RNA–Protein interactions for RNA: ENST00000602265.5

TIMM50-219, Transcript of translocase of inner mitochondrial membrane 50, human

TSL 2

Gene TIMM50, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TIMM50-219	ENST00000602265	NAV2	Q8IVL1	2488 aa		13.86	□□□□□ -0.19
TIMM50-219	ENST00000602265	TRIM38	O00635	465 aa		13.85	□□□□□ -0.19
TIMM50-219	ENST00000602265	GIMD1	P0DJR0	217 aa		13.85	□□□□□ -0.19
TIMM50-219	ENST00000602265	VAV1	P15498	845 aa		13.85	□□□□□ -0.19
TIMM50-219	ENST00000602265	GLDC	P23378	1020 aa		13.85	□□□□□ -0.19
TIMM50-219	ENST00000602265	MZF1	P28698	734 aa	Predicted RBP	13.85	□□□□□ -0.19
TIMM50-219	ENST00000602265	STK19	P49842	368 aa	Predicted RBP	13.85	□□□□□ -0.19
TIMM50-219	ENST00000602265	ECT2L	Q008S8	904 aa		13.85	□□□□□ -0.19
TIMM50-219	ENST00000602265	NNT	Q13423	1086 aa		13.85	□□□□□ -0.19
TIMM50-219	ENST00000602265	CNGA2	Q16280	664 aa		13.85	□□□□□ -0.19
TIMM50-219	ENST00000602265	ZNF605	Q86T29	641 aa		13.85	□□□□□ -0.19
TIMM50-219	ENST00000602265	SPACA3	Q8IXA5	215 aa		13.85	□□□□□ -0.19
TIMM50-219	ENST00000602265	SLC25A45	Q8N413	288 aa		13.85	□□□□□ -0.19
TIMM50-219	ENST00000602265	OR14C36	Q8NHC7	312 aa		13.85	□□□□□ -0.19
TIMM50-219	ENST00000602265	FRS2	Q8WU20	508 aa		13.85	□□□□□ -0.19
TIMM50-219	ENST00000602265	RPL10L	Q96L21	214 aa	Known RBP	13.85	□□□□□ -0.19
TIMM50-219	ENST00000602265	HSFY1	Q96LI6	401 aa		13.85	□□□□□ -0.19
TIMM50-219	ENST00000602265	XPO7	Q9UIA9	1087 aa	Known RBP	13.85	□□□□□ -0.19
TIMM50-219	ENST00000602265	TLR6	Q9Y2C9	796 aa		13.85	□□□□□ -0.19
TIMM50-219	ENST00000602265	TRPM6	Q9BX84	2022 aa		13.85	□□□□□ -0.19
TIMM50-219	ENST00000602265	DOCK4	Q8N1I0	1966 aa		13.84	□□□□□ -0.19
TIMM50-219	ENST00000602265	CETN3	O15182	167 aa		13.84	□□□□□ -0.19
TIMM50-219	ENST00000602265	PLRG1	O43660	514 aa	Known RBP	13.84	□□□□□ -0.19
TIMM50-219	ENST00000602265	IL1B	P01584	269 aa		13.84	□□□□□ -0.19
TIMM50-219	ENST00000602265	PAEP	P09466	180 aa		13.84	□□□□□ -0.19
TIMM50-219	ENST00000602265	ACTN2	P35609	894 aa		13.84	□□□□□ -0.19
TIMM50-219	ENST00000602265	SYK	P43405	635 aa		13.84	□□□□□ -0.19
TIMM50-219	ENST00000602265	CFHR1	Q03591	330 aa		13.84	□□□□□ -0.19
TIMM50-219	ENST00000602265	EIF4EBP2	Q13542	120 aa	Predicted RBP	13.84	□□□□□ -0.19
TIMM50-219	ENST00000602265	CDH18	Q13634	790 aa		13.84	□□□□□ -0.19
TIMM50-219	ENST00000602265	ELAVL3	Q14576	367 aa	Known RBP	13.84	□□□□□ -0.19
TIMM50-219	ENST00000602265	SLC45A4	Q5BKX6	768 aa		13.84	□□□□□ -0.19
TIMM50-219	ENST00000602265	CDCP2	Q5VXM1	449 aa		13.84	□□□□□ -0.19
TIMM50-219	ENST00000602265	KRBA2	Q6ZNG9	492 aa		13.84	□□□□□ -0.19
TIMM50-219	ENST00000602265	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.84	□□□□□ -0.19
TIMM50-219	ENST00000602265	SLC35C1	Q96A29	364 aa		13.84	□□□□□ -0.19
TIMM50-219	ENST00000602265	HIC2	Q96JB3	615 aa		13.84	□□□□□ -0.19
TIMM50-219	ENST00000602265	SERPINB11	Q96P15	392 aa		13.84	□□□□□ -0.19
TIMM50-219	ENST00000602265	DDX50	Q9BQ39	737 aa	Known RBP	13.84	□□□□□ -0.19
TIMM50-219	ENST00000602265	KDM4C	Q9H3R0	1056 aa		13.84	□□□□□ -0.19
TIMM50-219	ENST00000602265	SARDH	Q9UL12	918 aa		13.84	□□□□□ -0.19
TIMM50-219	ENST00000602265	NAALADL1	Q9UQQ1	740 aa		13.84	□□□□□ -0.19
TIMM50-219	ENST00000602265	PCDHB1	Q9Y5F3	818 aa		13.84	□□□□□ -0.19
TIMM50-219	ENST00000602265	TBC1D3D	A0A087WVF3	549 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	TBC1D3I	A0A087WXS9	549 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	TBC1D3E	A0A087X179	549 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	TBC1D3K	A0A087X1G2	549 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	TBC1D3F	A6NER0	549 aa	Predicted RBP	13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	CYSRT1	A8MQ03	144 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	TBC1D3L	B9A6J9	549 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	SLC7A4	O43246	635 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	SIGLEC6	O43699	453 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	FBXO21	O94952	628 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	MT-CO3	P00414	261 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	CALCA	P01258	141 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	IGLV3-25	P01717	112 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	TBC1D3H	P0C7X1	549 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	EPB41	P11171	864 aa	Known RBP	13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	VASP	P50552	380 aa	Predicted RBP	13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	PLK1	P53350	603 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	YWHAE	P62258	255 aa	Known RBP	13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	CCDC173	Q0VFZ6	552 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	OVGP1	Q12889	678 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	LRMP	Q12912	555 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	ZNF211	Q13398	564 aa	Predicted RBP	13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	AGBL4	Q5VU57	503 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	SYPL2	Q5VXT5	272 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	TBC1D3G	Q6DHY5	549 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	TBC1D3C	Q6IPX1	549 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	TMEM270	Q6UE05	265 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	BEND5	Q7L4P6	421 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	TAC4	Q86UU9	113 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	TRIM69	Q86WT6	500 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	TBC1D3	Q8IZP1	549 aa	Predicted RBP	13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	KAT5	Q92993	513 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	CCDC47	Q96A33	483 aa	Known RBP	13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	PRMT1	Q99873	361 aa	Known RBP	13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	CAAP1	Q9H8G2	361 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	DMTF1	Q9Y222	760 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	RP1	P56715	2156 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	PIEZO2	Q9H5I5	2752 aa		13.83	□□□□□ -0.2
TIMM50-219	ENST00000602265	TYW5	A2RUC4	315 aa	Known RBP	13.82	□□□□□ -0.2
TIMM50-219	ENST00000602265	SLC16A3	O15427	465 aa	Known RBP	13.82	□□□□□ -0.2
TIMM50-219	ENST00000602265	SDC3	O75056	442 aa		13.82	□□□□□ -0.2
TIMM50-219	ENST00000602265	RTN2	O75298	545 aa		13.82	□□□□□ -0.2
TIMM50-219	ENST00000602265	TACR2	P21452	398 aa		13.82	□□□□□ -0.2
TIMM50-219	ENST00000602265	TBXAS1	P24557	533 aa	Predicted RBP	13.82	□□□□□ -0.2
TIMM50-219	ENST00000602265	BRD2	P25440	801 aa	Known RBP	13.82	□□□□□ -0.2
TIMM50-219	ENST00000602265	NUDT1	P36639	197 aa		13.82	□□□□□ -0.2
TIMM50-219	ENST00000602265	PMS1	P54277	932 aa	Known RBP	13.82	□□□□□ -0.2
TIMM50-219	ENST00000602265	TAS2R38	P59533	333 aa		13.82	□□□□□ -0.2
TIMM50-219	ENST00000602265	CXADR	P78310	365 aa		13.82	□□□□□ -0.2
TIMM50-219	ENST00000602265	E2F1	Q01094	437 aa		13.82	□□□□□ -0.2
TIMM50-219	ENST00000602265	SLC12A1	Q13621	1099 aa		13.82	□□□□□ -0.2
TIMM50-219	ENST00000602265	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.82	□□□□□ -0.2
TIMM50-219	ENST00000602265	TCERG1L	Q5VWI1	586 aa		13.82	□□□□□ -0.2
TIMM50-219	ENST00000602265	RAP1GAP2	Q684P5	730 aa		13.82	□□□□□ -0.2
TIMM50-219	ENST00000602265	CXorf57	Q6NSI4	855 aa	Known RBP	13.82	□□□□□ -0.2
TIMM50-219	ENST00000602265	PRPF39	Q86UA1	669 aa	Known RBP	13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms