RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 BNIP3Q12983 259 aa18.27■□□□□ 0.52
TRAPPC3-209ENST00000616395 TTC31Q49AM3 519 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC3-209ENST00000616395 PRICKLE2Q7Z3G6 844 aa18.27■□□□□ 0.52
TRAPPC3-209ENST00000616395 SCD5Q86SK9 330 aa18.27■□□□□ 0.52
TRAPPC3-209ENST00000616395 TXLNBQ8N3L3 684 aa18.27■□□□□ 0.52
TRAPPC3-209ENST00000616395 TC2NQ8N9U0 490 aa18.27■□□□□ 0.52
TRAPPC3-209ENST00000616395 DDI1Q8WTU0 396 aa18.27■□□□□ 0.52
TRAPPC3-209ENST00000616395 ZNF578Q96N58 590 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC3-209ENST00000616395 GDF3Q9NR23 364 aa18.27■□□□□ 0.52
TRAPPC3-209ENST00000616395 AASDHPPTQ9NRN7 309 aa18.27■□□□□ 0.52
TRAPPC3-209ENST00000616395 FAM49BQ9NUQ9 324 aa18.27■□□□□ 0.52
TRAPPC3-209ENST00000616395 ADAMTS1Q9UHI8 967 aa18.27■□□□□ 0.52
TRAPPC3-209ENST00000616395 NAGPAQ9UK23 515 aa18.27■□□□□ 0.52
TRAPPC3-209ENST00000616395 PLA2G4CQ9UP65 541 aa18.27■□□□□ 0.52
TRAPPC3-209ENST00000616395 PCDHB1Q9Y5F3 818 aa18.27■□□□□ 0.52
TRAPPC3-209ENST00000616395 TP53BP1Q12888 1972 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC3-209ENST00000616395 KIF2AO00139 706 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC3-209ENST00000616395 P4HA2O15460 535 aa18.26■□□□□ 0.51
TRAPPC3-209ENST00000616395 GYPCP04921 128 aa18.26■□□□□ 0.51
TRAPPC3-209ENST00000616395 CD38P28907 300 aa18.26■□□□□ 0.51
TRAPPC3-209ENST00000616395 CLCN1P35523 988 aa18.26■□□□□ 0.51
TRAPPC3-209ENST00000616395 GCLMP48507 274 aa18.26■□□□□ 0.51
TRAPPC3-209ENST00000616395 ARRB1P49407 418 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC3-209ENST00000616395 VAMP7P51809 220 aa18.26■□□□□ 0.51
TRAPPC3-209ENST00000616395 CLDN10P78369 228 aa18.26■□□□□ 0.51
TRAPPC3-209ENST00000616395 CCZ1BP86790 482 aa18.26■□□□□ 0.51
TRAPPC3-209ENST00000616395 CCZ1P86791 482 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC3-209ENST00000616395 NCOA4Q13772 614 aa18.26■□□□□ 0.51
TRAPPC3-209ENST00000616395 EXOC3L4Q17RC7 722 aa18.26■□□□□ 0.51
TRAPPC3-209ENST00000616395 ZNF699Q32M78 642 aa18.26■□□□□ 0.51
TRAPPC3-209ENST00000616395 SFMBT2Q5VUG0 894 aa18.26■□□□□ 0.51
TRAPPC3-209ENST00000616395 DENND1CQ8IV53 801 aa18.26■□□□□ 0.51
TRAPPC3-209ENST00000616395 C12orf29Q8N999 325 aa18.26■□□□□ 0.51
TRAPPC3-209ENST00000616395 DCLK3Q9C098 648 aa18.26■□□□□ 0.51
TRAPPC3-209ENST00000616395 FBRSQ9HAH7 460 aa18.26■□□□□ 0.51
TRAPPC3-209ENST00000616395 ABHD10Q9NUJ1 306 aa18.26■□□□□ 0.51
TRAPPC3-209ENST00000616395 HMGXB4Q9UGU5 601 aa18.26■□□□□ 0.51
TRAPPC3-209ENST00000616395 RASAL2Q9UJF2 1139 aa18.26■□□□□ 0.51
TRAPPC3-209ENST00000616395 COL12A1Q99715 3063 aa18.26■□□□□ 0.51
TRAPPC3-209ENST00000616395 A0A1W2PR77 199 aa18.25■□□□□ 0.51
TRAPPC3-209ENST00000616395 KLK10O43240 276 aa18.25■□□□□ 0.51
TRAPPC3-209ENST00000616395 MT-CO3P00414 261 aa18.25■□□□□ 0.51
TRAPPC3-209ENST00000616395 MPOP05164 745 aa18.25■□□□□ 0.51
TRAPPC3-209ENST00000616395 FAM200BP0CF97 657 aa18.25■□□□□ 0.51
TRAPPC3-209ENST00000616395 ADORA2BP29275 332 aa18.25■□□□□ 0.51
TRAPPC3-209ENST00000616395 GALCP54803 685 aa18.25■□□□□ 0.51
TRAPPC3-209ENST00000616395 COG7P83436 770 aa18.25■□□□□ 0.51
TRAPPC3-209ENST00000616395 PPP3CAQ08209 521 aa18.25■□□□□ 0.51
TRAPPC3-209ENST00000616395 VAC14Q08AM6 782 aa18.25■□□□□ 0.51
TRAPPC3-209ENST00000616395 ZNF776Q68DI1 518 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC3-209ENST00000616395 SPOPLQ6IQ16 392 aa18.25■□□□□ 0.51
TRAPPC3-209ENST00000616395 NCEH1Q6PIU2 408 aa18.25■□□□□ 0.51
TRAPPC3-209ENST00000616395 TADA2BQ86TJ2 420 aa18.25■□□□□ 0.51
TRAPPC3-209ENST00000616395 CPXM2Q8N436 756 aa18.25■□□□□ 0.51
TRAPPC3-209ENST00000616395 TMC2Q8TDI7 906 aa18.25■□□□□ 0.51
TRAPPC3-209ENST00000616395 GANCQ8TET4 914 aa18.25■□□□□ 0.51
TRAPPC3-209ENST00000616395 KCNE4Q8WWG9 221 aa18.25■□□□□ 0.51
TRAPPC3-209ENST00000616395 VRTNQ9H8Y1 702 aa18.25■□□□□ 0.51
TRAPPC3-209ENST00000616395 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.25■□□□□ 0.51
TRAPPC3-209ENST00000616395 NCKAP1Q9Y2A7 1128 aa18.25■□□□□ 0.51
TRAPPC3-209ENST00000616395 PIEZO2Q9H5I5 2752 aa18.25■□□□□ 0.51
TRAPPC3-209ENST00000616395 CCDC172P0C7W6 258 aa18.24■□□□□ 0.51
TRAPPC3-209ENST00000616395 ACP1P24666 158 aa18.24■□□□□ 0.51
TRAPPC3-209ENST00000616395 HLA-FP30511 346 aa18.24■□□□□ 0.51
TRAPPC3-209ENST00000616395 CYLC1P35663 651 aaPredicted RBP18.24■□□□□ 0.51
TRAPPC3-209ENST00000616395 PIK3CAP42336 1068 aa18.24■□□□□ 0.51
TRAPPC3-209ENST00000616395 NXPH1P58417 271 aa18.24■□□□□ 0.51
TRAPPC3-209ENST00000616395 EFEMP1Q12805 493 aa18.24■□□□□ 0.51
TRAPPC3-209ENST00000616395 ARID5BQ14865 1188 aa18.24■□□□□ 0.51
TRAPPC3-209ENST00000616395 ZACNQ401N2 412 aa18.24■□□□□ 0.51
TRAPPC3-209ENST00000616395 ZNF667Q5HYK9 610 aa18.24■□□□□ 0.51
TRAPPC3-209ENST00000616395 CLEC20AQ6ZU45 233 aa18.24■□□□□ 0.51
TRAPPC3-209ENST00000616395 SV2AQ7L0J3 742 aa18.24■□□□□ 0.51
TRAPPC3-209ENST00000616395 KANSL1Q7Z3B3 1105 aa18.24■□□□□ 0.51
TRAPPC3-209ENST00000616395 CRYBG2Q8N1P7 616 aa18.24■□□□□ 0.51
TRAPPC3-209ENST00000616395 SNRNP27Q8WVK2 155 aaKnown RBP18.24■□□□□ 0.51
TRAPPC3-209ENST00000616395 GOLGA1Q92805 767 aa18.24■□□□□ 0.51
TRAPPC3-209ENST00000616395 TRIM4Q9C037 500 aa18.24■□□□□ 0.51
TRAPPC3-209ENST00000616395 PLCB1Q9NQ66 1216 aa18.24■□□□□ 0.51
TRAPPC3-209ENST00000616395 KCND1Q9NSA2 647 aa18.24■□□□□ 0.51
TRAPPC3-209ENST00000616395 SERGEFQ9UGK8 458 aa18.24■□□□□ 0.51
TRAPPC3-209ENST00000616395 IL17BQ9UHF5 180 aa18.24■□□□□ 0.51
TRAPPC3-209ENST00000616395 HLA-DRAP01903 254 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 RALAP11233 206 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 HOXD9P28356 352 aaPredicted RBP18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 GTF2H1P32780 548 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 NDST1P52848 882 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 PROX2Q3B8N5 592 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 USP30Q70CQ3 517 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 CHST9Q7L1S5 443 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 ADIPOR2Q86V24 386 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 ZNF276Q8N554 614 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 TAS1R2Q8TE23 839 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 DNAJC7Q99615 494 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 PABPC3Q9H361 631 aaKnown RBP18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 MTG2Q9H4K7 406 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 LUC7LQ9NQ29 371 aaKnown RBP18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 FAM207AQ9NSI2 230 aaPredicted RBP18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 FBXL12Q9NXK8 326 aa18.23■□□□□ 0.51
TRAPPC3-209ENST00000616395 PYCARDQ9ULZ3 195 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms