RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 B4GALNT4Q76KP1 1039 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 OTOP3Q7RTS5 596 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 ZC3H18Q86VM9 953 aaKnown RBP8.28□□□□□ -1.08
TARDBP-219ENST00000617757 MFSD6LQ8IWD5 586 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 CCDC105Q8IYK2 499 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 CARNMT1Q8N4J0 409 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 CCDC33Q8N5R6 958 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 ST13P5Q8NFI4 369 aaPredicted RBP8.28□□□□□ -1.08
TARDBP-219ENST00000617757 ATL2Q8NHH9 583 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 LRRN4Q8WUT4 740 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 FGF14Q92915 247 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 IRF7Q92985 503 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 HLA-CQ95604 372 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 NKD2Q969F2 451 aaPredicted RBP8.28□□□□□ -1.08
TARDBP-219ENST00000617757 CELF6Q96J87 481 aaKnown RBP8.28□□□□□ -1.08
TARDBP-219ENST00000617757 RUNDC3BQ96NL0 473 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 FAM83CQ9BQN1 747 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 LRRC1Q9BTT6 524 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 SPHK2Q9NRA0 654 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 DUS2Q9NX74 493 aaKnown RBP8.28□□□□□ -1.08
TARDBP-219ENST00000617757 DONSONQ9NYP3 566 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 AMACRQ9UHK6 382 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 TBC1D30Q9Y2I9 924 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 WNT6Q9Y6F9 365 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 ANKRD36A6QL64 1941 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 EYSQ5T1H1 3165 aa8.28□□□□□ -1.08
TARDBP-219ENST00000617757 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.27□□□□□ -1.09
TARDBP-219ENST00000617757 ILVBLA1L0T0 632 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 BCLAF3A2AJT9 711 aaKnown RBP8.27□□□□□ -1.09
TARDBP-219ENST00000617757 HACD1B0YJ81 288 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 RASA4BC9J798 803 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 H0Y626 953 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 PPP1R12AO14974 1030 aaPredicted RBP8.27□□□□□ -1.09
TARDBP-219ENST00000617757 RASA4O43374 803 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 RAD51CO43502 376 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 RAMP2O60895 175 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 ECI2O75521 394 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 LUC7L3O95232 432 aaKnown RBP8.27□□□□□ -1.09
TARDBP-219ENST00000617757 PENKP01210 267 aaPredicted RBP8.27□□□□□ -1.09
TARDBP-219ENST00000617757 CYBBP04839 570 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 VAV1P15498 845 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 PSMC3P17980 439 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 MX2P20592 715 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 HOXD9P28356 352 aaPredicted RBP8.27□□□□□ -1.09
TARDBP-219ENST00000617757 RBL1P28749 1068 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 GARSP41250 739 aaKnown RBP8.27□□□□□ -1.09
TARDBP-219ENST00000617757 NDST2P52849 883 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 YBEYP58557 167 aaPredicted RBP8.27□□□□□ -1.09
TARDBP-219ENST00000617757 MRPS25P82663 173 aaKnown RBP8.27□□□□□ -1.09
TARDBP-219ENST00000617757 LMNB2Q03252 620 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 FCHO2Q0JRZ9 810 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 ZNF177Q13360 481 aaPredicted RBP8.27□□□□□ -1.09
TARDBP-219ENST00000617757 DHX34Q14147 1143 aaKnown RBP8.27□□□□□ -1.09
TARDBP-219ENST00000617757 SMAD2Q15796 467 aaKnown RBP8.27□□□□□ -1.09
TARDBP-219ENST00000617757 LEXMQ3ZCV2 418 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 TEX35Q5T0J7 233 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 TRIM68Q6AZZ1 485 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 CXorf57Q6NSI4 855 aaKnown RBP8.27□□□□□ -1.09
TARDBP-219ENST00000617757 DARS2Q6PI48 645 aaKnown RBP8.27□□□□□ -1.09
TARDBP-219ENST00000617757 ARHGAP36Q6ZRI8 547 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 MTSS1LQ765P7 747 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 SETD3Q86TU7 594 aaPredicted RBP8.27□□□□□ -1.09
TARDBP-219ENST00000617757 TMEM25Q86YD3 366 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 ALLCQ8N6M5 410 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 OR52K2Q8NGK3 314 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 CCDC26Q8TAB7 109 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 WFDC5Q8TCV5 224 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 GRK7Q8WTQ7 553 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 TFB1MQ8WVM0 346 aaKnown RBP8.27□□□□□ -1.09
TARDBP-219ENST00000617757 SLCO2A1Q92959 643 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 HDAC11Q96DB2 347 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 ASIC4Q96FT7 647 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 ZFYVE19Q96K21 471 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 QKIQ96PU8 341 aaKnown RBP eCLIP8.27□□□□□ -1.09
TARDBP-219ENST00000617757 LGMNQ99538 433 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 KXD1Q9BQD3 176 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 TMEM121Q9BTD3 319 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 RPP25Q9BUL9 199 aaKnown RBP8.27□□□□□ -1.09
TARDBP-219ENST00000617757 BRD8Q9H0E9 1235 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 MAGEH1Q9H213 219 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 C10orf88Q9H8K7 445 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 USP29Q9HBJ7 922 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 THG1LQ9NWX6 298 aaKnown RBP8.27□□□□□ -1.09
TARDBP-219ENST00000617757 PLK2Q9NYY3 685 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 MARK1Q9P0L2 795 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 FEZ2Q9UHY8 353 aaPredicted RBP8.27□□□□□ -1.09
TARDBP-219ENST00000617757 CLEC4EQ9ULY5 219 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 ZNF148Q9UQR1 794 aa8.27□□□□□ -1.09
TARDBP-219ENST00000617757 MYO18AQ92614 2054 aaKnown RBP8.26□□□□□ -1.09
TARDBP-219ENST00000617757 CFAP69A5D8W1 941 aa8.26□□□□□ -1.09
TARDBP-219ENST00000617757 ARHGAP42A6NI28 874 aa8.26□□□□□ -1.09
TARDBP-219ENST00000617757 C2CD4DB7Z1M9 353 aa8.26□□□□□ -1.09
TARDBP-219ENST00000617757 ANHXE9PGG2 379 aa8.26□□□□□ -1.09
TARDBP-219ENST00000617757 NEDD8-MDP1E9PL57 170 aa8.26□□□□□ -1.09
TARDBP-219ENST00000617757 DFFAO00273 331 aa8.26□□□□□ -1.09
TARDBP-219ENST00000617757 CHADO15335 359 aa8.26□□□□□ -1.09
TARDBP-219ENST00000617757 TTI1O43156 1089 aa8.26□□□□□ -1.09
TARDBP-219ENST00000617757 MAFKO60675 156 aa8.26□□□□□ -1.09
TARDBP-219ENST00000617757 NFATC1O95644 943 aa8.26□□□□□ -1.09
TARDBP-219ENST00000617757 CYP17A1P05093 508 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms