RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 SMTNL2Q2TAL5 461 aa14.65□□□□□ -0.06
CTSA-219ENST00000607841 FUT11Q495W5 492 aa14.65□□□□□ -0.06
CTSA-219ENST00000607841 PPP6R3Q5H9R7 873 aaPredicted RBP14.65□□□□□ -0.06
CTSA-219ENST00000607841 KCNT1Q5JUK3 1230 aa14.65□□□□□ -0.06
CTSA-219ENST00000607841 DAB2IPQ5VWQ8 1189 aa14.65□□□□□ -0.06
CTSA-219ENST00000607841 RNF219Q5W0B1 726 aaPredicted RBP14.65□□□□□ -0.06
CTSA-219ENST00000607841 EGFLAMQ63HQ2 1017 aa14.65□□□□□ -0.06
CTSA-219ENST00000607841 TMEM215Q68D42 235 aa14.65□□□□□ -0.06
CTSA-219ENST00000607841 CCDC33Q8N5R6 958 aa14.65□□□□□ -0.06
CTSA-219ENST00000607841 HSPH1Q92598 858 aa14.65□□□□□ -0.06
CTSA-219ENST00000607841 FEM1AQ9BSK4 669 aa14.65□□□□□ -0.06
CTSA-219ENST00000607841 MAGEB5Q9BZ81 275 aa14.65□□□□□ -0.06
CTSA-219ENST00000607841 IRF2BPLQ9H1B7 796 aa14.65□□□□□ -0.06
CTSA-219ENST00000607841 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.65□□□□□ -0.06
CTSA-219ENST00000607841 GPATCH2LQ9NWQ4 482 aa14.65□□□□□ -0.06
CTSA-219ENST00000607841 VPS28Q9UK41 221 aa14.65□□□□□ -0.06
CTSA-219ENST00000607841 REXO2Q9Y3B8 237 aaKnown RBP14.65□□□□□ -0.06
CTSA-219ENST00000607841 WASH4PA8MWX3 477 aa14.64□□□□□ -0.07
CTSA-219ENST00000607841 H3BRJ5 948 aa14.64□□□□□ -0.07
CTSA-219ENST00000607841 ZBTB24O43167 697 aaPredicted RBP14.64□□□□□ -0.07
CTSA-219ENST00000607841 PTMAP06454 111 aaKnown RBP14.64□□□□□ -0.07
CTSA-219ENST00000607841 SRPRAP08240 638 aaKnown RBP14.64□□□□□ -0.07
CTSA-219ENST00000607841 MZF1P28698 734 aaPredicted RBP14.64□□□□□ -0.07
CTSA-219ENST00000607841 NNMTP40261 264 aa14.64□□□□□ -0.07
CTSA-219ENST00000607841 DGKEP52429 567 aa14.64□□□□□ -0.07
CTSA-219ENST00000607841 NRLP54845 237 aa14.64□□□□□ -0.07
CTSA-219ENST00000607841 ECT2LQ008S8 904 aa14.64□□□□□ -0.07
CTSA-219ENST00000607841 SATB1Q01826 763 aa14.64□□□□□ -0.07
CTSA-219ENST00000607841 KRT81Q14533 505 aa14.64□□□□□ -0.07
CTSA-219ENST00000607841 ANGPT1Q15389 498 aa14.64□□□□□ -0.07
CTSA-219ENST00000607841 IFI16Q16666 785 aaKnown RBP14.64□□□□□ -0.07
CTSA-219ENST00000607841 CA9Q16790 459 aa14.64□□□□□ -0.07
CTSA-219ENST00000607841 ZFYVE27Q5T4F4 411 aa14.64□□□□□ -0.07
CTSA-219ENST00000607841 ARTNQ5T4W7 220 aa14.64□□□□□ -0.07
CTSA-219ENST00000607841 PKN3Q6P5Z2 889 aa14.64□□□□□ -0.07
CTSA-219ENST00000607841 SERPINA13PQ6UXR4 307 aa14.64□□□□□ -0.07
CTSA-219ENST00000607841 CYP4V2Q6ZWL3 525 aaPredicted RBP14.64□□□□□ -0.07
CTSA-219ENST00000607841 POLNQ7Z5Q5 900 aa14.64□□□□□ -0.07
CTSA-219ENST00000607841 NLRP14Q86W24 1093 aa14.64□□□□□ -0.07
CTSA-219ENST00000607841 MAP7D3Q8IWC1 876 aa14.64□□□□□ -0.07
CTSA-219ENST00000607841 APCDD1Q8J025 514 aa14.64□□□□□ -0.07
CTSA-219ENST00000607841 CAMKK1Q8N5S9 505 aa14.64□□□□□ -0.07
CTSA-219ENST00000607841 RTL3Q8N8U3 475 aaKnown RBP14.64□□□□□ -0.07
CTSA-219ENST00000607841 KDM1BQ8NB78 822 aa14.64□□□□□ -0.07
CTSA-219ENST00000607841 KCTD15Q96SI1 283 aaPredicted RBP14.64□□□□□ -0.07
CTSA-219ENST00000607841 GABRG3Q99928 467 aa14.64□□□□□ -0.07
CTSA-219ENST00000607841 DESI2Q9BSY9 194 aa14.64□□□□□ -0.07
CTSA-219ENST00000607841 C2orf49Q9BVC5 232 aaPredicted RBP14.64□□□□□ -0.07
CTSA-219ENST00000607841 POLMQ9NP87 494 aaPredicted RBP14.64□□□□□ -0.07
CTSA-219ENST00000607841 PRMT8Q9NR22 394 aaPredicted RBP14.64□□□□□ -0.07
CTSA-219ENST00000607841 ZNF212Q9UDV6 495 aa14.64□□□□□ -0.07
CTSA-219ENST00000607841 DNAI1Q9UI46 699 aa14.64□□□□□ -0.07
CTSA-219ENST00000607841 INTS6Q9UL03 887 aaKnown RBP14.64□□□□□ -0.07
CTSA-219ENST00000607841 TFR2Q9UP52 801 aa14.64□□□□□ -0.07
CTSA-219ENST00000607841 STON1Q9Y6Q2 735 aa14.64□□□□□ -0.07
CTSA-219ENST00000607841 SGK1O00141 431 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 SPOPO43791 374 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 SYNCRIPO60506 623 aaKnown RBP14.63□□□□□ -0.07
CTSA-219ENST00000607841 BUB1BO60566 1050 aaPredicted RBP14.63□□□□□ -0.07
CTSA-219ENST00000607841 RAMP2O60895 175 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 ALDH1A2O94788 518 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 CHRM1P11229 460 aaPredicted RBP14.63□□□□□ -0.07
CTSA-219ENST00000607841 HOXB2P14652 356 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 TCF4P15884 667 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 GNA12Q03113 381 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 CSTF1Q05048 431 aaKnown RBP14.63□□□□□ -0.07
CTSA-219ENST00000607841 ZNF234Q14588 700 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 STARD3Q14849 445 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 PDK2Q15119 407 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 CRY1Q16526 586 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 ZNF528Q3MIS6 628 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 FNDC3BQ53EP0 1204 aaKnown RBP14.63□□□□□ -0.07
CTSA-219ENST00000607841 ODF2Q5BJF6 829 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 LRRC38Q5VT99 294 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 RFX8Q6ZV50 586 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 RHOT1Q8IXI2 618 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 KCTD6Q8NC69 237 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 CYB5D2Q8WUJ1 264 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 SORCS1Q8WY21 1168 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 FAM126AQ9BYI3 521 aaPredicted RBP14.63□□□□□ -0.07
CTSA-219ENST00000607841 TSGA10Q9BZW7 698 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 LACRTQ9GZZ8 138 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 MAGEH1Q9H213 219 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 ZDHHC4Q9NPG8 344 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 CACNA2D2Q9NY47 1150 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 RCOR3Q9P2K3 495 aaPredicted RBP14.63□□□□□ -0.07
CTSA-219ENST00000607841 SLC25A13Q9UJS0 675 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 HCN2Q9UL51 889 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 NEU3Q9UQ49 428 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 OR51B4Q9Y5P0 310 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 ADGRG1Q9Y653 693 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 ALG6Q9Y672 507 aa14.63□□□□□ -0.07
CTSA-219ENST00000607841 RCCD1A6NED2 376 aa14.62□□□□□ -0.07
CTSA-219ENST00000607841 ANTXRLA6NF34 631 aa14.62□□□□□ -0.07
CTSA-219ENST00000607841 ADAM23O75077 832 aa14.62□□□□□ -0.07
CTSA-219ENST00000607841 APBB3O95704 486 aa14.62□□□□□ -0.07
CTSA-219ENST00000607841 CCDC175P0C221 793 aa14.62□□□□□ -0.07
CTSA-219ENST00000607841 GOT1P17174 413 aa14.62□□□□□ -0.07
CTSA-219ENST00000607841 COMTP21964 271 aa14.62□□□□□ -0.07
CTSA-219ENST00000607841 HOXA6P31267 233 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms