RNA–Protein interactions for RNA: ENST00000612688.1

PPP4R3B-204, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 2

Gene PPP4R3B, Length 2,981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-204ENST00000612688 PENKP01210 267 aaPredicted RBP12.06□□□□□ -0.48
PPP4R3B-204ENST00000612688 DLDP09622 509 aaKnown RBP12.06□□□□□ -0.48
PPP4R3B-204ENST00000612688 PABPC4LP0CB38 370 aaKnown RBP12.06□□□□□ -0.48
PPP4R3B-204ENST00000612688 KCNA4P22459 653 aa12.06□□□□□ -0.48
PPP4R3B-204ENST00000612688 RBL1P28749 1068 aa12.06□□□□□ -0.48
PPP4R3B-204ENST00000612688 HOXC8P31273 242 aa12.06□□□□□ -0.48
PPP4R3B-204ENST00000612688 NAA20P61599 178 aa12.06□□□□□ -0.48
PPP4R3B-204ENST00000612688 SLC25A11Q02978 314 aaKnown RBP12.06□□□□□ -0.48
PPP4R3B-204ENST00000612688 FOLH1Q04609 750 aa12.06□□□□□ -0.48
PPP4R3B-204ENST00000612688 OLIG2Q13516 323 aa12.06□□□□□ -0.48
PPP4R3B-204ENST00000612688 CYLC2Q14093 348 aaPredicted RBP12.06□□□□□ -0.48
PPP4R3B-204ENST00000612688 CASC4Q6P4E1 433 aa12.06□□□□□ -0.48
PPP4R3B-204ENST00000612688 B3GNT6Q6ZMB0 384 aa12.06□□□□□ -0.48
PPP4R3B-204ENST00000612688 RNF111Q6ZNA4 994 aa12.06□□□□□ -0.48
PPP4R3B-204ENST00000612688 DENND5BQ6ZUT9 1274 aa12.06□□□□□ -0.48
PPP4R3B-204ENST00000612688 ZNF554Q86TJ5 538 aa12.06□□□□□ -0.48
PPP4R3B-204ENST00000612688 RNF148Q8N7C7 305 aa12.06□□□□□ -0.48
PPP4R3B-204ENST00000612688 ZNF398Q8TD17 642 aa12.06□□□□□ -0.48
PPP4R3B-204ENST00000612688 MZB1Q8WU39 189 aa12.06□□□□□ -0.48
PPP4R3B-204ENST00000612688 CATSPER2Q96P56 530 aa12.06□□□□□ -0.48
PPP4R3B-204ENST00000612688 DCUN1D5Q9BTE7 237 aa12.06□□□□□ -0.48
PPP4R3B-204ENST00000612688 ARHGEF4Q9NR80 690 aa12.06□□□□□ -0.48
PPP4R3B-204ENST00000612688 MIOSQ9NXC5 875 aa12.06□□□□□ -0.48
PPP4R3B-204ENST00000612688 COX16Q9P0S2 106 aa12.06□□□□□ -0.48
PPP4R3B-204ENST00000612688 SHOC2Q9UQ13 582 aa12.06□□□□□ -0.48
PPP4R3B-204ENST00000612688 CCDC78A2IDD5 438 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 M0QYV0 167 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 PDLIM1O00151 329 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 VILLO15195 856 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 SPTLC1O15269 473 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 ITGAVP06756 1048 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 SLC18A1P54219 525 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 LPIN1Q14693 890 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 C16orf72Q14CZ0 275 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 ARHGEF6Q15052 776 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 KLHL35Q6PF15 583 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 ACAD11Q709F0 780 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 DHDDSQ86SQ9 333 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 TDRPQ86YL5 185 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 TMPRSS6Q8IU80 811 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 RELL1Q8IUW5 271 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 METTL25Q8N6Q8 603 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 ZFP28Q8NHY6 868 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 ARMC7Q9H6L4 198 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 SENP1Q9P0U3 644 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 SLC24A2Q9UI40 661 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 RBMX2Q9Y388 322 aaKnown RBP12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 MYO18AQ92614 2054 aaKnown RBP12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 CEP290O15078 2479 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 MCF2LO15068 1137 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 ACAT1P24752 427 aaKnown RBP12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 RPL10AP62906 217 aaKnown RBP12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 SFSWAPQ12872 951 aaKnown RBP12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 FBXO47Q5MNV8 452 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 GRAMD4Q6IC98 578 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 OR6B2Q6IFH4 312 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 KLC3Q6P597 504 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 ICA1LQ8NDH6 482 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 PPP1R14CQ8TAE6 165 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 CXorf38Q8TB03 319 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 TUBB6Q9BUF5 446 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 MFHAS1Q9Y4C4 1052 aa12.05□□□□□ -0.48
PPP4R3B-204ENST00000612688 A8MXQ7 604 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 GPR182O15218 404 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 PROCP04070 461 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 CALB1P05937 261 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 CSH1P0DML2 217 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 CSH2P0DML3 217 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 CKBP12277 381 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 UQCRBP14927 111 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 TFE3P19532 575 aaPredicted RBP12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 CHN2P52757 468 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 PPIDQ08752 370 aaKnown RBP12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 CA9Q16790 459 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 MYLK3Q32MK0 819 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 C9orf57Q5W0N0 161 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 PPP1R2P3Q6NXS1 205 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 AMIGO2Q86SJ2 522 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 PDSS2Q86YH6 399 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 HPS6Q86YV9 775 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 NDUFAF2Q8N183 169 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 DPEP3Q9H4B8 488 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 ZC3H7BQ9UGR2 993 aaKnown RBP12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 ITGA11Q9UKX5 1188 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 USP18Q9UMW8 372 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 PTGESO14684 152 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 ITM2AO43736 263 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 ALOX15P16050 662 aaPredicted RBP12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 LMO2P25791 158 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 CRABP2P29373 138 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 AXLP30530 894 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 RABGGTBP53611 331 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 CCL23P55773 120 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 ACTR3P61158 418 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 TRNP1Q6NT89 227 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 NUDCD3Q8IVD9 361 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 STKLD1Q8NE28 680 aa12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 NKD2Q969F2 451 aaPredicted RBP12.04□□□□□ -0.48
PPP4R3B-204ENST00000612688 DGCR14Q96DF8 476 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms