RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 GALNT2Q10471 571 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 GEN1Q17RS7 908 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 ANKRD20A4Q4UJ75 823 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 UPF3AQ9H1J1 476 aaKnown RBP4.65□□□□□ -1.66
SCN1A-210ENST00000635776 RHOJQ9H4E5 214 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 USP29Q9HBJ7 922 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 ARHGEF3Q9NR81 526 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 DNAJB4Q9UDY4 337 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 PCDHB7Q9Y5E2 793 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 COL4A5P29400 1685 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 MATN3O15232 486 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 EFCAB14O75071 495 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 CCNB1P14635 433 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 ETS1P14921 441 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 ACAT1P24752 427 aaKnown RBP4.65□□□□□ -1.66
SCN1A-210ENST00000635776 WNT7BP56706 349 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 NCALDP61601 193 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 MRPS35P82673 323 aaKnown RBP4.65□□□□□ -1.66
SCN1A-210ENST00000635776 POU4F1Q01851 419 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 MOGSQ13724 837 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 TAF11Q15544 211 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 HP1BP3Q5SSJ5 553 aaPredicted RBP4.65□□□□□ -1.66
SCN1A-210ENST00000635776 STEAP4Q687X5 459 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 STRA8Q7Z7C7 330 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 PACS2Q86VP3 889 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 TASP1Q9H6P5 420 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 TMEM161AQ9NX61 479 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 MYH7BA7E2Y1 1941 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 VPS4BO75351 444 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 HOXB6P17509 224 aaKnown RBP4.65□□□□□ -1.66
SCN1A-210ENST00000635776 OR1G1P47890 313 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 HSPA13P48723 471 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 GPX6P59796 221 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 PRKD1Q15139 912 aaPredicted RBP4.65□□□□□ -1.66
SCN1A-210ENST00000635776 MARCH8Q5T0T0 291 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 FAM228AQ86W67 206 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 BTN2A3PQ96KV6 586 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 TRIM56Q9BRZ2 755 aaKnown RBP4.65□□□□□ -1.66
SCN1A-210ENST00000635776 TMEM175Q9BSA9 504 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 TRPM5Q9NZQ8 1165 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 SLC8A2Q9UPR5 921 aa4.65□□□□□ -1.66
SCN1A-210ENST00000635776 ARIH1Q9Y4X5 557 aaPredicted RBP4.65□□□□□ -1.66
SCN1A-210ENST00000635776 ARFGEF1Q9Y6D6 1849 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 TTLL13PA6NNM8 815 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 IRAK2O43187 625 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 DGKIO75912 1065 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 SERPINF2P08697 491 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 MGAT1P26572 445 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 PMLP29590 882 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 BTG3Q14201 252 aaPredicted RBP4.65□□□□□ -1.67
SCN1A-210ENST00000635776 CRYMQ14894 314 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 FASTKD1Q53R41 847 aaKnown RBP4.65□□□□□ -1.67
SCN1A-210ENST00000635776 GJC2Q5T442 439 aaPredicted RBP4.65□□□□□ -1.67
SCN1A-210ENST00000635776 FBXO32Q969P5 355 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 SIGLEC10Q96LC7 697 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 MRPL46Q9H2W6 279 aaKnown RBP4.65□□□□□ -1.67
SCN1A-210ENST00000635776 THEGQ9P2T0 379 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 SAE1Q9UBE0 346 aaPredicted RBP4.65□□□□□ -1.67
SCN1A-210ENST00000635776 SIPA1L1O43166 1804 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 A0A096LPK6 155 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.65□□□□□ -1.67
SCN1A-210ENST00000635776 RAMP2O60895 175 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 SP3Q02447 781 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 PABPC1LQ4VXU2 614 aaKnown RBP4.65□□□□□ -1.67
SCN1A-210ENST00000635776 FBXW10Q5XX13 1052 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 OTOAQ7RTW8 1153 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 OVCA2Q8WZ82 227 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 FATE1Q969F0 183 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 POLR1EQ9GZS1 481 aaKnown RBP4.65□□□□□ -1.67
SCN1A-210ENST00000635776 RRAGCQ9HB90 399 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 HMX1Q9NP08 348 aaPredicted RBP4.65□□□□□ -1.67
SCN1A-210ENST00000635776 RBM22Q9NW64 420 aaKnown RBP eCLIP4.65□□□□□ -1.671e-6■■■■■ 27.8
SCN1A-210ENST00000635776 PADI3Q9ULW8 664 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 MAFFQ9ULX9 164 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 SCN9AQ15858 1988 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 WDR27A2RRH5 827 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 SLC10A3P09131 477 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 GDF10P55107 478 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 WDR4P57081 412 aaKnown RBP4.65□□□□□ -1.67
SCN1A-210ENST00000635776 ABCE1P61221 599 aaKnown RBP4.65□□□□□ -1.67
SCN1A-210ENST00000635776 GBE1Q04446 702 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 RPS6KA2Q15349 733 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 ANKRD22Q5VYY1 191 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 KIAA0930Q6ICG6 404 aaPredicted RBP4.65□□□□□ -1.67
SCN1A-210ENST00000635776 LONP2Q86WA8 852 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 CHCHD4Q8N4Q1 142 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 CCDC33Q8N5R6 958 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 CCDC28BQ9BUN5 200 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 KATNBL1Q9H079 304 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 NMRAL1Q9HBL8 299 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 DNAJC28Q9NX36 388 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 SCOCQ9UIL1 159 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 CDYLQ9Y232 598 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 HBS1LQ9Y450 684 aaKnown RBP4.65□□□□□ -1.67
SCN1A-210ENST00000635776 B2RBV5 119 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 GOLGA8RI6L899 631 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 ALDH1A2O94788 518 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 RCN2Q14257 317 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 RALGPS1Q5JS13 557 aa4.65□□□□□ -1.67
SCN1A-210ENST00000635776 FNBP1LQ5T0N5 605 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms