RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 CHRNB2P17787 502 aa16.45■□□□□ 0.22
GABRB3-215ENST00000622697 TRIM60Q495X7 471 aa16.45■□□□□ 0.22
GABRB3-215ENST00000622697 AARS2Q5JTZ9 985 aaKnown RBP16.45■□□□□ 0.22
GABRB3-215ENST00000622697 FAM171A1Q5VUB5 890 aa16.45■□□□□ 0.22
GABRB3-215ENST00000622697 CMC1Q7Z7K0 106 aa16.45■□□□□ 0.22
GABRB3-215ENST00000622697 FNDC5Q8NAU1 212 aa16.45■□□□□ 0.22
GABRB3-215ENST00000622697 TRPM4Q8TD43 1214 aa16.45■□□□□ 0.22
GABRB3-215ENST00000622697 LPPQ93052 612 aa16.45■□□□□ 0.22
GABRB3-215ENST00000622697 ALG9Q9H6U8 611 aa16.45■□□□□ 0.22
GABRB3-215ENST00000622697 FAM208AQ9UK61 1670 aaKnown RBP16.45■□□□□ 0.22
GABRB3-215ENST00000622697 MAPK10P53779 464 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 GFM2Q969S9 779 aaKnown RBP16.44■□□□□ 0.22
GABRB3-215ENST00000622697 TMEM169Q96HH4 297 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 CAB39LQ9H9S4 337 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 VTI1BQ9UEU0 232 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 ZMYM5Q9UJ78 669 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 NKRFO15226 690 aaKnown RBP eCLIP16.44■□□□□ 0.22
GABRB3-215ENST00000622697 FARP2O94887 1054 aaPredicted RBP16.44■□□□□ 0.22
GABRB3-215ENST00000622697 LYPLA2O95372 231 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 WEE1P30291 646 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 MON1BQ7L1V2 547 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 VPS37AQ8NEZ2 397 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 TNIP2Q8NFZ5 429 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 DAB1O75553 588 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 LRRC8BQ6P9F7 803 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 B3GALNT2Q8NCR0 500 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 MBOAT7Q96N66 472 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 NDUFAF1Q9Y375 327 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 S100A5P33763 92 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 CDK7P50613 346 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 ZNF280DQ6N043 979 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 C10orf107Q8IVU9 208 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 DNAJC5Q9H3Z4 198 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 ADGRA3Q8IWK6 1321 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 STRNO43815 780 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 FECHP22830 423 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 PLEKHA7Q6IQ23 1121 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 NEPROQ6NW34 567 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 KCTD4Q8WVF5 259 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 MPP4Q96JB8 637 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 TLR8Q9NR97 1041 aaKnown RBP16.44■□□□□ 0.22
GABRB3-215ENST00000622697 ARL8BQ9NVJ2 186 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 TRPM5Q9NZQ8 1165 aa16.44■□□□□ 0.22
GABRB3-215ENST00000622697 SHOX2O60902 331 aaPredicted RBP16.43■□□□□ 0.22
GABRB3-215ENST00000622697 TOMM70O94826 608 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 ITGA2BP08514 1039 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 ARF4P18085 180 aaPredicted RBP16.43■□□□□ 0.22
GABRB3-215ENST00000622697 PRIM2P49643 509 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 ATN1P54259 1190 aaPredicted RBP16.43■□□□□ 0.22
GABRB3-215ENST00000622697 GPC2Q8N158 579 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 NR1H4Q96RI1 486 aaPredicted RBP16.43■□□□□ 0.22
GABRB3-215ENST00000622697 DCUN1D5Q9BTE7 237 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 SEMA4BQ9NPR2 832 aaPredicted RBP16.43■□□□□ 0.22
GABRB3-215ENST00000622697 MMP14P50281 582 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 CCNG1P51959 295 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 NFE2Q16621 373 aaPredicted RBP16.43■□□□□ 0.22
GABRB3-215ENST00000622697 LGI2Q8N0V4 545 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 C18orf25Q96B23 403 aaPredicted RBP16.43■□□□□ 0.22
GABRB3-215ENST00000622697 RERGLQ9H628 205 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 WDR41Q9HAD4 459 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 GOLGA2P5Q9HBQ8 144 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 ATP13A1Q9HD20 1204 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 PNPOQ9NVS9 261 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 IGKV6D-41A0A0C4DH26 115 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 DNM1LO00429 736 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 BTN3A1O00481 513 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 GRIA4P48058 902 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 NEK2P51955 445 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 USP4Q13107 963 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 CTBP1Q13363 440 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 ASTE1Q2TB18 679 aaPredicted RBP16.43■□□□□ 0.22
GABRB3-215ENST00000622697 ANKRD22Q5VYY1 191 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 LRRC8DQ7L1W4 858 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 C16orf59Q7L2K0 433 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 M0R2N6 131 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 LRG1P02750 347 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 TAF5Q15542 800 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 UNC93AQ86WB7 457 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 ANKRD52Q8NB46 1076 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 ADGRE3Q9BY15 652 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 UBXN6Q9BZV1 441 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 ACTR8Q9H981 624 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 PCDH18Q9HCL0 1135 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 BTBD7Q9P203 1132 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 PCDHB5Q9Y5E4 795 aa16.43■□□□□ 0.22
GABRB3-215ENST00000622697 PRR23AA6NEV1 266 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 CCDC166P0CW27 439 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 ITGALP20701 1170 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 FASP25445 335 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 EPHA3P29320 983 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 PTGIRP43119 386 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 SENP6Q9GZR1 1112 aaPredicted RBP16.42■□□□□ 0.22
GABRB3-215ENST00000622697 ANKRD6Q9Y2G4 727 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 ATP4AP20648 1035 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 MSX2P35548 267 aaPredicted RBP16.42■□□□□ 0.22
GABRB3-215ENST00000622697 CD86P42081 329 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 RTP1P59025 263 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 KIAA2013Q8IYS2 634 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 IL22Q9GZX6 179 aa16.42■□□□□ 0.22
GABRB3-215ENST00000622697 RRN3Q9NYV6 651 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms