RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 ELF2Q15723 593 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 ST3GAL2Q16842 350 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 PFKFB3Q16875 520 aaPredicted RBP1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 KRTAP24-1Q3LI83 254 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 ARHGAP15Q53QZ3 475 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 INO80DQ53TQ3 878 aaPredicted RBP1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 ZNF569Q5MCW4 686 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 LCE3CQ5T5A8 94 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 RAP1GAP2Q684P5 730 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 ANKRD40Q6AI12 368 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 C1orf228Q6PIY5 440 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 KRTAP5-2Q701N4 177 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 USP49Q70CQ1 688 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 FAM57BQ71RH2 274 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 TRILQ7L0X0 811 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 RBM23Q86U06 439 aaKnown RBP1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 MORC1Q86VD1 984 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 MYLK4Q86YV6 388 aaPredicted RBP1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 RASGRP3Q8IV61 690 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 SYTL1Q8IYJ3 562 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 FAM186BQ8IYM0 893 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 ADGRF4Q8IZF3 695 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 SPEM1Q8N4L4 309 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 LINC01465Q8N7H1 131 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 DBF4BQ8NFT6 615 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 ELP5Q8TE02 316 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 PMM1Q92871 262 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 WBP2Q969T9 261 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 MUL1Q969V5 352 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 SNX27Q96L92 541 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 CINPQ9BW66 212 aaPredicted RBP1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 GATA5Q9BWX5 397 aaPredicted RBP1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 TM2D2Q9BX73 214 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 DPH1Q9BZG8 443 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 TRIM5Q9C035 493 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 BRD8Q9H0E9 1235 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 PCDHAC1Q9H158 963 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 FAM83DQ9H4H8 585 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 C6orf106Q9H6K1 298 aaPredicted RBP1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 AS3MTQ9HBK9 375 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 ARFGAP3Q9NP61 516 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 NLRC4Q9NPP4 1024 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 CD93Q9NPY3 652 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 STARD7Q9NQZ5 370 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 CDC23Q9UJX2 597 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 ASAP1Q9ULH1 1129 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 MYO6Q9UM54 1294 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 PHTF1Q9UMS5 762 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 PCDHA12Q9UN75 941 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 LRCH1Q9Y2L9 728 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 SLC27A6Q9Y2P4 619 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 KIF26BQ2KJY2 2108 aa1.27□□□□□ -2.21
SMARCB1-209ENST00000635578 N4BP2Q86UW6 1770 aaPredicted RBP1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 KIAA1551Q9HCM1 1747 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 C5P01031 1676 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 KIF1AQ12756 1690 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 ADGRB2O60241 1585 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 AGLP35573 1532 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 FAM135AQ9P2D6 1515 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 ZNF518AQ6AHZ1 1483 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 UHRF1BP1Q6BDS2 1440 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 AKNAQ7Z591 1439 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 CARMIL1Q5VZK9 1371 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 SLC22A23A1A5C7 686 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 FAM234BA2RU67 622 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 TTC34A8MYJ7 566 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 F5H423 210 aaPredicted RBP1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 F8W810 466 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 J3KTA2 159 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 AGPSO00116 658 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 RRHO14718 337 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 PIP5K1BO14986 540 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 AREL1O15033 823 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 SPTLC2O15270 562 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 SPRY2O43597 315 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 VIPP01282 170 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 TMIGD3P0DMS9 266 aaPredicted RBP1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 PEPDP12955 493 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 ALADP13716 330 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 PECAM1P16284 738 aaPredicted RBP1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 TSHRP16473 764 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 ATF7P17544 494 aaPredicted RBP1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 TBXAS1P24557 533 aaPredicted RBP1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 ADRA1DP25100 572 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 EEF1GP26641 437 aaKnown RBP1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 GALNSP34059 522 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 IGHMBP2P38935 993 aaKnown RBP1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 PBX1P40424 430 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 KCNJ4P48050 445 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 CLCN5P51795 746 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 CASP5P51878 434 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 JAK3P52333 1124 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 COPAP53621 1224 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 ALDH18A1P54886 795 aaKnown RBP1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 MTA1Q13330 715 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 CBFBQ13951 182 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 CSHL1Q14406 222 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 RPS6KA2Q15349 733 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 CNGA3Q16281 694 aa1.26□□□□□ -2.21
SMARCB1-209ENST00000635578 FAM110CQ1W6H9 321 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms