RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 BBS9Q3SYG4 887 aa22.11■■□□□ 1.13
USP6NL-204ENST00000606752 C5orf22Q49AR2 442 aa22.11■■□□□ 1.13
USP6NL-204ENST00000606752 HP1BP3Q5SSJ5 553 aaPredicted RBP22.11■■□□□ 1.13
USP6NL-204ENST00000606752 RTL10Q7L3V2 364 aa22.11■■□□□ 1.13
USP6NL-204ENST00000606752 SPRED2Q7Z698 418 aa22.11■■□□□ 1.13
USP6NL-204ENST00000606752 DENND1CQ8IV53 801 aa22.11■■□□□ 1.13
USP6NL-204ENST00000606752 ZSCAN18Q8TBC5 510 aaPredicted RBP22.11■■□□□ 1.13
USP6NL-204ENST00000606752 PYROXD1Q8WU10 500 aa22.11■■□□□ 1.13
USP6NL-204ENST00000606752 SERPINB12Q96P63 405 aa22.11■■□□□ 1.13
USP6NL-204ENST00000606752 LRRC3Q9BY71 257 aa22.11■■□□□ 1.13
USP6NL-204ENST00000606752 ROPN1BQ9BZX4 212 aaPredicted RBP22.11■■□□□ 1.13
USP6NL-204ENST00000606752 NOL6Q9H6R4 1146 aaKnown RBP22.11■■□□□ 1.13
USP6NL-204ENST00000606752 ROPN1Q9HAT0 212 aaPredicted RBP22.11■■□□□ 1.13
USP6NL-204ENST00000606752 LRRC4CQ9HCJ2 640 aa22.11■■□□□ 1.13
USP6NL-204ENST00000606752 GRM6O15303 877 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 C1RP00736 705 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 KLKB1P03952 638 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 MBL2P11226 248 aaPredicted RBP22.1■■□□□ 1.13
USP6NL-204ENST00000606752 CORO1AP31146 461 aaKnown RBP22.1■■□□□ 1.13
USP6NL-204ENST00000606752 PAPOLAP51003 745 aaKnown RBP22.1■■□□□ 1.13
USP6NL-204ENST00000606752 FAM133BQ5BKY9 247 aaKnown RBP22.1■■□□□ 1.13
USP6NL-204ENST00000606752 FAM109BQ6ICB4 259 aaPredicted RBP22.1■■□□□ 1.13
USP6NL-204ENST00000606752 ARHGAP36Q6ZRI8 547 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 GAREM2Q75VX8 874 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 TMC8Q8IU68 726 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 LGI2Q8N0V4 545 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 ATP6V1G3Q96LB4 118 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 RETREG1Q9H6L5 497 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 TRPC7Q9HCX4 862 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 EIF2B3Q9NR50 452 aaKnown RBP22.1■■□□□ 1.13
USP6NL-204ENST00000606752 ZNF212Q9UDV6 495 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.1■■□□□ 1.13
USP6NL-204ENST00000606752 GOLGA6CA6NDK9 693 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 MATN3O15232 486 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 BANF1O75531 89 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 OLFM2O95897 454 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 JCHAINP01591 159 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 GOLGA6DP0CG33 693 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 HDCP19113 662 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 PSMB4P28070 264 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 LMAN1P49257 510 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 SARNPP82979 210 aaKnown RBP22.1■■□□□ 1.13
USP6NL-204ENST00000606752 ZBTB17Q13105 803 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 CAMK1Q14012 370 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 SHHQ15465 462 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 PPM1LQ5SGD2 360 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 TIGD7Q6NT04 549 aaPredicted RBP22.1■■□□□ 1.13
USP6NL-204ENST00000606752 CAND1Q86VP6 1230 aaKnown RBP22.1■■□□□ 1.13
USP6NL-204ENST00000606752 ANKMY2Q8IV38 441 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 MRPS31Q92665 395 aaKnown RBP22.1■■□□□ 1.13
USP6NL-204ENST00000606752 TEKT5Q96M29 485 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 SAMD11Q96NU1 681 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 CYP2S1Q96SQ9 504 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 CENPHQ9H3R5 247 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 GOLGA6AQ9NYA3 693 aa22.1■■□□□ 1.13
USP6NL-204ENST00000606752 HMGB1P1B2RPK0 211 aaPredicted RBP22.09■■□□□ 1.13
USP6NL-204ENST00000606752 ZBTB24O43167 697 aaPredicted RBP22.09■■□□□ 1.13
USP6NL-204ENST00000606752 CA3P07451 260 aa22.09■■□□□ 1.13
USP6NL-204ENST00000606752 CCNB1P14635 433 aa22.09■■□□□ 1.13
USP6NL-204ENST00000606752 SLC6A4P31645 630 aa22.09■■□□□ 1.13
USP6NL-204ENST00000606752 MAPKAPK2P49137 400 aa22.09■■□□□ 1.13
USP6NL-204ENST00000606752 C6orf118Q5T5N4 469 aa22.09■■□□□ 1.13
USP6NL-204ENST00000606752 TXNDC8Q6A555 127 aa22.09■■□□□ 1.13
USP6NL-204ENST00000606752 ITPRIPL1Q6GPH6 555 aa22.09■■□□□ 1.13
USP6NL-204ENST00000606752 RFWD3Q6PCD5 774 aa22.09■■□□□ 1.13
USP6NL-204ENST00000606752 HS6ST3Q8IZP7 471 aa22.09■■□□□ 1.13
USP6NL-204ENST00000606752 ARL14EPQ8N8R7 260 aaPredicted RBP22.09■■□□□ 1.13
USP6NL-204ENST00000606752 MYEOVQ96EZ4 313 aa22.09■■□□□ 1.13
USP6NL-204ENST00000606752 AGAP3Q96P47 875 aa22.09■■□□□ 1.13
USP6NL-204ENST00000606752 TGS1Q96RS0 853 aaKnown RBP22.09■■□□□ 1.13
USP6NL-204ENST00000606752 CCDC77Q9BR77 488 aa22.09■■□□□ 1.13
USP6NL-204ENST00000606752 A0A087WUV0 522 aaPredicted RBP22.08■■□□□ 1.13
USP6NL-204ENST00000606752 ARHGAP42A6NI28 874 aa22.08■■□□□ 1.13
USP6NL-204ENST00000606752 RASGRF2O14827 1237 aa22.08■■□□□ 1.13
USP6NL-204ENST00000606752 IRS1P35568 1242 aa22.08■■□□□ 1.13
USP6NL-204ENST00000606752 MAGEA10P43363 369 aaPredicted RBP22.08■■□□□ 1.13
USP6NL-204ENST00000606752 IFI35P80217 286 aaPredicted RBP22.08■■□□□ 1.13
USP6NL-204ENST00000606752 AGBL2Q5U5Z8 902 aa22.08■■□□□ 1.13
USP6NL-204ENST00000606752 KCTD16Q68DU8 428 aa22.08■■□□□ 1.13
USP6NL-204ENST00000606752 FBXO36Q8NEA4 188 aa22.08■■□□□ 1.13
USP6NL-204ENST00000606752 SLC22A17Q8WUG5 538 aa22.08■■□□□ 1.13
USP6NL-204ENST00000606752 ZFRQ96KR1 1074 aaKnown RBP22.08■■□□□ 1.13
USP6NL-204ENST00000606752 SLC22A12Q96S37 553 aa22.08■■□□□ 1.13
USP6NL-204ENST00000606752 GBA3Q9H227 469 aa22.08■■□□□ 1.13
USP6NL-204ENST00000606752 XAB2Q9HCS7 855 aaKnown RBP22.08■■□□□ 1.13
USP6NL-204ENST00000606752 SMPD4Q9NXE4 827 aa22.08■■□□□ 1.13
USP6NL-204ENST00000606752 IPO11Q9UI26 975 aaKnown RBP22.08■■□□□ 1.13
USP6NL-204ENST00000606752 AGO1Q9UL18 857 aaKnown RBP22.08■■□□□ 1.13
USP6NL-204ENST00000606752 TLDC2A0PJX2 215 aa22.08■■□□□ 1.12
USP6NL-204ENST00000606752 RASA4BC9J798 803 aa22.08■■□□□ 1.12
USP6NL-204ENST00000606752 RASA4O43374 803 aa22.08■■□□□ 1.12
USP6NL-204ENST00000606752 AVILO75366 819 aa22.08■■□□□ 1.12
USP6NL-204ENST00000606752 TCEA3O75764 348 aa22.08■■□□□ 1.12
USP6NL-204ENST00000606752 IRF1P10914 325 aa22.08■■□□□ 1.12
USP6NL-204ENST00000606752 CDC25CP30307 473 aa22.08■■□□□ 1.12
USP6NL-204ENST00000606752 CD68P34810 354 aaPredicted RBP22.08■■□□□ 1.12
USP6NL-204ENST00000606752 SMAD3P84022 425 aaKnown RBP22.08■■□□□ 1.12
USP6NL-204ENST00000606752 MTM1Q13496 603 aa22.08■■□□□ 1.12
USP6NL-204ENST00000606752 STAT4Q14765 748 aa22.08■■□□□ 1.12
USP6NL-204ENST00000606752 CCDC38Q502W7 563 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms