RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 ATPAF2Q8N5M1 289 aa12.62□□□□□ -0.39
CBWD1-220ENST00000612045 GOLGA6L1Q8N7Z2 621 aa12.62□□□□□ -0.39
CBWD1-220ENST00000612045 MRPS31Q92665 395 aaKnown RBP12.62□□□□□ -0.39
CBWD1-220ENST00000612045 EXOC4Q96A65 974 aa12.62□□□□□ -0.39
CBWD1-220ENST00000612045 MYEOVQ96EZ4 313 aa12.62□□□□□ -0.39
CBWD1-220ENST00000612045 ZFRQ96KR1 1074 aaKnown RBP12.62□□□□□ -0.39
CBWD1-220ENST00000612045 NOL6Q9H6R4 1146 aaKnown RBP12.62□□□□□ -0.39
CBWD1-220ENST00000612045 MAN1C1Q9NR34 630 aa12.62□□□□□ -0.39
CBWD1-220ENST00000612045 YBX2Q9Y2T7 364 aaKnown RBP12.62□□□□□ -0.39
CBWD1-220ENST00000612045 MYO18AQ92614 2054 aaKnown RBP12.61□□□□□ -0.39
CBWD1-220ENST00000612045 CCDC85CA6NKD9 419 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 H3BNC9 293 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 ALOX15BO15296 676 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 MAFKO60675 156 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 SHBGP04278 402 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 IRF1P10914 325 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 HDCP19113 662 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 TPSB2P20231 275 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 CDC25CP30307 473 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 FDFT1P37268 417 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 PAPOLAP51003 745 aaKnown RBP12.61□□□□□ -0.39
CBWD1-220ENST00000612045 NDST2P52849 883 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 EIF3BP55884 814 aaKnown RBP12.61□□□□□ -0.39
CBWD1-220ENST00000612045 CYP4F8P98187 520 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 IFFO1Q0D2I5 559 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 PDIA2Q13087 525 aaKnown RBP12.61□□□□□ -0.39
CBWD1-220ENST00000612045 ZBTB17Q13105 803 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 GPM6BQ13491 265 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 FASTKD3Q14CZ7 662 aaKnown RBP12.61□□□□□ -0.39
CBWD1-220ENST00000612045 TPSAB1Q15661 275 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 C5orf22Q49AR2 442 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 MSS51Q4VC12 460 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 TEX44Q53QW1 395 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 CEP85LQ5SZL2 805 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 RFWD3Q6PCD5 774 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 PPP1R21Q6ZMI0 780 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 CIR1Q86X95 450 aaPredicted RBP12.61□□□□□ -0.39
CBWD1-220ENST00000612045 LRRC49Q8IUZ0 686 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 LGI2Q8N0V4 545 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 PDIK1LQ8N165 341 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 ARL14EPQ8N8R7 260 aaPredicted RBP12.61□□□□□ -0.39
CBWD1-220ENST00000612045 WBP2Q969T9 261 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 C9orf72Q96LT7 481 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 CORO1BQ9BR76 489 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 ASAH2Q9NR71 780 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 SMPD4Q9NXE4 827 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 KLHL8Q9P2G9 620 aaPredicted RBP12.61□□□□□ -0.39
CBWD1-220ENST00000612045 IGSF9Q9P2J2 1179 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 ZNF212Q9UDV6 495 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 SHROOM3Q8TF72 1996 aa12.61□□□□□ -0.39
CBWD1-220ENST00000612045 E7ESA3 106 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 E7EVH7 732 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 EIF3HO15372 352 aaKnown RBP eCLIP12.6□□□□□ -0.39
CBWD1-220ENST00000612045 CLASP2O75122 1294 aaKnown RBP12.6□□□□□ -0.39
CBWD1-220ENST00000612045 RFPL2O75678 378 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 JCHAINP01591 159 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 EPCAMP16422 314 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 PBX2P40425 430 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 PARP6Q2NL67 630 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 HP1BP3Q5SSJ5 553 aaPredicted RBP12.6□□□□□ -0.39
CBWD1-220ENST00000612045 PDE12Q6L8Q7 609 aaKnown RBP12.6□□□□□ -0.39
CBWD1-220ENST00000612045 PID1Q7Z2X4 250 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 ZBED8Q8IZ13 594 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 MCUQ8NE86 351 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 UHMK1Q8TAS1 419 aaKnown RBP12.6□□□□□ -0.39
CBWD1-220ENST00000612045 ZSCAN18Q8TBC5 510 aaPredicted RBP12.6□□□□□ -0.39
CBWD1-220ENST00000612045 SERPINB12Q96P63 405 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 GCNAQ96QF7 691 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 VAT1Q99536 393 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 FRMD8Q9BZ67 464 aaPredicted RBP12.6□□□□□ -0.39
CBWD1-220ENST00000612045 ATXN3LQ9H3M9 355 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 TRHDEQ9UKU6 1024 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 AGO1Q9UL18 857 aaKnown RBP12.6□□□□□ -0.39
CBWD1-220ENST00000612045 A0A1W2PRU2 124 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 F5H423 210 aaPredicted RBP12.6□□□□□ -0.39
CBWD1-220ENST00000612045 NRG2O14511 850 aaPredicted RBP12.6□□□□□ -0.39
CBWD1-220ENST00000612045 RNF40O75150 1001 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 BANF1O75531 89 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 MYL4P12829 197 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 PSMB4P28070 264 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 MAPKAPK2P49137 400 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 SMAD3P84022 425 aaKnown RBP12.6□□□□□ -0.39
CBWD1-220ENST00000612045 ZXDBP98169 803 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 ADGRF1Q5T601 910 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 CFAP52Q8N1V2 620 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 MAB21L3Q8N8X9 362 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 ARL8AQ96BM9 186 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 TEKT5Q96M29 485 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 TTC25Q96NG3 672 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 AGAP3Q96P47 875 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 HCFC1R1Q9NWW0 138 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 STOML2Q9UJZ1 356 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 CPQQ9Y646 472 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 DENND4CQ5VZ89 1909 aa12.6□□□□□ -0.39
CBWD1-220ENST00000612045 GOLGA6L10A6NI86 522 aa12.59□□□□□ -0.39
CBWD1-220ENST00000612045 RASA4BC9J798 803 aa12.59□□□□□ -0.39
CBWD1-220ENST00000612045 GOLGA8KD6RF30 607 aa12.59□□□□□ -0.39
CBWD1-220ENST00000612045 MATN3O15232 486 aa12.59□□□□□ -0.39
CBWD1-220ENST00000612045 ZBTB24O43167 697 aaPredicted RBP12.59□□□□□ -0.39
CBWD1-220ENST00000612045 RASA4O43374 803 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms