RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 TSGA13Q96PP4 275 aa7.18□□□□□ -1.26
CBWD3-219ENST00000622817 PBX4Q9BYU1 374 aa7.18□□□□□ -1.26
CBWD3-219ENST00000622817 TXLNGYQ9BZA5 131 aa7.18□□□□□ -1.26
CBWD3-219ENST00000622817 NKX2-4Q9H2Z4 354 aa7.18□□□□□ -1.26
CBWD3-219ENST00000622817 ATXN3LQ9H3M9 355 aa7.18□□□□□ -1.26
CBWD3-219ENST00000622817 GKN1Q9NS71 199 aa7.18□□□□□ -1.26
CBWD3-219ENST00000622817 TMEM248Q9NWD8 314 aa7.18□□□□□ -1.26
CBWD3-219ENST00000622817 ZDHHC7Q9NXF8 308 aa7.18□□□□□ -1.26
CBWD3-219ENST00000622817 MPP6Q9NZW5 540 aa7.18□□□□□ -1.26
CBWD3-219ENST00000622817 ATP8A1Q9Y2Q0 1164 aa7.18□□□□□ -1.26
CBWD3-219ENST00000622817 MTCL1Q9Y4B5 1905 aaKnown RBP7.17□□□□□ -1.26
CBWD3-219ENST00000622817 TRAV19A0A0A6YYK7 116 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 GOLGA6L7A0A1B0GV03 622 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 GOLGA6BA6NDN3 693 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 SOBPA7XYQ1 873 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 DFFAO00273 331 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 CHADO15335 359 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 KLKB1P03952 638 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 POU2F2P09086 479 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 VAV1P15498 845 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 EPCAMP16422 314 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 CCNCP24863 283 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 DDX6P26196 483 aaKnown RBP eCLIP7.17□□□□□ -1.26
CBWD3-219ENST00000622817 HSD17B3P37058 310 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 FDFT1P37268 417 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 MAGEA6P43360 314 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 MAPKAPK2P49137 400 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 NDST2P52849 883 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 PMS2P54278 862 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 EPHA5P54756 1037 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 NRLP54845 237 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 BASP1P80723 227 aaKnown RBP7.17□□□□□ -1.26
CBWD3-219ENST00000622817 SLC7A9P82251 487 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 SMAD3P84022 425 aaKnown RBP7.17□□□□□ -1.26
CBWD3-219ENST00000622817 WASHC5Q12768 1159 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 GPS2Q13227 327 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 ARHGAP15Q53QZ3 475 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 FAM133BQ5BKY9 247 aaKnown RBP7.17□□□□□ -1.26
CBWD3-219ENST00000622817 ANKRD20A2Q5SQ80 823 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 ADGRF1Q5T601 910 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 CFAP58Q5T655 872 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 ANKRD20A1Q5TYW2 823 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 ANKRD20A3Q5VUR7 823 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 PPP2R2DQ66LE6 453 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 PPP1R21Q6ZMI0 780 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 TRMT10CQ7L0Y3 403 aaKnown RBP7.17□□□□□ -1.26
CBWD3-219ENST00000622817 CCDC25Q86WR0 208 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 ARHGAP12Q8IWW6 846 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 HOMEZQ8IX15 550 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 TP53INP2Q8IXH6 220 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 CCDC13Q8IYE1 715 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 ATPAF2Q8N5M1 289 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 ARL14EPQ8N8R7 260 aaPredicted RBP7.17□□□□□ -1.26
CBWD3-219ENST00000622817 NAT8LQ8N9F0 302 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 NETO2Q8NC67 525 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 TSEN2Q8NCE0 465 aaKnown RBP7.17□□□□□ -1.26
CBWD3-219ENST00000622817 CPT1BQ92523 772 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 PRCCQ92733 491 aaPredicted RBP7.17□□□□□ -1.26
CBWD3-219ENST00000622817 IGSF8Q969P0 613 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 CELF6Q96J87 481 aaKnown RBP7.17□□□□□ -1.26
CBWD3-219ENST00000622817 CYP2S1Q96SQ9 504 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 VAT1Q99536 393 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 FRMD8Q9BZ67 464 aaPredicted RBP7.17□□□□□ -1.26
CBWD3-219ENST00000622817 SLC28A3Q9HAS3 691 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 RAB6BQ9NRW1 208 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 SMPD4Q9NXE4 827 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 SEPT10Q9P0V9 454 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 STOML2Q9UJZ1 356 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 TRHDEQ9UKU6 1024 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 AGO1Q9UL18 857 aaKnown RBP7.17□□□□□ -1.26
CBWD3-219ENST00000622817 MYO7AQ13402 2215 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 A0A1W2PRU2 124 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 ARHGAP42A6NI28 874 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 H0YGN5 161 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 PER2O15055 1255 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 RFPL2O75678 378 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 CNTN5O94779 1100 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 CKMP06732 381 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 IRF1P10914 325 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 CHKAP35790 457 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 ARL4CP56559 192 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 CYP4F8P98187 520 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 KCNJ11Q14654 390 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 ALFQ53S48 1182 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 TIGD7Q6NT04 549 aaPredicted RBP7.17□□□□□ -1.26
CBWD3-219ENST00000622817 CENPUQ71F23 418 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 TFAP2DQ7Z6R9 452 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 RELL1Q8IUW5 271 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 IQCKQ8N0W5 287 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 TAB3Q8N5C8 712 aaPredicted RBP7.17□□□□□ -1.26
CBWD3-219ENST00000622817 MAB21L3Q8N8X9 362 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 UBLCP1Q8WVY7 318 aaPredicted RBP7.17□□□□□ -1.26
CBWD3-219ENST00000622817 ARNTL2Q8WYA1 636 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 EXOC4Q96A65 974 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 ZFRQ96KR1 1074 aaKnown RBP7.17□□□□□ -1.26
CBWD3-219ENST00000622817 SLC22A12Q96S37 553 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 RBM15Q96T37 977 aaKnown RBP eCLIP7.17□□□□□ -1.26
CBWD3-219ENST00000622817 RUFY1Q96T51 708 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 PRKD2Q9BZL6 878 aa7.17□□□□□ -1.26
CBWD3-219ENST00000622817 PHACTR1Q9C0D0 580 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms