RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 TTC8Q8TAM2 541 aa3.25□□□□□ -1.89
TARDBP-220ENST00000618606 FZD10Q9ULW2 581 aa3.25□□□□□ -1.89
TARDBP-220ENST00000618606 CA14Q9ULX7 337 aa3.25□□□□□ -1.89
TARDBP-220ENST00000618606 MAN2B2Q9Y2E5 1009 aa3.25□□□□□ -1.89
TARDBP-220ENST00000618606 DTNAQ9Y4J8 743 aa3.25□□□□□ -1.89
TARDBP-220ENST00000618606 CYP3A7-CYP3A51PA0A087WV96 503 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 PNMA6EA0A0J9YXQ4 647 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 DENND3A2RUS2 1198 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 J3KTA2 159 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 PQBP1O60828 265 aaKnown RBP3.24□□□□□ -1.89
TARDBP-220ENST00000618606 ZBTB11O95625 1053 aaPredicted RBP3.24□□□□□ -1.89
TARDBP-220ENST00000618606 NTSR2O95665 410 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 PRSS2P07478 247 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 CYP3A4P08684 503 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 CYP3A7P24462 503 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 ADPRHP54922 357 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 FOXL2P58012 376 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 TLE3Q04726 772 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 DDR1Q08345 913 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 TRAF2Q12933 501 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 COASYQ13057 564 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 GALNT3Q14435 633 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 AAK1Q2M2I8 961 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 TDRD12Q587J7 1177 aaKnown RBP3.24□□□□□ -1.89
TARDBP-220ENST00000618606 ALG10Q5BKT4 473 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 ALG10BQ5I7T1 473 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 C9orf57Q5W0N0 161 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.24□□□□□ -1.891e-28■■■■■ 32.6
TARDBP-220ENST00000618606 MDGA2Q7Z553 956 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 C14orf80Q86SX3 495 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 TTC30AQ86WT1 665 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 CAMK1DQ8IU85 385 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 RASGRP3Q8IV61 690 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 IP6K1Q92551 441 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 ADAD1Q96M93 576 aaKnown RBP3.24□□□□□ -1.89
TARDBP-220ENST00000618606 KRTAP4-3Q9BYR4 195 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 ZNF304Q9HCX3 659 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 HELLSQ9NRZ9 838 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 TCEAL9Q9UHQ7 104 aa3.24□□□□□ -1.89
TARDBP-220ENST00000618606 TRBV5-7A0A0A0MS05 114 aa3.23□□□□□ -1.89
TARDBP-220ENST00000618606 C3orf70A6NLC5 250 aaPredicted RBP3.23□□□□□ -1.89
TARDBP-220ENST00000618606 APOL1O14791 398 aa3.23□□□□□ -1.89
TARDBP-220ENST00000618606 KPNA5O15131 536 aa3.23□□□□□ -1.89
TARDBP-220ENST00000618606 MSI1O43347 362 aaKnown RBP3.23□□□□□ -1.89
TARDBP-220ENST00000618606 S100BP04271 92 aaPredicted RBP3.23□□□□□ -1.89
TARDBP-220ENST00000618606 FCGR1AP12314 374 aa3.23□□□□□ -1.89
TARDBP-220ENST00000618606 ZNF12P17014 697 aa3.23□□□□□ -1.89
TARDBP-220ENST00000618606 CHRNB2P17787 502 aa3.23□□□□□ -1.89
TARDBP-220ENST00000618606 TNFSF8P32971 234 aa3.23□□□□□ -1.89
TARDBP-220ENST00000618606 STT3AP46977 705 aa3.23□□□□□ -1.89
TARDBP-220ENST00000618606 PMS2P54278 862 aa3.23□□□□□ -1.89
TARDBP-220ENST00000618606 POU3F1Q03052 451 aaPredicted RBP3.23□□□□□ -1.89
TARDBP-220ENST00000618606 POU5F1BQ06416 359 aa3.23□□□□□ -1.89
TARDBP-220ENST00000618606 FAM76BQ5HYJ3 339 aa3.23□□□□□ -1.89
TARDBP-220ENST00000618606 C8orf82Q6P1X6 216 aaPredicted RBP3.23□□□□□ -1.89
TARDBP-220ENST00000618606 Q6ZSV7 163 aa3.23□□□□□ -1.89
TARDBP-220ENST00000618606 ZNF367Q7RTV3 350 aa3.23□□□□□ -1.89
TARDBP-220ENST00000618606 FAM217AQ8IXS0 508 aa3.23□□□□□ -1.89
TARDBP-220ENST00000618606 CCDC33Q8N5R6 958 aa3.23□□□□□ -1.89
TARDBP-220ENST00000618606 BICD2Q8TD16 824 aa3.23□□□□□ -1.89
TARDBP-220ENST00000618606 JDP2Q8WYK2 163 aa3.23□□□□□ -1.89
TARDBP-220ENST00000618606 TTC17Q96AE7 1141 aa3.23□□□□□ -1.89
TARDBP-220ENST00000618606 MCRS1Q96EZ8 462 aa3.23□□□□□ -1.89
TARDBP-220ENST00000618606 C1QTNF4Q9BXJ3 329 aa3.23□□□□□ -1.89
TARDBP-220ENST00000618606 POLDIP3Q9BY77 421 aaKnown RBP3.23□□□□□ -1.89
TARDBP-220ENST00000618606 B3GNT4Q9C0J1 378 aa3.23□□□□□ -1.89
TARDBP-220ENST00000618606 OSBPL5Q9H0X9 879 aaPredicted RBP3.23□□□□□ -1.89
TARDBP-220ENST00000618606 CATSPERBQ9H7T0 1116 aa3.23□□□□□ -1.89
TARDBP-220ENST00000618606 DDX31Q9H8H2 851 aaKnown RBP3.23□□□□□ -1.89
TARDBP-220ENST00000618606 SLC4A4Q9Y6R1 1079 aa3.23□□□□□ -1.89
TARDBP-220ENST00000618606 MCIDASD6RGH6 385 aa3.22□□□□□ -1.89
TARDBP-220ENST00000618606 M0QYT0 321 aa3.22□□□□□ -1.89
TARDBP-220ENST00000618606 PPM1GO15355 546 aaPredicted RBP3.22□□□□□ -1.89
TARDBP-220ENST00000618606 SLC16A5O15375 505 aa3.22□□□□□ -1.89
TARDBP-220ENST00000618606 SOCS5O75159 536 aa3.22□□□□□ -1.89
TARDBP-220ENST00000618606 ALDOAP04075 364 aaKnown RBP3.22□□□□□ -1.89
TARDBP-220ENST00000618606 HMGB1P09429 215 aaKnown RBP3.22□□□□□ -1.89
TARDBP-220ENST00000618606 TCEA1P23193 301 aaKnown RBP3.22□□□□□ -1.89
TARDBP-220ENST00000618606 CHRNA5P30532 468 aa3.22□□□□□ -1.89
TARDBP-220ENST00000618606 PRIM2P49643 509 aa3.22□□□□□ -1.89
TARDBP-220ENST00000618606 RPL15P61313 204 aaKnown RBP3.22□□□□□ -1.89
TARDBP-220ENST00000618606 EEF1A2Q05639 463 aaKnown RBP3.22□□□□□ -1.89
TARDBP-220ENST00000618606 SF3B4Q15427 424 aaKnown RBP eCLIP3.22□□□□□ -1.895e-10■□□□□ 8.2
TARDBP-220ENST00000618606 ARL13BQ3SXY8 428 aa3.22□□□□□ -1.89
TARDBP-220ENST00000618606 FSCBQ5H9T9 825 aa3.22□□□□□ -1.89
TARDBP-220ENST00000618606 AAGABQ6PD74 315 aa3.22□□□□□ -1.89
TARDBP-220ENST00000618606 FAM185AQ8N0U4 392 aa3.22□□□□□ -1.89
TARDBP-220ENST00000618606 ZNF419Q96HQ0 510 aaPredicted RBP3.22□□□□□ -1.89
TARDBP-220ENST00000618606 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.22□□□□□ -1.892e-12■□□□□ 8.7
TARDBP-220ENST00000618606 FAM234BA2RU67 622 aa3.21□□□□□ -1.9
TARDBP-220ENST00000618606 MS4A18H0YCH9 400 aa3.21□□□□□ -1.9
TARDBP-220ENST00000618606 VWA5AO00534 786 aa3.21□□□□□ -1.9
TARDBP-220ENST00000618606 KIF3BO15066 747 aa3.21□□□□□ -1.9
TARDBP-220ENST00000618606 KRT36O76013 467 aa3.21□□□□□ -1.9
TARDBP-220ENST00000618606 CER1O95813 267 aa3.21□□□□□ -1.9
TARDBP-220ENST00000618606 UMODP07911 640 aa3.21□□□□□ -1.9
TARDBP-220ENST00000618606 GNLYP22749 145 aa3.21□□□□□ -1.9
TARDBP-220ENST00000618606 STAT1P42224 750 aa3.21□□□□□ -1.9
TARDBP-220ENST00000618606 DLX5P56178 289 aa3.21□□□□□ -1.9
TARDBP-220ENST00000618606 TAS2R50P59544 299 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms