RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 MMRN1Q13201 1228 aa16.44■□□□□ 0.22
CLN6-216ENST00000636876 GEN1Q17RS7 908 aa16.44■□□□□ 0.22
CLN6-216ENST00000636876 ODF2Q5BJF6 829 aa16.44■□□□□ 0.22
CLN6-216ENST00000636876 ANKS1BQ7Z6G8 1248 aa16.44■□□□□ 0.22
CLN6-216ENST00000636876 SETD3Q86TU7 594 aaPredicted RBP16.44■□□□□ 0.22
CLN6-216ENST00000636876 VSIG1Q86XK7 387 aa16.44■□□□□ 0.22
CLN6-216ENST00000636876 ZNF687Q8N1G0 1237 aa16.44■□□□□ 0.22
CLN6-216ENST00000636876 OR52K2Q8NGK3 314 aa16.44■□□□□ 0.22
CLN6-216ENST00000636876 WFIKKN2Q8TEU8 576 aa16.44■□□□□ 0.22
CLN6-216ENST00000636876 LTB4R2Q9NPC1 389 aa16.44■□□□□ 0.22
CLN6-216ENST00000636876 KCND1Q9NSA2 647 aa16.44■□□□□ 0.22
CLN6-216ENST00000636876 NDRG2Q9UN36 371 aaKnown RBP16.44■□□□□ 0.22
CLN6-216ENST00000636876 A0A0A0MRY4 1105 aa16.43■□□□□ 0.22
CLN6-216ENST00000636876 ILVBLA1L0T0 632 aa16.43■□□□□ 0.22
CLN6-216ENST00000636876 TBC1D3BA6NDS4 549 aa16.43■□□□□ 0.22
CLN6-216ENST00000636876 EGFP01133 1207 aa16.43■□□□□ 0.22
CLN6-216ENST00000636876 AMPD1P23109 780 aa16.43■□□□□ 0.22
CLN6-216ENST00000636876 TARSP26639 723 aaKnown RBP16.43■□□□□ 0.22
CLN6-216ENST00000636876 SLC12A1Q13621 1099 aa16.43■□□□□ 0.22
CLN6-216ENST00000636876 UBXN2BQ14CS0 331 aa16.43■□□□□ 0.22
CLN6-216ENST00000636876 C6orf118Q5T5N4 469 aa16.43■□□□□ 0.22
CLN6-216ENST00000636876 NUDT18Q6ZVK8 323 aa16.43■□□□□ 0.22
CLN6-216ENST00000636876 SFTPA1Q8IWL2 248 aa16.43■□□□□ 0.22
CLN6-216ENST00000636876 UBL4BQ8N7F7 174 aa16.43■□□□□ 0.22
CLN6-216ENST00000636876 EXD1Q8NHP7 514 aa16.43■□□□□ 0.22
CLN6-216ENST00000636876 ALG3Q92685 438 aa16.43■□□□□ 0.22
CLN6-216ENST00000636876 EZH1Q92800 747 aaPredicted RBP16.43■□□□□ 0.22
CLN6-216ENST00000636876 RNF25Q96BH1 459 aaPredicted RBP16.43■□□□□ 0.22
CLN6-216ENST00000636876 FAF2Q96CS3 445 aa16.43■□□□□ 0.22
CLN6-216ENST00000636876 HES6Q96HZ4 224 aa16.43■□□□□ 0.22
CLN6-216ENST00000636876 NELL2Q99435 816 aa16.43■□□□□ 0.22
CLN6-216ENST00000636876 FOXQ1Q9C009 403 aa16.43■□□□□ 0.22
CLN6-216ENST00000636876 MFSD1Q9H3U5 465 aa16.43■□□□□ 0.22
CLN6-216ENST00000636876 NDFIP2Q9NV92 336 aa16.43■□□□□ 0.22
CLN6-216ENST00000636876 DONSONQ9NYP3 566 aa16.43■□□□□ 0.22
CLN6-216ENST00000636876 DNAI1Q9UI46 699 aa16.43■□□□□ 0.22
CLN6-216ENST00000636876 PACSIN2Q9UNF0 486 aaPredicted RBP16.43■□□□□ 0.22
CLN6-216ENST00000636876 FAM170BA6NMN3 283 aa16.42■□□□□ 0.22
CLN6-216ENST00000636876 PRRT4C9JH25 899 aa16.42■□□□□ 0.22
CLN6-216ENST00000636876 STK25O00506 426 aa16.42■□□□□ 0.22
CLN6-216ENST00000636876 DCLK1O15075 740 aa16.42■□□□□ 0.22
CLN6-216ENST00000636876 DDX3YO15523 660 aaKnown RBP16.42■□□□□ 0.22
CLN6-216ENST00000636876 ZRANB2O95218 330 aaKnown RBP eCLIP16.42■□□□□ 0.22
CLN6-216ENST00000636876 MZF1P28698 734 aaPredicted RBP16.42■□□□□ 0.22
CLN6-216ENST00000636876 CSKP41240 450 aa16.42■□□□□ 0.22
CLN6-216ENST00000636876 TNFRSF4P43489 277 aa16.42■□□□□ 0.22
CLN6-216ENST00000636876 PLK1P53350 603 aa16.42■□□□□ 0.22
CLN6-216ENST00000636876 RWDD2BP57060 319 aa16.42■□□□□ 0.22
CLN6-216ENST00000636876 CCINQ13939 588 aa16.42■□□□□ 0.22
CLN6-216ENST00000636876 DMC1Q14565 340 aa16.42■□□□□ 0.22
CLN6-216ENST00000636876 TAZQ16635 292 aa16.42■□□□□ 0.22
CLN6-216ENST00000636876 FUT11Q495W5 492 aa16.42■□□□□ 0.22
CLN6-216ENST00000636876 ANKRD20A8PQ5CZ79 823 aa16.42■□□□□ 0.22
CLN6-216ENST00000636876 MEI1Q5TIA1 1274 aa16.42■□□□□ 0.22
CLN6-216ENST00000636876 RNF219Q5W0B1 726 aaPredicted RBP16.42■□□□□ 0.22
CLN6-216ENST00000636876 MFSD7Q6UXD7 560 aa16.42■□□□□ 0.22
CLN6-216ENST00000636876 ZNF783Q6ZMS7 281 aa16.42■□□□□ 0.22
CLN6-216ENST00000636876 SPOCD1Q6ZMY3 1216 aa16.42■□□□□ 0.22
CLN6-216ENST00000636876 RCOR2Q8IZ40 523 aa16.42■□□□□ 0.22
CLN6-216ENST00000636876 AHI1Q8N157 1196 aa16.42■□□□□ 0.22
CLN6-216ENST00000636876 UMODL1-AS1Q8N2C9 162 aa16.42■□□□□ 0.22
CLN6-216ENST00000636876 PCDH19Q8TAB3 1148 aa16.42■□□□□ 0.22
CLN6-216ENST00000636876 TRIM44Q96DX7 344 aaPredicted RBP16.42■□□□□ 0.22
CLN6-216ENST00000636876 ALG14Q96F25 216 aa16.42■□□□□ 0.22
CLN6-216ENST00000636876 RBM41Q96IZ5 413 aaKnown RBP16.42■□□□□ 0.22
CLN6-216ENST00000636876 OSBPL6Q9BZF3 934 aa16.42■□□□□ 0.22
CLN6-216ENST00000636876 ETNK2Q9NVF9 386 aa16.42■□□□□ 0.22
CLN6-216ENST00000636876 INTS6Q9UL03 887 aaKnown RBP16.42■□□□□ 0.22
CLN6-216ENST00000636876 MTF2Q9Y483 593 aaPredicted RBP16.42■□□□□ 0.22
CLN6-216ENST00000636876 ARIH1Q9Y4X5 557 aaPredicted RBP16.42■□□□□ 0.22
CLN6-216ENST00000636876 OR51B4Q9Y5P0 310 aa16.42■□□□□ 0.22
CLN6-216ENST00000636876 ZDBF2Q9HCK1 2354 aa16.41■□□□□ 0.22
CLN6-216ENST00000636876 K7EQS6 105 aa16.41■□□□□ 0.22
CLN6-216ENST00000636876 KIF5CO60282 957 aa16.41■□□□□ 0.22
CLN6-216ENST00000636876 RAMP2O60895 175 aa16.41■□□□□ 0.22
CLN6-216ENST00000636876 PDGFBP01127 241 aaPredicted RBP16.41■□□□□ 0.22
CLN6-216ENST00000636876 CHRNB1P11230 501 aa16.41■□□□□ 0.22
CLN6-216ENST00000636876 CDKN2BP42772 138 aa16.41■□□□□ 0.22
CLN6-216ENST00000636876 GNA12Q03113 381 aa16.41■□□□□ 0.22
CLN6-216ENST00000636876 EIF4HQ15056 248 aaKnown RBP16.41■□□□□ 0.22
CLN6-216ENST00000636876 PLEKHG6Q3KR16 790 aa16.41■□□□□ 0.22
CLN6-216ENST00000636876 FBXO43Q4G163 708 aa16.41■□□□□ 0.22
CLN6-216ENST00000636876 PITRM1Q5JRX3 1037 aa16.41■□□□□ 0.22
CLN6-216ENST00000636876 DGKKQ5KSL6 1271 aa16.41■□□□□ 0.22
CLN6-216ENST00000636876 ZNF569Q5MCW4 686 aa16.41■□□□□ 0.22
CLN6-216ENST00000636876 TMEM215Q68D42 235 aa16.41■□□□□ 0.22
CLN6-216ENST00000636876 TMCO3Q6UWJ1 677 aa16.41■□□□□ 0.22
CLN6-216ENST00000636876 ADIPOR2Q86V24 386 aa16.41■□□□□ 0.22
CLN6-216ENST00000636876 APCDD1Q8J025 514 aa16.41■□□□□ 0.22
CLN6-216ENST00000636876 FLCNQ8NFG4 579 aa16.41■□□□□ 0.22
CLN6-216ENST00000636876 PJA1Q8NG27 643 aa16.41■□□□□ 0.22
CLN6-216ENST00000636876 RNF157Q96PX1 679 aa16.41■□□□□ 0.22
CLN6-216ENST00000636876 FEM1AQ9BSK4 669 aa16.41■□□□□ 0.22
CLN6-216ENST00000636876 KLC2Q9H0B6 622 aa16.41■□□□□ 0.22
CLN6-216ENST00000636876 MUC3BQ9H195 1237 aa16.41■□□□□ 0.22
CLN6-216ENST00000636876 MAGEH1Q9H213 219 aa16.41■□□□□ 0.22
CLN6-216ENST00000636876 NOL6Q9H6R4 1146 aaKnown RBP16.41■□□□□ 0.22
CLN6-216ENST00000636876 ELOVL2Q9NXB9 296 aa16.41■□□□□ 0.22
CLN6-216ENST00000636876 MFHAS1Q9Y4C4 1052 aa16.41■□□□□ 0.22
CLN6-216ENST00000636876 CHD5Q8TDI0 1954 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms