RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 SPATA21Q7Z572 469 aa12.02□□□□□ -0.49
VRK3-223ENST00000601341 SLC22A17Q8WUG5 538 aa12.02□□□□□ -0.49
VRK3-223ENST00000601341 C9orf72Q96LT7 481 aa12.02□□□□□ -0.49
VRK3-223ENST00000601341 CSPG4P5Q96PW8 444 aa12.02□□□□□ -0.49
VRK3-223ENST00000601341 MAGEB5Q9BZ81 275 aa12.02□□□□□ -0.49
VRK3-223ENST00000601341 OSBPL2Q9H1P3 480 aa12.02□□□□□ -0.49
VRK3-223ENST00000601341 KCNK9Q9NPC2 374 aa12.02□□□□□ -0.49
VRK3-223ENST00000601341 ANLNQ9NQW6 1124 aa12.02□□□□□ -0.49
VRK3-223ENST00000601341 OR12D3Q9UGF7 316 aa12.02□□□□□ -0.49
VRK3-223ENST00000601341 PRKAG3Q9UGI9 489 aa12.02□□□□□ -0.49
VRK3-223ENST00000601341 HBS1LQ9Y450 684 aaKnown RBP12.02□□□□□ -0.49
VRK3-223ENST00000601341 CHD9Q3L8U1 2897 aa12.01□□□□□ -0.49
VRK3-223ENST00000601341 CHD7Q9P2D1 2997 aa12.01□□□□□ -0.49
VRK3-223ENST00000601341 SLC12A8A0AV02 714 aa12.01□□□□□ -0.49
VRK3-223ENST00000601341 I6L893 689 aaPredicted RBP12.01□□□□□ -0.49
VRK3-223ENST00000601341 EEF2KO00418 725 aaKnown RBP12.01□□□□□ -0.49
VRK3-223ENST00000601341 PER2O15055 1255 aa12.01□□□□□ -0.49
VRK3-223ENST00000601341 CREB3O43889 395 aa12.01□□□□□ -0.49
VRK3-223ENST00000601341 MGRN1O60291 552 aa12.01□□□□□ -0.49
VRK3-223ENST00000601341 SPAG6O75602 509 aa12.01□□□□□ -0.49
VRK3-223ENST00000601341 HNRNPA1P09651 372 aaKnown RBP eCLIP12.01□□□□□ -0.49
VRK3-223ENST00000601341 ZFXP17010 805 aaPredicted RBP12.01□□□□□ -0.49
VRK3-223ENST00000601341 GOT1P17174 413 aa12.01□□□□□ -0.49
VRK3-223ENST00000601341 HOXA9P31269 272 aa12.01□□□□□ -0.49
VRK3-223ENST00000601341 IFNAR2P48551 515 aa12.01□□□□□ -0.49
VRK3-223ENST00000601341 HCAR3P49019 387 aa12.01□□□□□ -0.49
VRK3-223ENST00000601341 ARL4CP56559 192 aa12.01□□□□□ -0.49
VRK3-223ENST00000601341 SEMA3BQ13214 749 aa12.01□□□□□ -0.49
VRK3-223ENST00000601341 KLHL38Q2WGJ6 581 aa12.01□□□□□ -0.49
VRK3-223ENST00000601341 ACBD5Q5T8D3 534 aaPredicted RBP12.01□□□□□ -0.49
VRK3-223ENST00000601341 NUGGCQ68CJ6 796 aa12.01□□□□□ -0.49
VRK3-223ENST00000601341 SLC9A4Q6AI14 798 aa12.01□□□□□ -0.49
VRK3-223ENST00000601341 CYB5D1Q6P9G0 228 aa12.01□□□□□ -0.49
VRK3-223ENST00000601341 TMEM150AQ86TG1 271 aa12.01□□□□□ -0.49
VRK3-223ENST00000601341 SRRM1Q8IYB3 904 aaKnown RBP12.01□□□□□ -0.49
VRK3-223ENST00000601341 ATP11CQ8NB49 1132 aa12.01□□□□□ -0.49
VRK3-223ENST00000601341 PCDH19Q8TAB3 1148 aa12.01□□□□□ -0.49
VRK3-223ENST00000601341 DENND1AQ8TEH3 1009 aa12.01□□□□□ -0.49
VRK3-223ENST00000601341 ALKBH8Q96BT7 664 aaKnown RBP12.01□□□□□ -0.49
VRK3-223ENST00000601341 TIFAQ96CG3 184 aa12.01□□□□□ -0.49
VRK3-223ENST00000601341 FCRL2Q96LA5 508 aaPredicted RBP12.01□□□□□ -0.49
VRK3-223ENST00000601341 EPAS1Q99814 870 aa12.01□□□□□ -0.49
VRK3-223ENST00000601341 IL21Q9HBE4 155 aa12.01□□□□□ -0.49
VRK3-223ENST00000601341 ZNF334Q9HCZ1 680 aaPredicted RBP12.01□□□□□ -0.49
VRK3-223ENST00000601341 PSMC3IPQ9P2W1 217 aaPredicted RBP12.01□□□□□ -0.49
VRK3-223ENST00000601341 STARD13Q9Y3M8 1113 aa12.01□□□□□ -0.49
VRK3-223ENST00000601341 LAMA3Q16787 3333 aa12.01□□□□□ -0.49
VRK3-223ENST00000601341 SGK1O00141 431 aa12□□□□□ -0.49
VRK3-223ENST00000601341 APOL1O14791 398 aa12□□□□□ -0.49
VRK3-223ENST00000601341 CCL16O15467 120 aa12□□□□□ -0.49
VRK3-223ENST00000601341 COCHO43405 550 aa12□□□□□ -0.49
VRK3-223ENST00000601341 XYLBO75191 536 aa12□□□□□ -0.49
VRK3-223ENST00000601341 PAGE1O75459 146 aa12□□□□□ -0.49
VRK3-223ENST00000601341 ASMTLO95671 621 aa12□□□□□ -0.49
VRK3-223ENST00000601341 EPCAMP16422 314 aa12□□□□□ -0.49
VRK3-223ENST00000601341 TGM2P21980 687 aa12□□□□□ -0.49
VRK3-223ENST00000601341 GABRR2P28476 465 aa12□□□□□ -0.49
VRK3-223ENST00000601341 GCAP28676 217 aa12□□□□□ -0.49
VRK3-223ENST00000601341 CDC25CP30307 473 aa12□□□□□ -0.49
VRK3-223ENST00000601341 GEMIN4P57678 1058 aaKnown RBP12□□□□□ -0.49
VRK3-223ENST00000601341 COG7P83436 770 aa12□□□□□ -0.49
VRK3-223ENST00000601341 SMAD3P84022 425 aaKnown RBP12□□□□□ -0.49
VRK3-223ENST00000601341 MPP2Q14168 576 aa12□□□□□ -0.49
VRK3-223ENST00000601341 SPARCL1Q14515 664 aa12□□□□□ -0.49
VRK3-223ENST00000601341 RFX8Q6ZV50 586 aa12□□□□□ -0.49
VRK3-223ENST00000601341 RBM23Q86U06 439 aaKnown RBP12□□□□□ -0.49
VRK3-223ENST00000601341 UNC45BQ8IWX7 931 aa12□□□□□ -0.49
VRK3-223ENST00000601341 CYP4X1Q8N118 509 aa12□□□□□ -0.49
VRK3-223ENST00000601341 PQLC3Q8N755 202 aa12□□□□□ -0.49
VRK3-223ENST00000601341 PLD5Q8N7P1 536 aa12□□□□□ -0.49
VRK3-223ENST00000601341 ATP6V0D2Q8N8Y2 350 aa12□□□□□ -0.49
VRK3-223ENST00000601341 NAT8LQ8N9F0 302 aa12□□□□□ -0.49
VRK3-223ENST00000601341 ACTL9Q8TC94 416 aa12□□□□□ -0.49
VRK3-223ENST00000601341 GDPD5Q8WTR4 605 aa12□□□□□ -0.49
VRK3-223ENST00000601341 MRPS31Q92665 395 aaKnown RBP12□□□□□ -0.49
VRK3-223ENST00000601341 BTN2A3PQ96KV6 586 aa12□□□□□ -0.49
VRK3-223ENST00000601341 C1orf74Q96LT6 269 aa12□□□□□ -0.49
VRK3-223ENST00000601341 GCNAQ96QF7 691 aa12□□□□□ -0.49
VRK3-223ENST00000601341 SMC6Q96SB8 1091 aa12□□□□□ -0.49
VRK3-223ENST00000601341 DHRS4Q9BTZ2 278 aa12□□□□□ -0.49
VRK3-223ENST00000601341 TLE6Q9H808 572 aa12□□□□□ -0.49
VRK3-223ENST00000601341 ASAH2Q9NR71 780 aa12□□□□□ -0.49
VRK3-223ENST00000601341 FGFR1OP2Q9NVK5 253 aa12□□□□□ -0.49
VRK3-223ENST00000601341 KLHL14Q9P2G3 628 aa12□□□□□ -0.49
VRK3-223ENST00000601341 CTNNAL1Q9UBT7 734 aa12□□□□□ -0.49
VRK3-223ENST00000601341 HCFC2Q9Y5Z7 792 aa12□□□□□ -0.49
VRK3-223ENST00000601341 MYO16Q9Y6X6 1858 aa12□□□□□ -0.49
VRK3-223ENST00000601341 GREB1Q4ZG55 1949 aa12□□□□□ -0.49
VRK3-223ENST00000601341 FAM72CH0Y354 149 aa12□□□□□ -0.49
VRK3-223ENST00000601341 RFPL2O75678 378 aa12□□□□□ -0.49
VRK3-223ENST00000601341 ZWINTO95229 277 aa12□□□□□ -0.49
VRK3-223ENST00000601341 FGF19O95750 216 aa12□□□□□ -0.49
VRK3-223ENST00000601341 MOCS2O96007 188 aaPredicted RBP12□□□□□ -0.49
VRK3-223ENST00000601341 IGLV3-27P01718 113 aa12□□□□□ -0.49
VRK3-223ENST00000601341 SLC8A1P32418 973 aa12□□□□□ -0.49
VRK3-223ENST00000601341 HTR7P34969 479 aa12□□□□□ -0.49
VRK3-223ENST00000601341 TPI1P60174 286 aa12□□□□□ -0.49
VRK3-223ENST00000601341 OTUD4Q01804 1114 aaKnown RBP12□□□□□ -0.49
VRK3-223ENST00000601341 BNIP1Q12981 228 aa12□□□□□ -0.49
VRK3-223ENST00000601341 FAM72AQ5TYM5 149 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms