RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 CNTNAP3Q9BZ76 1288 aa20.62■□□□□ 0.89
R3HCC1-210ENST00000625275 OSGEPQ9NPF4 335 aa20.62■□□□□ 0.89
R3HCC1-210ENST00000625275 TMEM74BQ9NUR3 256 aa20.62■□□□□ 0.89
R3HCC1-210ENST00000625275 CTTNBP2NLQ9P2B4 639 aa20.62■□□□□ 0.89
R3HCC1-210ENST00000625275 UVRAGQ9P2Y5 699 aa20.62■□□□□ 0.89
R3HCC1-210ENST00000625275 THAP10Q9P2Z0 257 aaPredicted RBP20.62■□□□□ 0.89
R3HCC1-210ENST00000625275 CLEC4EQ9ULY5 219 aa20.62■□□□□ 0.89
R3HCC1-210ENST00000625275 CYP8B1Q9UNU6 501 aa20.62■□□□□ 0.89
R3HCC1-210ENST00000625275 MSI1O43347 362 aaKnown RBP20.61■□□□□ 0.89
R3HCC1-210ENST00000625275 KCNK5O95279 499 aa20.61■□□□□ 0.89
R3HCC1-210ENST00000625275 LATS1O95835 1130 aa20.61■□□□□ 0.89
R3HCC1-210ENST00000625275 IGLV3-25P01717 112 aa20.61■□□□□ 0.89
R3HCC1-210ENST00000625275 ITPKAP23677 461 aa20.61■□□□□ 0.89
R3HCC1-210ENST00000625275 LMAN2Q12907 356 aa20.61■□□□□ 0.89
R3HCC1-210ENST00000625275 ENPP2Q13822 863 aa20.61■□□□□ 0.89
R3HCC1-210ENST00000625275 E2F5Q15329 346 aa20.61■□□□□ 0.89
R3HCC1-210ENST00000625275 SLC25A52Q3SY17 297 aa20.61■□□□□ 0.89
R3HCC1-210ENST00000625275 CCDC14Q49A88 953 aa20.61■□□□□ 0.89
R3HCC1-210ENST00000625275 MPPE1Q53F39 396 aa20.61■□□□□ 0.89
R3HCC1-210ENST00000625275 SLC35G2Q8TBE7 412 aa20.61■□□□□ 0.89
R3HCC1-210ENST00000625275 ZNF564Q8TBZ8 553 aaPredicted RBP20.61■□□□□ 0.89
R3HCC1-210ENST00000625275 NUSAP1Q9BXS6 441 aaKnown RBP20.61■□□□□ 0.89
R3HCC1-210ENST00000625275 SLC6A17Q9H1V8 727 aa20.61■□□□□ 0.89
R3HCC1-210ENST00000625275 STOML2Q9UJZ1 356 aa20.61■□□□□ 0.89
R3HCC1-210ENST00000625275 PILRBQ9UKJ0 227 aa20.61■□□□□ 0.89
R3HCC1-210ENST00000625275 STAP1Q9ULZ2 295 aa20.61■□□□□ 0.89
R3HCC1-210ENST00000625275 TP53BP1Q12888 1972 aaPredicted RBP20.6■□□□□ 0.89
R3HCC1-210ENST00000625275 PJA2O43164 708 aa20.6■□□□□ 0.89
R3HCC1-210ENST00000625275 TRUB2O95900 331 aaKnown RBP20.6■□□□□ 0.89
R3HCC1-210ENST00000625275 CCDC175P0C221 793 aa20.6■□□□□ 0.89
R3HCC1-210ENST00000625275 HOXD9P28356 352 aaPredicted RBP20.6■□□□□ 0.89
R3HCC1-210ENST00000625275 SDC4P31431 198 aa20.6■□□□□ 0.89
R3HCC1-210ENST00000625275 IL12RB1P42701 662 aa20.6■□□□□ 0.89
R3HCC1-210ENST00000625275 PTPN9P43378 593 aa20.6■□□□□ 0.89
R3HCC1-210ENST00000625275 SULT1E1P49888 294 aa20.6■□□□□ 0.89
R3HCC1-210ENST00000625275 ZNF143P52747 638 aaPredicted RBP20.6■□□□□ 0.89
R3HCC1-210ENST00000625275 ZNF252P-AS1Q0IIN9 211 aa20.6■□□□□ 0.89
R3HCC1-210ENST00000625275 TCEAL1Q15170 157 aa20.6■□□□□ 0.89
R3HCC1-210ENST00000625275 C15orf59Q2T9L4 293 aaPredicted RBP20.6■□□□□ 0.89
R3HCC1-210ENST00000625275 N4BP2L1Q5TBK1 243 aaPredicted RBP20.6■□□□□ 0.89
R3HCC1-210ENST00000625275 KIAA1324Q6UXG2 1013 aaKnown RBP20.6■□□□□ 0.89
R3HCC1-210ENST00000625275 RHOT2Q8IXI1 618 aa20.6■□□□□ 0.89
R3HCC1-210ENST00000625275 TBCBQ99426 244 aa20.6■□□□□ 0.89
R3HCC1-210ENST00000625275 FAM204AQ9H8W3 233 aa20.6■□□□□ 0.89
R3HCC1-210ENST00000625275 RRN3Q9NYV6 651 aa20.6■□□□□ 0.89
R3HCC1-210ENST00000625275 ANAPC7Q9UJX3 599 aa20.6■□□□□ 0.89
R3HCC1-210ENST00000625275 DUSP10Q9Y6W6 482 aa20.6■□□□□ 0.89
R3HCC1-210ENST00000625275 M0QYT0 321 aa20.59■□□□□ 0.89
R3HCC1-210ENST00000625275 CDX4O14627 284 aaPredicted RBP20.59■□□□□ 0.89
R3HCC1-210ENST00000625275 ATP11AP98196 1134 aa20.59■□□□□ 0.89
R3HCC1-210ENST00000625275 ZNF33AQ06730 810 aa20.59■□□□□ 0.89
R3HCC1-210ENST00000625275 FUT11Q495W5 492 aa20.59■□□□□ 0.89
R3HCC1-210ENST00000625275 ADGRF1Q5T601 910 aa20.59■□□□□ 0.89
R3HCC1-210ENST00000625275 SLC23A3Q6PIS1 610 aa20.59■□□□□ 0.89
R3HCC1-210ENST00000625275 BNIPLQ7Z465 357 aa20.59■□□□□ 0.89
R3HCC1-210ENST00000625275 DEFB119Q8N690 84 aa20.59■□□□□ 0.89
R3HCC1-210ENST00000625275 FNIP1Q8TF40 1166 aa20.59■□□□□ 0.89
R3HCC1-210ENST00000625275 BTBD6Q96KE9 485 aa20.59■□□□□ 0.89
R3HCC1-210ENST00000625275 SERPINB11Q96P15 392 aa20.59■□□□□ 0.89
R3HCC1-210ENST00000625275 CIPCQ9C0C6 399 aa20.59■□□□□ 0.89
R3HCC1-210ENST00000625275 CD93Q9NPY3 652 aa20.59■□□□□ 0.89
R3HCC1-210ENST00000625275 DDIT4Q9NX09 232 aa20.59■□□□□ 0.89
R3HCC1-210ENST00000625275 ELOVL2Q9NXB9 296 aa20.59■□□□□ 0.89
R3HCC1-210ENST00000625275 TRIM10Q9UDY6 481 aa20.59■□□□□ 0.89
R3HCC1-210ENST00000625275 SALL4Q9UJQ4 1053 aa20.59■□□□□ 0.89
R3HCC1-210ENST00000625275 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.59■□□□□ 0.89
R3HCC1-210ENST00000625275 KNL1Q8NG31 2342 aa20.58■□□□□ 0.89
R3HCC1-210ENST00000625275 KMT2BQ9UMN6 2715 aaPredicted RBP20.58■□□□□ 0.89
R3HCC1-210ENST00000625275 A0A0A6YYK5 440 aaPredicted RBP20.58■□□□□ 0.89
R3HCC1-210ENST00000625275 IRAK2O43187 625 aa20.58■□□□□ 0.89
R3HCC1-210ENST00000625275 CCP110O43303 1012 aa20.58■□□□□ 0.89
R3HCC1-210ENST00000625275 TSPAN3O60637 253 aa20.58■□□□□ 0.89
R3HCC1-210ENST00000625275 MTA2O94776 668 aa20.58■□□□□ 0.89
R3HCC1-210ENST00000625275 IGLV3-27P01718 113 aa20.58■□□□□ 0.89
R3HCC1-210ENST00000625275 EIF4EBP2Q13542 120 aaPredicted RBP20.58■□□□□ 0.89
R3HCC1-210ENST00000625275 ZNF234Q14588 700 aa20.58■□□□□ 0.89
R3HCC1-210ENST00000625275 CDO1Q16878 200 aa20.58■□□□□ 0.89
R3HCC1-210ENST00000625275 SH3PXD2AQ5TCZ1 1133 aa20.58■□□□□ 0.89
R3HCC1-210ENST00000625275 PSAPL1Q6NUJ1 521 aa20.58■□□□□ 0.89
R3HCC1-210ENST00000625275 TXLNBQ8N3L3 684 aa20.58■□□□□ 0.89
R3HCC1-210ENST00000625275 PGAP3Q96FM1 320 aaPredicted RBP20.58■□□□□ 0.89
R3HCC1-210ENST00000625275 CNPY3Q9BT09 278 aa20.58■□□□□ 0.89
R3HCC1-210ENST00000625275 PPP2R2CQ9Y2T4 447 aa20.58■□□□□ 0.89
R3HCC1-210ENST00000625275 SYNJ2BP-COX16A0A087WUM0 186 aa20.57■□□□□ 0.88
R3HCC1-210ENST00000625275 BTNL10A8MVZ5 291 aa20.57■□□□□ 0.88
R3HCC1-210ENST00000625275 CFIP05156 583 aa20.57■□□□□ 0.88
R3HCC1-210ENST00000625275 PSMA2P25787 234 aa20.57■□□□□ 0.88
R3HCC1-210ENST00000625275 PMLP29590 882 aa20.57■□□□□ 0.88
R3HCC1-210ENST00000625275 NOVA1P51513 510 aaKnown RBP20.57■□□□□ 0.88
R3HCC1-210ENST00000625275 KIF5AQ12840 1032 aa20.57■□□□□ 0.88
R3HCC1-210ENST00000625275 NME3Q13232 169 aa20.57■□□□□ 0.88
R3HCC1-210ENST00000625275 NNTQ13423 1086 aa20.57■□□□□ 0.88
R3HCC1-210ENST00000625275 DUOXA1Q1HG43 343 aa20.57■□□□□ 0.88
R3HCC1-210ENST00000625275 RAB6CQ53S08 254 aa20.57■□□□□ 0.88
R3HCC1-210ENST00000625275 TMEM215Q68D42 235 aa20.57■□□□□ 0.88
R3HCC1-210ENST00000625275 RABEPKQ7Z6M1 372 aa20.57■□□□□ 0.88
R3HCC1-210ENST00000625275 SLC41A1Q8IVJ1 513 aa20.57■□□□□ 0.88
R3HCC1-210ENST00000625275 CEP76Q8TAP6 659 aa20.57■□□□□ 0.88
R3HCC1-210ENST00000625275 CENPIQ92674 756 aaPredicted RBP20.57■□□□□ 0.88
R3HCC1-210ENST00000625275 HSPA12BQ96MM6 686 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 424.5 ms