RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 BEND5Q7L4P6 421 aa15.38■□□□□ 0.05
UBXN1-218ENST00000616865 EMC1Q8N766 993 aa15.38■□□□□ 0.05
UBXN1-218ENST00000616865 ZNF564Q8TBZ8 553 aaPredicted RBP15.38■□□□□ 0.05
UBXN1-218ENST00000616865 RFFLQ8WZ73 363 aa15.38■□□□□ 0.05
UBXN1-218ENST00000616865 SLC2A13Q96QE2 648 aa15.38■□□□□ 0.05
UBXN1-218ENST00000616865 KLF16Q9BXK1 252 aaPredicted RBP15.38■□□□□ 0.05
UBXN1-218ENST00000616865 TSGA10Q9BZW7 698 aa15.38■□□□□ 0.05
UBXN1-218ENST00000616865 FAM204AQ9H8W3 233 aa15.38■□□□□ 0.05
UBXN1-218ENST00000616865 OSER1Q9NX31 292 aa15.38■□□□□ 0.05
UBXN1-218ENST00000616865 RRN3Q9NYV6 651 aa15.38■□□□□ 0.05
UBXN1-218ENST00000616865 RASAL2Q9UJF2 1139 aa15.38■□□□□ 0.05
UBXN1-218ENST00000616865 DNMT3LQ9UJW3 386 aa15.38■□□□□ 0.05
UBXN1-218ENST00000616865 LSM7Q9UK45 103 aaKnown RBP15.38■□□□□ 0.05
UBXN1-218ENST00000616865 NUDT5Q9UKK9 219 aa15.38■□□□□ 0.05
UBXN1-218ENST00000616865 NAALADL1Q9UQQ1 740 aa15.38■□□□□ 0.05
UBXN1-218ENST00000616865 PCNX2A6NKB5 2137 aa15.37■□□□□ 0.05
UBXN1-218ENST00000616865 ARHGAP33O14559 1287 aa15.37■□□□□ 0.05
UBXN1-218ENST00000616865 ZBTB24O43167 697 aaPredicted RBP15.37■□□□□ 0.05
UBXN1-218ENST00000616865 ZSCAN12O43309 604 aa15.37■□□□□ 0.05
UBXN1-218ENST00000616865 TBX18O95935 607 aa15.37■□□□□ 0.05
UBXN1-218ENST00000616865 SYPP08247 313 aa15.37■□□□□ 0.05
UBXN1-218ENST00000616865 RFC1P35251 1148 aaPredicted RBP15.37■□□□□ 0.05
UBXN1-218ENST00000616865 SULT1E1P49888 294 aa15.37■□□□□ 0.05
UBXN1-218ENST00000616865 FAM193AP78312 1265 aa15.37■□□□□ 0.05
UBXN1-218ENST00000616865 TPGS1Q6ZTW0 290 aa15.37■□□□□ 0.05
UBXN1-218ENST00000616865 SND1Q7KZF4 910 aaKnown RBP eCLIP15.37■□□□□ 0.05
UBXN1-218ENST00000616865 OR2I1PQ8NGU4 316 aa15.37■□□□□ 0.05
UBXN1-218ENST00000616865 JOSD2Q8TAC2 188 aa15.37■□□□□ 0.05
UBXN1-218ENST00000616865 RXFP2Q8WXD0 754 aa15.37■□□□□ 0.05
UBXN1-218ENST00000616865 ERLEC1Q96DZ1 483 aa15.37■□□□□ 0.05
UBXN1-218ENST00000616865 CD93Q9NPY3 652 aa15.37■□□□□ 0.05
UBXN1-218ENST00000616865 DNAAF2Q9NVR5 837 aaKnown RBP15.37■□□□□ 0.05
UBXN1-218ENST00000616865 MARCH2Q9P0N8 246 aa15.37■□□□□ 0.05
UBXN1-218ENST00000616865 ANAPC7Q9UJX3 599 aa15.37■□□□□ 0.05
UBXN1-218ENST00000616865 TMEM59LQ9UK28 342 aa15.37■□□□□ 0.05
UBXN1-218ENST00000616865 REXO2Q9Y3B8 237 aaKnown RBP15.37■□□□□ 0.05
UBXN1-218ENST00000616865 RAD54BQ9Y620 910 aa15.37■□□□□ 0.05
UBXN1-218ENST00000616865 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.37■□□□□ 0.05
UBXN1-218ENST00000616865 FREM2Q5SZK8 3169 aa15.36■□□□□ 0.05
UBXN1-218ENST00000616865 SYNJ2BP-COX16A0A087WUM0 186 aa15.36■□□□□ 0.05
UBXN1-218ENST00000616865 MYO1FO00160 1098 aa15.36■□□□□ 0.05
UBXN1-218ENST00000616865 KRT86O43790 486 aa15.36■□□□□ 0.05
UBXN1-218ENST00000616865 CD59P13987 128 aa15.36■□□□□ 0.05
UBXN1-218ENST00000616865 HOXB3P14651 431 aaPredicted RBP15.36■□□□□ 0.05
UBXN1-218ENST00000616865 PSMA2P25787 234 aa15.36■□□□□ 0.05
UBXN1-218ENST00000616865 RDXP35241 583 aaKnown RBP15.36■□□□□ 0.05
UBXN1-218ENST00000616865 FLT3P36888 993 aa15.36■□□□□ 0.05
UBXN1-218ENST00000616865 DGKGP49619 791 aa15.36■□□□□ 0.05
UBXN1-218ENST00000616865 RPL7AP62424 266 aaKnown RBP15.36■□□□□ 0.05
UBXN1-218ENST00000616865 HNRNPDQ14103 355 aaKnown RBP15.36■□□□□ 0.05
UBXN1-218ENST00000616865 IFI16Q16666 785 aaKnown RBP15.36■□□□□ 0.05
UBXN1-218ENST00000616865 SYPL2Q5VXT5 272 aa15.36■□□□□ 0.05
UBXN1-218ENST00000616865 ARCQ7LC44 396 aa15.36■□□□□ 0.05
UBXN1-218ENST00000616865 ZNF276Q8N554 614 aa15.36■□□□□ 0.05
UBXN1-218ENST00000616865 SLC35G2Q8TBE7 412 aa15.36■□□□□ 0.05
UBXN1-218ENST00000616865 RNF34Q969K3 372 aa15.36■□□□□ 0.05
UBXN1-218ENST00000616865 MRGPRX1Q96LB2 322 aa15.36■□□□□ 0.05
UBXN1-218ENST00000616865 SLC6A17Q9H1V8 727 aa15.36■□□□□ 0.05
UBXN1-218ENST00000616865 DDIT4Q9NX09 232 aa15.36■□□□□ 0.05
UBXN1-218ENST00000616865 CACNA2D2Q9NY47 1150 aa15.36■□□□□ 0.05
UBXN1-218ENST00000616865 COX16Q9P0S2 106 aa15.36■□□□□ 0.05
UBXN1-218ENST00000616865 IP6K2Q9UHH9 426 aa15.36■□□□□ 0.05
UBXN1-218ENST00000616865 LCMT1Q9UIC8 334 aa15.36■□□□□ 0.05
UBXN1-218ENST00000616865 TFR2Q9UP52 801 aa15.36■□□□□ 0.05
UBXN1-218ENST00000616865 PPP2R2CQ9Y2T4 447 aa15.36■□□□□ 0.05
UBXN1-218ENST00000616865 GON4LQ3T8J9 2241 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 DMXL2Q8TDJ6 3036 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 A0A0A6YYK5 440 aaPredicted RBP15.35■□□□□ 0.05
UBXN1-218ENST00000616865 TCRBV5S1A1TA0A578 114 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 SLC12A8A0AV02 714 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 FAM221BA6H8Z2 402 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 TMEM191CA6NGB0 347 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 C2CD4BA6NLJ0 364 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 TMEM110-MUSTN1A8MSY1 372 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 M0QYT0 321 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 GFRA2O00451 464 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 MDM4O15151 490 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 CCP110O43303 1012 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 GJB3O75712 270 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 RNF8O76064 485 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 HMBSP08397 361 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 ATP11AP98196 1134 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 DEUP1Q05D60 604 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 NME3Q13232 169 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 SLC14A1Q13336 389 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 CDO1Q16878 200 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 ZNF423Q2M1K9 1284 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 SLC25A52Q3SY17 297 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 PPP1R15BQ5SWA1 713 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 MSANTD2Q6P1R3 559 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 KLHDC10Q6PID8 442 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 Q6ZNB5 142 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 RGL4Q8IZJ4 473 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 ADAM32Q8TC27 787 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 DQX1Q8TE96 717 aaKnown RBP15.35■□□□□ 0.05
UBXN1-218ENST00000616865 ZNF419Q96HQ0 510 aaPredicted RBP15.35■□□□□ 0.05
UBXN1-218ENST00000616865 CALR3Q96L12 384 aaKnown RBP15.35■□□□□ 0.05
UBXN1-218ENST00000616865 CFAP57Q96MR6 1250 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 SERPINB11Q96P15 392 aa15.35■□□□□ 0.05
UBXN1-218ENST00000616865 CNPY3Q9BT09 278 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms