RNA–Protein interactions for RNA: ENST00000620502.4

BRCC3-209, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-209ENST00000620502 POPDC2Q9HBU9 364 aa6.78□□□□□ -1.32
BRCC3-209ENST00000620502 SPATA6Q9NWH7 488 aaPredicted RBP6.78□□□□□ -1.32
BRCC3-209ENST00000620502 CALCOCO1Q9P1Z2 691 aa6.78□□□□□ -1.32
BRCC3-209ENST00000620502 WDR35Q9P2L0 1181 aa6.78□□□□□ -1.32
BRCC3-209ENST00000620502 FBXO10Q9UK96 956 aa6.78□□□□□ -1.32
BRCC3-209ENST00000620502 MYO6Q9UM54 1294 aa6.78□□□□□ -1.32
BRCC3-209ENST00000620502 SOX13Q9UN79 622 aa6.78□□□□□ -1.32
BRCC3-209ENST00000620502 TLR6Q9Y2C9 796 aa6.78□□□□□ -1.32
BRCC3-209ENST00000620502 GOLGA6L7A0A1B0GV03 622 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 A0A1W2PP55 124 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 LRRC53A6NM62 1247 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 NEDD8-MDP1E9PL57 170 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 EIF1AYO14602 144 aaKnown RBP6.77□□□□□ -1.33
BRCC3-209ENST00000620502 CAPN9O14815 690 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 CACNG3O60359 315 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 HSF2BPO75031 334 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 DAB1O75553 588 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 GRAP2O75791 330 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 KAT7O95251 611 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 LATS1O95835 1130 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 TRUB2O95900 331 aaKnown RBP6.77□□□□□ -1.33
BRCC3-209ENST00000620502 SP9P0CG40 484 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 TYRP14679 529 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 FERP16591 822 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 MMP8P22894 467 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 HOXC13P31276 330 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 SLC6A4P31645 630 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 CHKAP35790 457 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 KIR2DL1P43626 348 aaPredicted RBP6.77□□□□□ -1.33
BRCC3-209ENST00000620502 GATA4P43694 442 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 HARS2P49590 506 aaKnown RBP6.77□□□□□ -1.33
BRCC3-209ENST00000620502 TBX4P57082 545 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 SATB1Q01826 763 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 NHLH1Q02575 133 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 ARID5AQ03989 594 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 CSTF1Q05048 431 aaKnown RBP6.77□□□□□ -1.33
BRCC3-209ENST00000620502 ZNF528Q3MIS6 628 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 FBXO43Q4G163 708 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 DCAF6Q58WW2 860 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 ADGRF1Q5T601 910 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 EMC10Q5UCC4 262 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 OTUD1Q5VV17 481 aaPredicted RBP6.77□□□□□ -1.33
BRCC3-209ENST00000620502 NAA35Q5VZE5 725 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 E4F1Q66K89 784 aaPredicted RBP6.77□□□□□ -1.33
BRCC3-209ENST00000620502 NADSYN1Q6IA69 706 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 TRNP1Q6NT89 227 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 TSSK4Q6SA08 328 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 MMS22LQ6ZRQ5 1243 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 TAC4Q86UU9 113 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 SLC30A5Q8TAD4 765 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 IPO4Q8TEX9 1081 aaKnown RBP6.77□□□□□ -1.33
BRCC3-209ENST00000620502 USP33Q8TEY7 942 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 NT5C3BQ969T7 300 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 EXOC4Q96A65 974 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 FAM149B1Q96BN6 582 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 SERPINB11Q96P15 392 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 TRIM62Q9BVG3 475 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 BBS2Q9BXC9 721 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 EDEM3Q9BZQ6 932 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 PRMT8Q9NR22 394 aaPredicted RBP6.77□□□□□ -1.33
BRCC3-209ENST00000620502 POLR3BQ9NW08 1133 aaPredicted RBP6.77□□□□□ -1.33
BRCC3-209ENST00000620502 PLK2Q9NYY3 685 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 AIPL1Q9NZN9 384 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 IFNKQ9P0W0 207 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 TMEM59LQ9UK28 342 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 FBXO4Q9UKT5 387 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 CLEC4EQ9ULY5 219 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 CEP83Q9Y592 693 aa6.77□□□□□ -1.33
BRCC3-209ENST00000620502 FANCMQ8IYD8 2048 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 A0A1W2PQJ5 194 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 TCRBV5S1A1TA0A578 114 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 KCNU1A8MYU2 1149 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.76□□□□□ -1.33
BRCC3-209ENST00000620502 PRRT4C9JH25 899 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 K7ESF4 209 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 IRAK2O43187 625 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 AP5Z1O43299 807 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 LAMTOR5O43504 91 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 ACSL4O60488 711 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 TSPAN3O60637 253 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 ATG13O75143 517 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 PAPSS2O95340 614 aaPredicted RBP6.76□□□□□ -1.33
BRCC3-209ENST00000620502 TFE3P19532 575 aaPredicted RBP6.76□□□□□ -1.33
BRCC3-209ENST00000620502 CDC25BP30305 580 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 PRKCIP41743 596 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 GRIA2P42262 883 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 MATKP42679 507 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 TNFRSF4P43489 277 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 CXCL12P48061 93 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 CCR3P51677 355 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 SGSHP51688 502 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 CDK17Q00537 523 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 KDSRQ06136 332 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 DMWDQ09019 674 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 CLEC16AQ2KHT3 1053 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 MPPE1Q53F39 396 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 FAM133BQ5BKY9 247 aaKnown RBP6.76□□□□□ -1.33
BRCC3-209ENST00000620502 ZC3H12AQ5D1E8 599 aaKnown RBP6.76□□□□□ -1.33
BRCC3-209ENST00000620502 SFMBT2Q5VUG0 894 aa6.76□□□□□ -1.33
BRCC3-209ENST00000620502 NUGGCQ68CJ6 796 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms