GUA7 166 aa15.47■□□□□ 0.07
SYNE2-228ENST00000639659 TRIM38O00635 465 aa15.47■□□□□ 0.07
SYNE2-228ENST00000639659 LATO43561 262 aa15.47■□□□□ 0.07
SYNE2-228ENST00000639659 MT-CO3P00414 261 aa15.47■□□□□ 0.07
SYNE2-228ENST00000639659 KRT5P13647 590 aa15.47■□□□□ 0.07
SYNE2-228ENST00000639659 PRLRP16471 622 aa15.47■□□□□ 0.07
SYNE2-228ENST00000639659 RXRGP48443 463 aa15.47■□□□□ 0.07
SYNE2-228ENST00000639659 FMO5P49326 533 aa15.47■□□□□ 0.07
SYNE2-228ENST00000639659 PMS1P54277 932 aaKnown RBP15.47■□□□□ 0.07
SYNE2-228ENST00000639659 FKBP3Q00688 224 aaKnown RBP15.47■□□□□ 0.07
SYNE2-228ENST00000639659 TLE3Q04726 772 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms