RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 TTC8Q8TAM2 541 aa17.9■□□□□ 0.46
FAM3A-222ENST00000621967 HSFY1Q96LI6 401 aa17.9■□□□□ 0.46
FAM3A-222ENST00000621967 ZNF558Q96NG5 402 aa17.9■□□□□ 0.46
FAM3A-222ENST00000621967 LRRC42Q9Y546 428 aa17.9■□□□□ 0.46
FAM3A-222ENST00000621967 MAD1L1Q9Y6D9 718 aa17.9■□□□□ 0.46
FAM3A-222ENST00000621967 A0A0A0MRY4 1105 aa17.89■□□□□ 0.45
FAM3A-222ENST00000621967 CARNS1A5YM72 827 aa17.89■□□□□ 0.45
FAM3A-222ENST00000621967 GRXCR1A8MXD5 290 aa17.89■□□□□ 0.45
FAM3A-222ENST00000621967 FCHO1O14526 889 aa17.89■□□□□ 0.45
FAM3A-222ENST00000621967 SPTLC1O15269 473 aa17.89■□□□□ 0.45
FAM3A-222ENST00000621967 BIRC5O15392 142 aa17.89■□□□□ 0.45
FAM3A-222ENST00000621967 SNNO75324 88 aaPredicted RBP17.89■□□□□ 0.45
FAM3A-222ENST00000621967 ENTPD5O75356 428 aa17.89■□□□□ 0.45
FAM3A-222ENST00000621967 TADA2AO75478 443 aa17.89■□□□□ 0.45
FAM3A-222ENST00000621967 VAV1P15498 845 aa17.89■□□□□ 0.45
FAM3A-222ENST00000621967 FDFT1P37268 417 aa17.89■□□□□ 0.45
FAM3A-222ENST00000621967 GRIA1P42261 906 aa17.89■□□□□ 0.45
FAM3A-222ENST00000621967 DBN1Q16643 649 aa17.89■□□□□ 0.45
FAM3A-222ENST00000621967 HSF5Q4G112 596 aaPredicted RBP17.89■□□□□ 0.45
FAM3A-222ENST00000621967 CMPK2Q5EBM0 449 aa17.89■□□□□ 0.45
FAM3A-222ENST00000621967 FAM109BQ6ICB4 259 aaPredicted RBP17.89■□□□□ 0.45
FAM3A-222ENST00000621967 MARK2Q7KZI7 788 aaKnown RBP17.89■□□□□ 0.45
FAM3A-222ENST00000621967 LIMS2Q7Z4I7 341 aa17.89■□□□□ 0.45
FAM3A-222ENST00000621967 TDHQ8IZJ6 230 aa17.89■□□□□ 0.45
FAM3A-222ENST00000621967 HTR3CQ8WXA8 447 aa17.89■□□□□ 0.45
FAM3A-222ENST00000621967 SPATA13Q96N96 652 aa17.89■□□□□ 0.45
FAM3A-222ENST00000621967 MMADHCQ9H3L0 296 aaPredicted RBP17.89■□□□□ 0.45
FAM3A-222ENST00000621967 DCLRE1BQ9H816 532 aa17.89■□□□□ 0.45
FAM3A-222ENST00000621967 GDAP2Q9NXN4 497 aa17.89■□□□□ 0.45
FAM3A-222ENST00000621967 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.89■□□□□ 0.45
FAM3A-222ENST00000621967 LCHNA4D1U4 455 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 C2orf71A6NGG8 1288 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 NT5C1B-RDH14C9J2C7 533 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 F8W810 466 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 TMEM189-UBE2V1I3L0A0 370 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 ITGB1P05556 798 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 BPGMP07738 259 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 LCP1P13796 627 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 AMPD1P23109 780 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 PAX3P23760 479 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 ADORA2BP29275 332 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 TMPRSS15P98073 1019 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 CHI3L2Q15782 390 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 STXBP5Q5T5C0 1151 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 RFWD3Q6PCD5 774 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 CHRDL2Q6WN34 429 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 DSTYKQ6XUX3 929 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 BZW1Q7L1Q6 419 aaKnown RBP17.88■□□□□ 0.45
FAM3A-222ENST00000621967 TTC7BQ86TV6 843 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 PSTKQ8IV42 348 aaKnown RBP17.88■□□□□ 0.45
FAM3A-222ENST00000621967 SP7Q8TDD2 431 aaPredicted RBP17.88■□□□□ 0.45
FAM3A-222ENST00000621967 KCNV2Q8TDN2 545 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 TFB1MQ8WVM0 346 aaKnown RBP17.88■□□□□ 0.45
FAM3A-222ENST00000621967 SLC13A1Q9BZW2 595 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 NMUR2Q9GZQ4 415 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 EIF2B3Q9NR50 452 aaKnown RBP17.88■□□□□ 0.45
FAM3A-222ENST00000621967 ARHGEF4Q9NR80 690 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 PCMTD2Q9NV79 361 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 TAS2R1Q9NYW7 299 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 FZD10Q9ULW2 581 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 LAMA3Q16787 3333 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 CAPN14A8MX76 684 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 GOT1P17174 413 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 IGFBP6P24592 240 aaPredicted RBP17.88■□□□□ 0.45
FAM3A-222ENST00000621967 MATKP42679 507 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 SARNPP82979 210 aaKnown RBP17.88■□□□□ 0.45
FAM3A-222ENST00000621967 NIPAL4Q0D2K0 466 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 EFHC1Q5JVL4 640 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 MROH9Q5TGP6 573 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 RINLQ6ZS11 566 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 NUDCD3Q8IVD9 361 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.88■□□□□ 0.45
FAM3A-222ENST00000621967 NDUFAF2Q8N183 169 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 STKLD1Q8NE28 680 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 DEPDC1BQ8WUY9 529 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 MIEF2Q96C03 454 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 DNAI2Q9GZS0 605 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 ADAM28Q9UKQ2 775 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 MFHAS1Q9Y4C4 1052 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 PCDHB12Q9Y5F1 795 aa17.88■□□□□ 0.45
FAM3A-222ENST00000621967 SF3B1O75533 1304 aaKnown RBP eCLIP17.87■□□□□ 0.453e-6■■■■■ 137.9
FAM3A-222ENST00000621967 CYB561D2O14569 222 aa17.87■□□□□ 0.45
FAM3A-222ENST00000621967 GYG2O15488 501 aa17.87■□□□□ 0.45
FAM3A-222ENST00000621967 HUS1O60921 280 aa17.87■□□□□ 0.45
FAM3A-222ENST00000621967 ATP5BP06576 529 aaKnown RBP17.87■□□□□ 0.45
FAM3A-222ENST00000621967 LMO2P25791 158 aa17.87■□□□□ 0.45
FAM3A-222ENST00000621967 GNL1P36915 607 aaPredicted RBP17.87■□□□□ 0.45
FAM3A-222ENST00000621967 BRCC3P46736 316 aa17.87■□□□□ 0.45
FAM3A-222ENST00000621967 DENND5BQ6ZUT9 1274 aa17.87■□□□□ 0.45
FAM3A-222ENST00000621967 BNIPLQ7Z465 357 aa17.87■□□□□ 0.45
FAM3A-222ENST00000621967 ADGRF2Q8IZF7 708 aa17.87■□□□□ 0.45
FAM3A-222ENST00000621967 COLGALT1Q8NBJ5 622 aa17.87■□□□□ 0.45
FAM3A-222ENST00000621967 SENP8Q96LD8 212 aa17.87■□□□□ 0.45
FAM3A-222ENST00000621967 MARCH5Q9NX47 278 aa17.87■□□□□ 0.45
FAM3A-222ENST00000621967 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.86■□□□□ 0.45
FAM3A-222ENST00000621967 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.86■□□□□ 0.45
FAM3A-222ENST00000621967 ARHGEF37A1IGU5 675 aa17.86■□□□□ 0.45
FAM3A-222ENST00000621967 PDGFRBP09619 1106 aa17.86■□□□□ 0.45
FAM3A-222ENST00000621967 ESRRAP11474 423 aaPredicted RBP17.86■□□□□ 0.45
FAM3A-222ENST00000621967 PPM1AP35813 382 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms