RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 YBEYP58557 167 aaPredicted RBP8.24□□□□□ -1.09
CPNE3-209ENST00000620393 EIF3EP60228 445 aaKnown RBP8.24□□□□□ -1.09
CPNE3-209ENST00000620393 C2orf54Q08AI8 447 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 ZNF177Q13360 481 aaPredicted RBP8.24□□□□□ -1.09
CPNE3-209ENST00000620393 SNX1Q13596 522 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 BYSLQ13895 437 aaKnown RBP8.24□□□□□ -1.09
CPNE3-209ENST00000620393 PDK1Q15118 436 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 NOMO1Q15155 1222 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 LEXMQ3ZCV2 418 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 RHBDF2Q6PJF5 856 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 TMEM25Q86YD3 366 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 LRRC49Q8IUZ0 686 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 KLHL7Q8IXQ5 586 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 HJURPQ8NCD3 748 aaPredicted RBP8.24□□□□□ -1.09
CPNE3-209ENST00000620393 CCDC26Q8TAB7 109 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 DDI1Q8WTU0 396 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 OSCP1Q8WVF1 389 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 ATG4AQ8WYN0 398 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 ELSPBP1Q96BH3 223 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 HAUS1Q96CS2 278 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 PRICKLE1Q96MT3 831 aaPredicted RBP8.24□□□□□ -1.09
CPNE3-209ENST00000620393 RUNDC3BQ96NL0 473 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 OLFM3Q96PB7 478 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 KRT12Q99456 494 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 FAM118BQ9BPY3 351 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 FAM83CQ9BQN1 747 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 SLC39A8Q9C0K1 460 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 BRD8Q9H0E9 1235 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 DDX47Q9H0S4 455 aaKnown RBP8.24□□□□□ -1.09
CPNE3-209ENST00000620393 NOL6Q9H6R4 1146 aaKnown RBP8.24□□□□□ -1.09
CPNE3-209ENST00000620393 SPHK2Q9NRA0 654 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 NDFIP2Q9NV92 336 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 THG1LQ9NWX6 298 aaKnown RBP8.24□□□□□ -1.09
CPNE3-209ENST00000620393 DUS2Q9NX74 493 aaKnown RBP8.24□□□□□ -1.09
CPNE3-209ENST00000620393 PCYOX1Q9UHG3 505 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 DNPEPQ9ULA0 475 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 TBC1D30Q9Y2I9 924 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 WNT6Q9Y6F9 365 aa8.24□□□□□ -1.09
CPNE3-209ENST00000620393 CDH23Q9H251 3354 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 A0A1B0GVM2 712 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 ILVBLA1L0T0 632 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 BCLAF3A2AJT9 711 aaKnown RBP8.23□□□□□ -1.09
CPNE3-209ENST00000620393 TYW5A2RUC4 315 aaKnown RBP8.23□□□□□ -1.09
CPNE3-209ENST00000620393 TCAF2A6NFQ2 919 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 EFCAB8A8MWE9 144 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 HACD1B0YJ81 288 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 RASA4BC9J798 803 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 ANHXE9PGG2 379 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 H7C0C1 242 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 MCF2LO15068 1137 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 MAP3K7O43318 606 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 RASA4O43374 803 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 MFSD11O43934 449 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 ECI2O75521 394 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 LUC7L3O95232 432 aaKnown RBP8.23□□□□□ -1.09
CPNE3-209ENST00000620393 ITGAVP06756 1048 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 RBP3P10745 1247 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 PSMC3P17980 439 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 OR1E1P30953 314 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 PTGIRP43119 386 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 ATP5OP48047 213 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 IFNAR2P48551 515 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 LMNB2Q03252 620 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 ZNF33AQ06730 810 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 FCHO2Q0JRZ9 810 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 GALNT2Q10471 571 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 PDGFRLQ15198 375 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 DHCR24Q15392 516 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 OASLQ15646 514 aaKnown RBP8.23□□□□□ -1.09
CPNE3-209ENST00000620393 EML3Q32P44 896 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 GLE1Q53GS7 698 aaKnown RBP8.23□□□□□ -1.09
CPNE3-209ENST00000620393 LY6G5CQ5SRR4 150 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 C6orf118Q5T5N4 469 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 FYB2Q5VWT5 728 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 RNF43Q68DV7 783 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 TTC27Q6P3X3 843 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 DARS2Q6PI48 645 aaKnown RBP8.23□□□□□ -1.09
CPNE3-209ENST00000620393 CCDC137Q6PK04 289 aaKnown RBP8.23□□□□□ -1.09
CPNE3-209ENST00000620393 PARM1Q6UWI2 310 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 VITQ6UXI7 678 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 ZNF783Q6ZMS7 281 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 TPGS1Q6ZTW0 290 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 MTSS1LQ765P7 747 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 MAATS1Q7Z4T9 603 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 TFAP2DQ7Z6R9 452 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 SETD3Q86TU7 594 aaPredicted RBP8.23□□□□□ -1.09
CPNE3-209ENST00000620393 ZC3H18Q86VM9 953 aaKnown RBP8.23□□□□□ -1.09
CPNE3-209ENST00000620393 CIR1Q86X95 450 aaPredicted RBP8.23□□□□□ -1.09
CPNE3-209ENST00000620393 ARHGAP12Q8IWW6 846 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 TP53INP2Q8IXH6 220 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 CCDC105Q8IYK2 499 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 NPWQ8N729 165 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 NOA1Q8NC60 698 aaKnown RBP8.23□□□□□ -1.09
CPNE3-209ENST00000620393 LRRN4CLQ8ND94 238 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 FIBINQ8TAL6 211 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 TFB1MQ8WVM0 346 aaKnown RBP8.23□□□□□ -1.09
CPNE3-209ENST00000620393 SLCO2A1Q92959 643 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 P2RY11Q96G91 374 aa8.23□□□□□ -1.09
CPNE3-209ENST00000620393 CELF6Q96J87 481 aaKnown RBP8.23□□□□□ -1.09
CPNE3-209ENST00000620393 TSGA13Q96PP4 275 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms