RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 PRPF38BQ5VTL8 546 aaKnown RBP16.72■□□□□ 0.27
SNAP47-213ENST00000617596 ZYG11BQ9C0D3 744 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 S1PR5Q9H228 398 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 ADAM7Q9H2U9 754 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 ZFP37Q9Y6Q3 630 aaPredicted RBP16.72■□□□□ 0.27
SNAP47-213ENST00000617596 GOLGA6BA6NDN3 693 aa16.71■□□□□ 0.27
SNAP47-213ENST00000617596 H7C0C1 242 aa16.71■□□□□ 0.27
SNAP47-213ENST00000617596 MCF2LO15068 1137 aa16.71■□□□□ 0.27
SNAP47-213ENST00000617596 ETS1P14921 441 aa16.71■□□□□ 0.27
SNAP47-213ENST00000617596 ZFXP17010 805 aaPredicted RBP16.71■□□□□ 0.27
SNAP47-213ENST00000617596 VIPR2P41587 438 aa16.71■□□□□ 0.27
SNAP47-213ENST00000617596 PTGIRP43119 386 aa16.71■□□□□ 0.27
SNAP47-213ENST00000617596 ATP5OP48047 213 aa16.71■□□□□ 0.27
SNAP47-213ENST00000617596 LIG3P49916 1009 aa16.71■□□□□ 0.27
SNAP47-213ENST00000617596 GDF10P55107 478 aa16.71■□□□□ 0.27
SNAP47-213ENST00000617596 PAFAH1B3Q15102 231 aaKnown RBP16.71■□□□□ 0.27
SNAP47-213ENST00000617596 TRADDQ15628 312 aa16.71■□□□□ 0.27
SNAP47-213ENST00000617596 OASLQ15646 514 aaKnown RBP16.71■□□□□ 0.27
SNAP47-213ENST00000617596 CCDC85BQ15834 202 aaPredicted RBP16.71■□□□□ 0.27
SNAP47-213ENST00000617596 ALS2CLQ60I27 953 aa16.71■□□□□ 0.27
SNAP47-213ENST00000617596 GLIS1Q8NBF1 620 aa16.71■□□□□ 0.27
SNAP47-213ENST00000617596 TTC13Q8NBP0 860 aa16.71■□□□□ 0.27
SNAP47-213ENST00000617596 AENQ8WTP8 325 aaKnown RBP16.71■□□□□ 0.27
SNAP47-213ENST00000617596 DEPDC1BQ8WUY9 529 aa16.71■□□□□ 0.27
SNAP47-213ENST00000617596 LRRC3BQ96PB8 259 aa16.71■□□□□ 0.27
SNAP47-213ENST00000617596 LGMNQ99538 433 aa16.71■□□□□ 0.27
SNAP47-213ENST00000617596 KLC2Q9H0B6 622 aa16.71■□□□□ 0.27
SNAP47-213ENST00000617596 LSM7Q9UK45 103 aaKnown RBP16.71■□□□□ 0.27
SNAP47-213ENST00000617596 SUFUQ9UMX1 484 aa16.71■□□□□ 0.27
SNAP47-213ENST00000617596 IGLV3-10A0A075B6K4 115 aa16.7■□□□□ 0.26
SNAP47-213ENST00000617596 ESYT3A0FGR9 886 aa16.7■□□□□ 0.26
SNAP47-213ENST00000617596 HTR3DQ70Z44 454 aa16.7■□□□□ 0.26
SNAP47-213ENST00000617596 NLRP14Q86W24 1093 aa16.7■□□□□ 0.26
SNAP47-213ENST00000617596 RTL3Q8N8U3 475 aaKnown RBP16.7■□□□□ 0.26
SNAP47-213ENST00000617596 BCAS4Q8TDM0 211 aa16.7■□□□□ 0.26
SNAP47-213ENST00000617596 RSPRY1Q96DX4 576 aa16.7■□□□□ 0.26
SNAP47-213ENST00000617596 TRIM31Q9BZY9 425 aa16.7■□□□□ 0.26
SNAP47-213ENST00000617596 CATSPERBQ9H7T0 1116 aa16.7■□□□□ 0.26
SNAP47-213ENST00000617596 HOMER3Q9NSC5 361 aa16.7■□□□□ 0.26
SNAP47-213ENST00000617596 PCYOX1Q9UHG3 505 aa16.7■□□□□ 0.26
SNAP47-213ENST00000617596 CLUHO75153 1309 aa16.7■□□□□ 0.26
SNAP47-213ENST00000617596 DRGXA6NNA5 263 aa16.7■□□□□ 0.26
SNAP47-213ENST00000617596 FGF10O15520 208 aaPredicted RBP16.7■□□□□ 0.26
SNAP47-213ENST00000617596 ZSCAN5DPP0CG00 497 aa16.7■□□□□ 0.26
SNAP47-213ENST00000617596 HOXB8P17481 243 aaPredicted RBP16.7■□□□□ 0.26
SNAP47-213ENST00000617596 PFKLP17858 780 aa16.7■□□□□ 0.26
SNAP47-213ENST00000617596 TNFRSF8P28908 595 aa16.7■□□□□ 0.26
SNAP47-213ENST00000617596 ZNF135P52742 658 aaPredicted RBP16.7■□□□□ 0.26
SNAP47-213ENST00000617596 FAM78AQ5JUQ0 283 aa16.7■□□□□ 0.26
SNAP47-213ENST00000617596 DARS2Q6PI48 645 aaKnown RBP16.7■□□□□ 0.26
SNAP47-213ENST00000617596 TPGS1Q6ZTW0 290 aa16.7■□□□□ 0.26
SNAP47-213ENST00000617596 GSTA5Q7RTV2 222 aa16.7■□□□□ 0.26
SNAP47-213ENST00000617596 JAMLQ86YT9 394 aa16.7■□□□□ 0.26
SNAP47-213ENST00000617596 FAM71DQ8N9W8 422 aa16.7■□□□□ 0.26
SNAP47-213ENST00000617596 ATL2Q8NHH9 583 aa16.7■□□□□ 0.26
SNAP47-213ENST00000617596 MYLIPQ8WY64 445 aa16.7■□□□□ 0.26
SNAP47-213ENST00000617596 NKD2Q969F2 451 aaPredicted RBP16.7■□□□□ 0.26
SNAP47-213ENST00000617596 AZIN2Q96A70 460 aa16.7■□□□□ 0.26
SNAP47-213ENST00000617596 GAS2L1Q99501 681 aaPredicted RBP16.7■□□□□ 0.26
SNAP47-213ENST00000617596 PPARGC1AQ9UBK2 798 aaKnown RBP16.7■□□□□ 0.26
SNAP47-213ENST00000617596 STOML2Q9UJZ1 356 aa16.7■□□□□ 0.26
SNAP47-213ENST00000617596 H3BQ06 376 aaPredicted RBP16.69■□□□□ 0.26
SNAP47-213ENST00000617596 SGK1O00141 431 aa16.69■□□□□ 0.26
SNAP47-213ENST00000617596 DFFAO00273 331 aa16.69■□□□□ 0.26
SNAP47-213ENST00000617596 KIAA0754O94854 1291 aa16.69■□□□□ 0.26
SNAP47-213ENST00000617596 ECEL1O95672 775 aa16.69■□□□□ 0.26
SNAP47-213ENST00000617596 IFNB1P01574 187 aa16.69■□□□□ 0.26
SNAP47-213ENST00000617596 RBL1P28749 1068 aa16.69■□□□□ 0.26
SNAP47-213ENST00000617596 VPS41P49754 854 aa16.69■□□□□ 0.26
SNAP47-213ENST00000617596 SATB1Q01826 763 aa16.69■□□□□ 0.26
SNAP47-213ENST00000617596 ATAT1Q5SQI0 421 aa16.69■□□□□ 0.26
SNAP47-213ENST00000617596 CES5AQ6NT32 575 aa16.69■□□□□ 0.26
SNAP47-213ENST00000617596 ARHGAP36Q6ZRI8 547 aa16.69■□□□□ 0.26
SNAP47-213ENST00000617596 CCNYQ8ND76 341 aa16.69■□□□□ 0.26
SNAP47-213ENST00000617596 CCDC26Q8TAB7 109 aa16.69■□□□□ 0.26
SNAP47-213ENST00000617596 MAGEC3Q8TD91 643 aa16.69■□□□□ 0.26
SNAP47-213ENST00000617596 OLFM3Q96PB7 478 aa16.69■□□□□ 0.26
SNAP47-213ENST00000617596 LINC00597Q9H2U6 94 aa16.69■□□□□ 0.26
SNAP47-213ENST00000617596 PLK2Q9NYY3 685 aa16.69■□□□□ 0.26
SNAP47-213ENST00000617596 HEXIM1O94992 359 aaKnown RBP16.68■□□□□ 0.26
SNAP47-213ENST00000617596 RHOQP17081 205 aa16.68■□□□□ 0.26
SNAP47-213ENST00000617596 POU3F3P20264 500 aaPredicted RBP16.68■□□□□ 0.26
SNAP47-213ENST00000617596 SP100P23497 879 aaPredicted RBP16.68■□□□□ 0.26
SNAP47-213ENST00000617596 NR2C2P49116 596 aa16.68■□□□□ 0.26
SNAP47-213ENST00000617596 GUCY2DQ02846 1103 aa16.68■□□□□ 0.26
SNAP47-213ENST00000617596 DRICH1Q6PGQ1 229 aaPredicted RBP16.68■□□□□ 0.26
SNAP47-213ENST00000617596 MAATS1Q7Z4T9 603 aa16.68■□□□□ 0.26
SNAP47-213ENST00000617596 ARHGAP12Q8IWW6 846 aa16.68■□□□□ 0.26
SNAP47-213ENST00000617596 TAB3Q8N5C8 712 aaPredicted RBP16.68■□□□□ 0.26
SNAP47-213ENST00000617596 OR52K2Q8NGK3 314 aa16.68■□□□□ 0.26
SNAP47-213ENST00000617596 SLC39A8Q9C0K1 460 aa16.68■□□□□ 0.26
SNAP47-213ENST00000617596 NOL6Q9H6R4 1146 aaKnown RBP16.68■□□□□ 0.26
SNAP47-213ENST00000617596 ZNF212Q9UDV6 495 aa16.68■□□□□ 0.26
SNAP47-213ENST00000617596 WNT6Q9Y6F9 365 aa16.68■□□□□ 0.26
SNAP47-213ENST00000617596 BRWD1Q9NSI6 2320 aa16.68■□□□□ 0.26
SNAP47-213ENST00000617596 OR1E1P30953 314 aa16.68■□□□□ 0.26
SNAP47-213ENST00000617596 HTR7P34969 479 aa16.68■□□□□ 0.26
SNAP47-213ENST00000617596 AP1B1Q10567 949 aa16.68■□□□□ 0.26
SNAP47-213ENST00000617596 MTA1Q13330 715 aa16.68■□□□□ 0.26
SNAP47-213ENST00000617596 PPP1R7Q15435 360 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms