RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 DUS2Q9NX74 493 aaKnown RBP18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 DRG1Q9Y295 367 aaKnown RBP18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 CHD5Q8TDI0 1954 aa18.28■□□□□ 0.52
PTCHD3-202ENST00000622555 PPP1R12AO14974 1030 aaPredicted RBP18.28■□□□□ 0.52
PTCHD3-202ENST00000622555 NCAM2O15394 837 aa18.28■□□□□ 0.52
PTCHD3-202ENST00000622555 RAD51CO43502 376 aa18.28■□□□□ 0.52
PTCHD3-202ENST00000622555 ITGAVP06756 1048 aa18.28■□□□□ 0.52
PTCHD3-202ENST00000622555 MX2P20592 715 aa18.28■□□□□ 0.52
PTCHD3-202ENST00000622555 SP100P23497 879 aaPredicted RBP18.28■□□□□ 0.52
PTCHD3-202ENST00000622555 GALNT2Q10471 571 aa18.28■□□□□ 0.52
PTCHD3-202ENST00000622555 SMAD4Q13485 552 aaKnown RBP18.28■□□□□ 0.52
PTCHD3-202ENST00000622555 DHX34Q14147 1143 aaKnown RBP18.28■□□□□ 0.52
PTCHD3-202ENST00000622555 CCDC70Q6NSX1 233 aa18.28■□□□□ 0.52
PTCHD3-202ENST00000622555 GSTA5Q7RTV2 222 aa18.28■□□□□ 0.52
PTCHD3-202ENST00000622555 CDKL3Q8IVW4 592 aaPredicted RBP18.28■□□□□ 0.52
PTCHD3-202ENST00000622555 ARHGAP12Q8IWW6 846 aa18.28■□□□□ 0.52
PTCHD3-202ENST00000622555 CARNMT1Q8N4J0 409 aa18.28■□□□□ 0.52
PTCHD3-202ENST00000622555 CCNYQ8ND76 341 aa18.28■□□□□ 0.52
PTCHD3-202ENST00000622555 GRK7Q8WTQ7 553 aa18.28■□□□□ 0.52
PTCHD3-202ENST00000622555 TFB1MQ8WVM0 346 aaKnown RBP18.28■□□□□ 0.52
PTCHD3-202ENST00000622555 E2F7Q96AV8 911 aa18.28■□□□□ 0.52
PTCHD3-202ENST00000622555 SLC39A8Q9C0K1 460 aa18.28■□□□□ 0.52
PTCHD3-202ENST00000622555 NOL6Q9H6R4 1146 aaKnown RBP18.28■□□□□ 0.52
PTCHD3-202ENST00000622555 FEZ2Q9UHY8 353 aaPredicted RBP18.28■□□□□ 0.52
PTCHD3-202ENST00000622555 KIF26AQ9ULI4 1882 aaPredicted RBP18.27■□□□□ 0.52
PTCHD3-202ENST00000622555 HACD1B0YJ81 288 aa18.27■□□□□ 0.52
PTCHD3-202ENST00000622555 TTI1O43156 1089 aa18.27■□□□□ 0.52
PTCHD3-202ENST00000622555 RAMP2O60895 175 aa18.27■□□□□ 0.52
PTCHD3-202ENST00000622555 ECEL1O95672 775 aa18.27■□□□□ 0.52
PTCHD3-202ENST00000622555 RHOXF2BP0C7M4 288 aa18.27■□□□□ 0.52
PTCHD3-202ENST00000622555 IFNAR2P48551 515 aa18.27■□□□□ 0.52
PTCHD3-202ENST00000622555 NDST2P52849 883 aa18.27■□□□□ 0.52
PTCHD3-202ENST00000622555 LMNB2Q03252 620 aa18.27■□□□□ 0.52
PTCHD3-202ENST00000622555 SLC45A4Q5BKX6 768 aa18.27■□□□□ 0.52
PTCHD3-202ENST00000622555 AFMIDQ63HM1 303 aa18.27■□□□□ 0.52
PTCHD3-202ENST00000622555 OTOP3Q7RTS5 596 aa18.27■□□□□ 0.52
PTCHD3-202ENST00000622555 MAATS1Q7Z4T9 603 aa18.27■□□□□ 0.52
PTCHD3-202ENST00000622555 OSCP1Q8WVF1 389 aa18.27■□□□□ 0.52
PTCHD3-202ENST00000622555 HLA-CQ95604 372 aa18.27■□□□□ 0.52
PTCHD3-202ENST00000622555 QKIQ96PU8 341 aaKnown RBP eCLIP18.27■□□□□ 0.52
PTCHD3-202ENST00000622555 LGMNQ99538 433 aa18.27■□□□□ 0.52
PTCHD3-202ENST00000622555 RHOXF2Q9BQY4 288 aa18.27■□□□□ 0.52
PTCHD3-202ENST00000622555 SPHK2Q9NRA0 654 aa18.27■□□□□ 0.52
PTCHD3-202ENST00000622555 THG1LQ9NWX6 298 aaKnown RBP18.27■□□□□ 0.52
PTCHD3-202ENST00000622555 PLK2Q9NYY3 685 aa18.27■□□□□ 0.52
PTCHD3-202ENST00000622555 RASA4BC9J798 803 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 H0Y626 953 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 SGK1O00141 431 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 RASA4O43374 803 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 MBTPS2O43462 519 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 LUC7L3O95232 432 aaKnown RBP18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 GARSP41250 739 aaKnown RBP18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 PTGIRP43119 386 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 AP1B1Q10567 949 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 CDH18Q13634 790 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 POLD3Q15054 466 aaPredicted RBP18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 KCTD19Q17RG1 926 aaPredicted RBP18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 MPP7Q5T2T1 576 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 C6orf118Q5T5N4 469 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 VITQ6UXI7 678 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 TMEM25Q86YD3 366 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 ATPAF2Q8N5M1 289 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 RSAD2Q8WXG1 361 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 IRF7Q92985 503 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 P2RY11Q96G91 374 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 KXD1Q9BQD3 176 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 BCLAF3A2AJT9 711 aaKnown RBP18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 ARHGAP42A6NI28 874 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 GAS8O95995 478 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 RHOCP08134 193 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 HOXD9P28356 352 aaPredicted RBP18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 RBL1P28749 1068 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 PRKD1Q15139 912 aaPredicted RBP18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 ANO4Q32M45 955 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 GLE1Q53GS7 698 aaKnown RBP18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 LY6G5CQ5SRR4 150 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 TRIM68Q6AZZ1 485 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 PARM1Q6UWI2 310 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 SETD3Q86TU7 594 aaPredicted RBP18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 ZNF354CQ86Y25 554 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 JAMLQ86YT9 394 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 MFN1Q8IWA4 741 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 CCDC117Q8IWD4 279 aaPredicted RBP18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 ADGRG2Q8IZP9 1017 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 ALLCQ8N6M5 410 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 SLCO2A1Q92959 643 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 HMCESQ96FZ2 354 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 BBS2Q9BXC9 721 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 BRD8Q9H0E9 1235 aa18.26■□□□□ 0.51
PTCHD3-202ENST00000622555 CFAP69A5D8W1 941 aa18.25■□□□□ 0.51
PTCHD3-202ENST00000622555 NEDD8-MDP1E9PL57 170 aa18.25■□□□□ 0.51
PTCHD3-202ENST00000622555 KCNN4O15554 427 aa18.25■□□□□ 0.51
PTCHD3-202ENST00000622555 PAPOLAP51003 745 aaKnown RBP18.25■□□□□ 0.51
PTCHD3-202ENST00000622555 YBEYP58557 167 aaPredicted RBP18.25■□□□□ 0.51
PTCHD3-202ENST00000622555 SLC7A5Q01650 507 aa18.25■□□□□ 0.51
PTCHD3-202ENST00000622555 GNA12Q03113 381 aa18.25■□□□□ 0.51
PTCHD3-202ENST00000622555 PPP1R7Q15435 360 aa18.25■□□□□ 0.51
PTCHD3-202ENST00000622555 EML3Q32P44 896 aa18.25■□□□□ 0.51
PTCHD3-202ENST00000622555 PARP15Q460N3 678 aa18.25■□□□□ 0.51
PTCHD3-202ENST00000622555 FYB2Q5VWT5 728 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms