RNA–Protein interactions for RNA: ENST00000622978.1

PCDHB12-202, Transcript of protocadherin beta 12, humanhuman

TSL 2 BASIC

Gene PCDHB12, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-202ENST00000622978 ARTNQ5T4W7 220 aa20.61■□□□□ 0.89
PCDHB12-202ENST00000622978 CASC4Q6P4E1 433 aa20.61■□□□□ 0.89
PCDHB12-202ENST00000622978 CCNJLQ8IV13 435 aa20.61■□□□□ 0.89
PCDHB12-202ENST00000622978 ARHGAP12Q8IWW6 846 aa20.61■□□□□ 0.89
PCDHB12-202ENST00000622978 FBXO22Q8NEZ5 403 aa20.61■□□□□ 0.89
PCDHB12-202ENST00000622978 TSGA13Q96PP4 275 aa20.61■□□□□ 0.89
PCDHB12-202ENST00000622978 GORASP1Q9BQQ3 440 aa20.61■□□□□ 0.89
PCDHB12-202ENST00000622978 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.61■□□□□ 0.89
PCDHB12-202ENST00000622978 ATP11BQ9Y2G3 1177 aa20.61■□□□□ 0.89
PCDHB12-202ENST00000622978 WDR27A2RRH5 827 aa20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 ERI2A8K979 691 aaKnown RBP20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 TYROBPO43914 113 aa20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 AP2A1O95782 977 aa20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 CD68P34810 354 aaPredicted RBP20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 MLLT6P55198 1093 aaPredicted RBP20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 IL9RQ01113 521 aa20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 ZKSCAN8Q15776 578 aaPredicted RBP20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 PIK3R6Q5UE93 754 aa20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 STEAP4Q687X5 459 aa20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 TRPM8Q7Z2W7 1104 aa20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 RTL3Q8N8U3 475 aaKnown RBP20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 DPF3Q92784 378 aa20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 ALKBH8Q96BT7 664 aaKnown RBP20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 TRIM56Q9BRZ2 755 aaKnown RBP20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 MTRRQ9UBK8 725 aa20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 ZNF180Q9UJW8 692 aa20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 EFEMP2O95967 443 aa20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 CCNCP24863 283 aa20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 MGAT1P26572 445 aa20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 TRIP4Q15650 581 aaPredicted RBP20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 C10orf120Q5SQS8 335 aa20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 DENND1AQ8TEH3 1009 aa20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 DIS3LQ8TF46 1054 aaKnown RBP20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 TEKT5Q96M29 485 aa20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 PAIP2Q9BPZ3 127 aaKnown RBP20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 NAT9Q9BTE0 207 aa20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 CWH43Q9H720 699 aa20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 SLC40A1Q9NP59 571 aa20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 TMEM39AQ9NV64 488 aa20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 PIH1D1Q9NWS0 290 aaKnown RBP20.6■□□□□ 0.89
PCDHB12-202ENST00000622978 ARHGAP42A6NI28 874 aa20.59■□□□□ 0.89
PCDHB12-202ENST00000622978 FAM159BA6NKW6 160 aa20.59■□□□□ 0.89
PCDHB12-202ENST00000622978 CXorf49A8MYA2 514 aaPredicted RBP20.59■□□□□ 0.89
PCDHB12-202ENST00000622978 SUN1O94901 812 aa20.59■□□□□ 0.89
PCDHB12-202ENST00000622978 MT-ND3P03897 115 aa20.59■□□□□ 0.89
PCDHB12-202ENST00000622978 PGAM1P18669 254 aa20.59■□□□□ 0.89
PCDHB12-202ENST00000622978 NFKB1P19838 968 aa20.59■□□□□ 0.89
PCDHB12-202ENST00000622978 RPA3P35244 121 aaPredicted RBP20.59■□□□□ 0.89
PCDHB12-202ENST00000622978 WDR4P57081 412 aaKnown RBP20.59■□□□□ 0.89
PCDHB12-202ENST00000622978 SPARCL1Q14515 664 aa20.59■□□□□ 0.89
PCDHB12-202ENST00000622978 PSMD5Q16401 504 aa20.59■□□□□ 0.89
PCDHB12-202ENST00000622978 SLC8B1Q6J4K2 584 aa20.59■□□□□ 0.89
PCDHB12-202ENST00000622978 C14orf80Q86SX3 495 aa20.59■□□□□ 0.89
PCDHB12-202ENST00000622978 ATP6V0D2Q8N8Y2 350 aa20.59■□□□□ 0.89
PCDHB12-202ENST00000622978 IGSF21Q96ID5 467 aa20.59■□□□□ 0.89
PCDHB12-202ENST00000622978 MARCH2Q9P0N8 246 aa20.59■□□□□ 0.89
PCDHB12-202ENST00000622978 ZWINTO95229 277 aa20.58■□□□□ 0.89
PCDHB12-202ENST00000622978 ASMTLO95671 621 aa20.58■□□□□ 0.89
PCDHB12-202ENST00000622978 JCHAINP01591 159 aa20.58■□□□□ 0.89
PCDHB12-202ENST00000622978 CRADDP78560 199 aa20.58■□□□□ 0.89
PCDHB12-202ENST00000622978 RASIP1Q5U651 963 aa20.58■□□□□ 0.89
PCDHB12-202ENST00000622978 TTC39BQ5VTQ0 682 aaPredicted RBP20.58■□□□□ 0.89
PCDHB12-202ENST00000622978 TRMT10BQ6PF06 316 aaKnown RBP20.58■□□□□ 0.89
PCDHB12-202ENST00000622978 CYS1Q717R9 158 aa20.58■□□□□ 0.89
PCDHB12-202ENST00000622978 SPATA21Q7Z572 469 aa20.58■□□□□ 0.89
PCDHB12-202ENST00000622978 MIB1Q86YT6 1006 aa20.58■□□□□ 0.89
PCDHB12-202ENST00000622978 ZSCAN18Q8TBC5 510 aaPredicted RBP20.58■□□□□ 0.89
PCDHB12-202ENST00000622978 SMYD2Q9NRG4 433 aa20.58■□□□□ 0.89
PCDHB12-202ENST00000622978 ABCF3Q9NUQ8 709 aa20.58■□□□□ 0.89
PCDHB12-202ENST00000622978 SYBUQ9NX95 663 aa20.58■□□□□ 0.89
PCDHB12-202ENST00000622978 FNIP2Q9P278 1114 aa20.58■□□□□ 0.89
PCDHB12-202ENST00000622978 BACE2Q9Y5Z0 518 aa20.58■□□□□ 0.89
PCDHB12-202ENST00000622978 SLC38A8A6NNN8 435 aa20.58■□□□□ 0.88
PCDHB12-202ENST00000622978 WASH4PA8MWX3 477 aa20.58■□□□□ 0.88
PCDHB12-202ENST00000622978 ADAM12O43184 909 aa20.58■□□□□ 0.88
PCDHB12-202ENST00000622978 RASSF9O75901 435 aa20.58■□□□□ 0.88
PCDHB12-202ENST00000622978 TBX18O95935 607 aa20.58■□□□□ 0.88
PCDHB12-202ENST00000622978 ATF6P18850 670 aa20.58■□□□□ 0.88
PCDHB12-202ENST00000622978 FOXN2P32314 431 aa20.58■□□□□ 0.88
PCDHB12-202ENST00000622978 RFC2P35250 354 aa20.58■□□□□ 0.88
PCDHB12-202ENST00000622978 MS4A13Q5J8X5 152 aa20.58■□□□□ 0.88
PCDHB12-202ENST00000622978 KCTD11Q693B1 232 aa20.58■□□□□ 0.88
PCDHB12-202ENST00000622978 ARHGAP36Q6ZRI8 547 aa20.58■□□□□ 0.88
PCDHB12-202ENST00000622978 RNF168Q8IYW5 571 aaPredicted RBP20.58■□□□□ 0.88
PCDHB12-202ENST00000622978 GIPC2Q8TF65 315 aa20.58■□□□□ 0.88
PCDHB12-202ENST00000622978 ARNTL2Q8WYA1 636 aa20.58■□□□□ 0.88
PCDHB12-202ENST00000622978 BTN2A3PQ96KV6 586 aa20.58■□□□□ 0.88
PCDHB12-202ENST00000622978 VN1R3Q9BXE9 311 aa20.58■□□□□ 0.88
PCDHB12-202ENST00000622978 SLC39A8Q9C0K1 460 aa20.58■□□□□ 0.88
PCDHB12-202ENST00000622978 HAUS2Q9NVX0 235 aa20.58■□□□□ 0.88
PCDHB12-202ENST00000622978 MOCS1Q9NZB8 636 aa20.58■□□□□ 0.88
PCDHB12-202ENST00000622978 MPP6Q9NZW5 540 aa20.58■□□□□ 0.88
PCDHB12-202ENST00000622978 COL4A6Q14031 1691 aa20.58■□□□□ 0.88
PCDHB12-202ENST00000622978 DNAJC8O75937 253 aaPredicted RBP20.57■□□□□ 0.88
PCDHB12-202ENST00000622978 KRT37O76014 449 aa20.57■□□□□ 0.88
PCDHB12-202ENST00000622978 CCNB1P14635 433 aa20.57■□□□□ 0.88
PCDHB12-202ENST00000622978 TAC1P20366 129 aa20.57■□□□□ 0.88
PCDHB12-202ENST00000622978 PRPSAP1Q14558 356 aa20.57■□□□□ 0.88
PCDHB12-202ENST00000622978 LGSNQ5TDP6 509 aa20.57■□□□□ 0.88
PCDHB12-202ENST00000622978 AFMIDQ63HM1 303 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms