RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 THAP1Q9NVV9 213 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 TMEM160Q9NX00 188 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 KLQ9UEF7 1012 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 SLC25A13Q9UJS0 675 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 SLC13A4Q9UKG4 626 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 FNDC1Q4ZHG4 1894 aaPredicted RBP4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 NPIPB13A6NJU9 1138 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 NPIPB5A8MRT5 1133 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 NPIPB4C9JG80 1138 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 PEX12O00623 359 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 DSCR3O14972 297 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 INPPL1O15357 1258 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 ANP32CO43423 234 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 SOX2P48431 317 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 ADPRHP54922 357 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 VAMP2P63027 116 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 GOLGA8FQ08AF8 430 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 ANO7Q6IWH7 933 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 DENND1BQ6P3S1 775 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 ZNF474Q6S9Z5 364 aaPredicted RBP4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 VPS52Q8N1B4 723 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 ESX1Q8N693 406 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 C8orf58Q8NAV2 365 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 HTRA1Q92743 480 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 ATP2A3Q93084 1043 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 MASTLQ96GX5 879 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 GPR63Q9BZJ6 419 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 TRIM31Q9BZY9 425 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 ERVK-5Q9HDB9 667 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 ANAPC4Q9UJX5 808 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 SUFUQ9UMX1 484 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 GDAQ9Y2T3 454 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 KAT6AQ92794 2004 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 LMTK3Q96Q04 1460 aa4.73□□□□□ -1.65
SMCHD1-213ENST00000609587 WDR91A4D1P6 747 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 MCIDASD6RGH6 385 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 SYN3O14994 580 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 USP12O75317 370 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 WDHD1O75717 1129 aaPredicted RBP4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 PLAUP00749 431 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 PKMP14618 531 aaKnown RBP4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 ST6GAL1P15907 406 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 HOXB9P17482 250 aaPredicted RBP4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 RPS6KB1P23443 525 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 GSTM2P28161 218 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 AVPR2P30518 371 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 RPS6KA3P51812 740 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 OAZ1P54368 228 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 YPEL5P62699 121 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 TBX2Q13207 712 aaPredicted RBP4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 ZNF268Q14587 947 aaPredicted RBP4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 GXYLT1Q4G148 440 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 WDR45BQ5MNZ6 344 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 INTS11Q5TA45 600 aaKnown RBP4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 RBM44Q6ZP01 1051 aaKnown RBP4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 MDGA2Q7Z553 956 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 TMEM200AQ86VY9 491 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 SCN4BQ8IWT1 228 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 EXD3Q8N9H8 876 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 NAXEQ8NCW5 288 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 KAT2BQ92831 832 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 MAP4K1Q92918 833 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 HVCN1Q96D96 273 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 ADAD1Q96M93 576 aaKnown RBP4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 PPM1MQ96MI6 270 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 ZNF347Q96SE7 839 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 SLC22A11Q9NSA0 550 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 PKP3Q9Y446 797 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 AFG3L2Q9Y4W6 797 aa4.72□□□□□ -1.65
SMCHD1-213ENST00000609587 CCDC196A0A1B0GTZ2 297 aa4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 DHX16O60231 1041 aaKnown RBP4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 CCNT1O60563 726 aaKnown RBP4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 METTL18O95568 372 aa4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 IFIT1P09914 478 aaKnown RBP4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 WEE2P0C1S8 567 aa4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 CYP4B1P13584 511 aa4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 ARSAP15289 507 aa4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 CD53P19397 219 aa4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 CERS1P27544 350 aa4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 HOXA7P31268 230 aaPredicted RBP4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 SSBP2P81877 361 aaPredicted RBP4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 G3BP1Q13283 466 aaKnown RBP eCLIP4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 SLC4A8Q2Y0W8 1093 aa4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 LIPMQ5VYY2 423 aa4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 MIS18BP1Q6P0N0 1132 aa4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 MTFR2Q6P444 385 aa4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 RTL10Q7L3V2 364 aa4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 HEATR4Q86WZ0 1026 aa4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 FAM47BQ8NA70 645 aa4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 TEX19Q8NA77 164 aa4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 OR52N4Q8NGI2 321 aa4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 ZFPM2Q8WW38 1151 aa4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 DDB2Q92466 427 aa4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 SEC62Q99442 399 aaKnown RBP4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 STN1Q9H668 368 aaKnown RBP4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 MLXIPLQ9NP71 852 aa4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 TLR8Q9NR97 1041 aaKnown RBP4.71□□□□□ -1.66
SMCHD1-213ENST00000609587 ARL15Q9NXU5 204 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms