RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 MAT2AP31153 395 aaKnown RBP24.22■■□□□ 1.47
MMP28-203ENST00000612672 ARRB1P49407 418 aaPredicted RBP24.22■■□□□ 1.47
MMP28-203ENST00000612672 ECT2LQ008S8 904 aa24.22■■□□□ 1.47
MMP28-203ENST00000612672 CCDC173Q0VFZ6 552 aa24.22■■□□□ 1.47
MMP28-203ENST00000612672 NAPEPLDQ6IQ20 393 aa24.22■■□□□ 1.47
MMP28-203ENST00000612672 TMEM270Q6UE05 265 aa24.22■■□□□ 1.47
MMP28-203ENST00000612672 CIR1Q86X95 450 aaPredicted RBP24.22■■□□□ 1.47
MMP28-203ENST00000612672 ZNF557Q8N988 423 aaPredicted RBP24.22■■□□□ 1.47
MMP28-203ENST00000612672 SLC35C1Q96A29 364 aa24.22■■□□□ 1.47
MMP28-203ENST00000612672 CCDC47Q96A33 483 aaKnown RBP24.22■■□□□ 1.47
MMP28-203ENST00000612672 ERVMER34-1Q9H9K5 563 aa24.22■■□□□ 1.47
MMP28-203ENST00000612672 PCDHB1Q9Y5F3 818 aa24.22■■□□□ 1.47
MMP28-203ENST00000612672 TRIM38O00635 465 aa24.21■■□□□ 1.47
MMP28-203ENST00000612672 ADH1BP00325 375 aa24.21■■□□□ 1.47
MMP28-203ENST00000612672 IL1BP01584 269 aa24.21■■□□□ 1.47
MMP28-203ENST00000612672 CDK4P11802 303 aa24.21■■□□□ 1.47
MMP28-203ENST00000612672 CKMT2P17540 419 aa24.21■■□□□ 1.47
MMP28-203ENST00000612672 C5AR1P21730 350 aa24.21■■□□□ 1.47
MMP28-203ENST00000612672 PITX1P78337 314 aaPredicted RBP24.21■■□□□ 1.47
MMP28-203ENST00000612672 SYPL2Q5VXT5 272 aa24.21■■□□□ 1.47
MMP28-203ENST00000612672 RAP1GAP2Q684P5 730 aa24.21■■□□□ 1.47
MMP28-203ENST00000612672 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP24.21■■□□□ 1.47
MMP28-203ENST00000612672 SPACA3Q8IXA5 215 aa24.21■■□□□ 1.47
MMP28-203ENST00000612672 LGI2Q8N0V4 545 aa24.21■■□□□ 1.47
MMP28-203ENST00000612672 DCBLD1Q8N8Z6 715 aa24.21■■□□□ 1.47
MMP28-203ENST00000612672 FRS2Q8WU20 508 aa24.21■■□□□ 1.47
MMP28-203ENST00000612672 CYTH4Q9UIA0 394 aa24.21■■□□□ 1.47
MMP28-203ENST00000612672 TLR6Q9Y2C9 796 aa24.21■■□□□ 1.47
MMP28-203ENST00000612672 ZDHHC9Q9Y397 364 aa24.21■■□□□ 1.47
MMP28-203ENST00000612672 TBC1D3DA0A087WVF3 549 aa24.2■■□□□ 1.46
MMP28-203ENST00000612672 TBC1D3IA0A087WXS9 549 aa24.2■■□□□ 1.46
MMP28-203ENST00000612672 TBC1D3EA0A087X179 549 aa24.2■■□□□ 1.46
MMP28-203ENST00000612672 TBC1D3KA0A087X1G2 549 aa24.2■■□□□ 1.46
MMP28-203ENST00000612672 TBC1D3FA6NER0 549 aaPredicted RBP24.2■■□□□ 1.46
MMP28-203ENST00000612672 TBC1D3LB9A6J9 549 aa24.2■■□□□ 1.46
MMP28-203ENST00000612672 RRP8O43159 456 aaKnown RBP24.2■■□□□ 1.46
MMP28-203ENST00000612672 TBC1D3HP0C7X1 549 aa24.2■■□□□ 1.46
MMP28-203ENST00000612672 GLDCP23378 1020 aa24.2■■□□□ 1.46
MMP28-203ENST00000612672 TBC1D3GQ6DHY5 549 aa24.2■■□□□ 1.46
MMP28-203ENST00000612672 TBC1D3CQ6IPX1 549 aa24.2■■□□□ 1.46
MMP28-203ENST00000612672 TBC1D3Q8IZP1 549 aaPredicted RBP24.2■■□□□ 1.46
MMP28-203ENST00000612672 MFSD2AQ8NA29 543 aa24.2■■□□□ 1.46
MMP28-203ENST00000612672 FGF11Q92914 225 aa24.2■■□□□ 1.46
MMP28-203ENST00000612672 SPATA32Q96LK8 384 aa24.2■■□□□ 1.46
MMP28-203ENST00000612672 CLCA2Q9UQC9 943 aa24.2■■□□□ 1.46
MMP28-203ENST00000612672 COL6A6A6NMZ7 2263 aa24.2■■□□□ 1.46
MMP28-203ENST00000612672 TRIM49BA6NDI0 452 aa24.19■■□□□ 1.46
MMP28-203ENST00000612672 CYSRT1A8MQ03 144 aa24.19■■□□□ 1.46
MMP28-203ENST00000612672 SIGLEC6O43699 453 aa24.19■■□□□ 1.46
MMP28-203ENST00000612672 PAEPP09466 180 aa24.19■■□□□ 1.46
MMP28-203ENST00000612672 TACR2P21452 398 aa24.19■■□□□ 1.46
MMP28-203ENST00000612672 ACP1P24666 158 aa24.19■■□□□ 1.46
MMP28-203ENST00000612672 PRCPP42785 496 aa24.19■■□□□ 1.46
MMP28-203ENST00000612672 YWHAEP62258 255 aaKnown RBP24.19■■□□□ 1.46
MMP28-203ENST00000612672 SFSWAPQ12872 951 aaKnown RBP24.19■■□□□ 1.46
MMP28-203ENST00000612672 ILKQ13418 452 aa24.19■■□□□ 1.46
MMP28-203ENST00000612672 CNGA2Q16280 664 aa24.19■■□□□ 1.46
MMP28-203ENST00000612672 TBC1D25Q3MII6 688 aa24.19■■□□□ 1.46
MMP28-203ENST00000612672 POM121L1PQ3SYA9 428 aa24.19■■□□□ 1.46
MMP28-203ENST00000612672 SLC25A45Q8N413 288 aa24.19■■□□□ 1.46
MMP28-203ENST00000612672 BAP1Q92560 729 aa24.19■■□□□ 1.46
MMP28-203ENST00000612672 SERPINB11Q96P15 392 aa24.19■■□□□ 1.46
MMP28-203ENST00000612672 KIAA1257Q9ULG3 409 aa24.19■■□□□ 1.46
MMP28-203ENST00000612672 CEP83Q9Y592 693 aa24.19■■□□□ 1.46
MMP28-203ENST00000612672 PCDHB4Q9Y5E5 795 aa24.19■■□□□ 1.46
MMP28-203ENST00000612672 TYW5A2RUC4 315 aaKnown RBP24.18■■□□□ 1.46
MMP28-203ENST00000612672 SLC16A3O15427 465 aaKnown RBP24.18■■□□□ 1.46
MMP28-203ENST00000612672 PLRG1O43660 514 aaKnown RBP24.18■■□□□ 1.46
MMP28-203ENST00000612672 PDGFRAP16234 1089 aa24.18■■□□□ 1.46
MMP28-203ENST00000612672 CXADRP78310 365 aa24.18■■□□□ 1.46
MMP28-203ENST00000612672 NNTQ13423 1086 aa24.18■■□□□ 1.46
MMP28-203ENST00000612672 ELAVL3Q14576 367 aaKnown RBP24.18■■□□□ 1.46
MMP28-203ENST00000612672 ZC3H12AQ5D1E8 599 aaKnown RBP24.18■■□□□ 1.46
MMP28-203ENST00000612672 AGBL4Q5VU57 503 aa24.18■■□□□ 1.46
MMP28-203ENST00000612672 ANKRD40Q6AI12 368 aa24.18■■□□□ 1.46
MMP28-203ENST00000612672 KDM7AQ6ZMT4 941 aa24.18■■□□□ 1.46
MMP28-203ENST00000612672 GPR155Q7Z3F1 870 aa24.18■■□□□ 1.46
MMP28-203ENST00000612672 HSFY1Q96LI6 401 aa24.18■■□□□ 1.46
MMP28-203ENST00000612672 DDX50Q9BQ39 737 aaKnown RBP24.18■■□□□ 1.46
MMP28-203ENST00000612672 UCKL1Q9NWZ5 548 aa24.18■■□□□ 1.46
MMP28-203ENST00000612672 RPL34P49207 117 aaKnown RBP24.17■■□□□ 1.46
MMP28-203ENST00000612672 IRAK1P51617 712 aa24.17■■□□□ 1.46
MMP28-203ENST00000612672 CNTN1Q12860 1018 aa24.17■■□□□ 1.46
MMP28-203ENST00000612672 PNOCQ13519 176 aa24.17■■□□□ 1.46
MMP28-203ENST00000612672 CHSY1Q86X52 802 aa24.17■■□□□ 1.46
MMP28-203ENST00000612672 OXR1Q8N573 874 aa24.17■■□□□ 1.46
MMP28-203ENST00000612672 LSM14AQ8ND56 463 aaKnown RBP24.17■■□□□ 1.46
MMP28-203ENST00000612672 OR52K2Q8NGK3 314 aa24.17■■□□□ 1.46
MMP28-203ENST00000612672 PRMT1Q99873 361 aaKnown RBP24.17■■□□□ 1.46
MMP28-203ENST00000612672 PIEZO2Q9H5I5 2752 aa24.16■■□□□ 1.46
MMP28-203ENST00000612672 TEX51A0A1B0GUA7 166 aa24.16■■□□□ 1.46
MMP28-203ENST00000612672 FBXO21O94952 628 aa24.16■■□□□ 1.46
MMP28-203ENST00000612672 IGLV3-25P01717 112 aa24.16■■□□□ 1.46
MMP28-203ENST00000612672 GIMD1P0DJR0 217 aa24.16■■□□□ 1.46
MMP28-203ENST00000612672 MYF5P13349 255 aa24.16■■□□□ 1.46
MMP28-203ENST00000612672 TBXAS1P24557 533 aaPredicted RBP24.16■■□□□ 1.46
MMP28-203ENST00000612672 TAS2R38P59533 333 aa24.16■■□□□ 1.46
MMP28-203ENST00000612672 SLC45A4Q5BKX6 768 aa24.16■■□□□ 1.46
MMP28-203ENST00000612672 RNF219Q5W0B1 726 aaPredicted RBP24.16■■□□□ 1.46
MMP28-203ENST00000612672 CXorf57Q6NSI4 855 aaKnown RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms