RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 DNAJC17Q9NVM6 304 aaKnown RBP18.1■□□□□ 0.49
SHKBP1-224ENST00000600718 GOLGA8MH3BSY2 632 aa18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 KCNK1O00180 336 aa18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 ALOX15BO15296 676 aa18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 TMEM63AO94886 807 aa18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 TTC4O95801 387 aa18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 NUDT17P0C025 328 aa18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 MYL4P12829 197 aa18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 PTPN2P17706 415 aa18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 SLC6A4P31645 630 aa18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 MAPKAPK2P49137 400 aa18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 IRAK1P51617 712 aa18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 CBLBQ13191 982 aa18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 SLC29A2Q14542 456 aa18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 TEX44Q53QW1 395 aa18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 RABGAP1LQ5R372 815 aa18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 ADGRF1Q5T601 910 aa18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 COL13A1Q5TAT6 717 aaPredicted RBP18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 TIGD7Q6NT04 549 aaPredicted RBP18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 MCUQ8NE86 351 aa18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 DEPDC1BQ8WUY9 529 aa18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 ZFRQ96KR1 1074 aaKnown RBP18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 SLC22A12Q96S37 553 aa18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 SAYSD1Q9NPB0 183 aa18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 KLHL8Q9P2G9 620 aaPredicted RBP18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 IGSF9Q9P2J2 1179 aa18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 STOML2Q9UJZ1 356 aa18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 AGO1Q9UL18 857 aaKnown RBP18.09■□□□□ 0.49
SHKBP1-224ENST00000600718 MAFKO60675 156 aa18.08■□□□□ 0.49
SHKBP1-224ENST00000600718 SYF2O95926 243 aaKnown RBP18.08■□□□□ 0.49
SHKBP1-224ENST00000600718 IRF1P10914 325 aa18.08■□□□□ 0.49
SHKBP1-224ENST00000600718 EPCAMP16422 314 aa18.08■□□□□ 0.49
SHKBP1-224ENST00000600718 TPSB2P20231 275 aa18.08■□□□□ 0.49
SHKBP1-224ENST00000600718 PBX2P40425 430 aa18.08■□□□□ 0.49
SHKBP1-224ENST00000600718 PAPOLAP51003 745 aaKnown RBP18.08■□□□□ 0.49
SHKBP1-224ENST00000600718 EPHA5P54756 1037 aa18.08■□□□□ 0.49
SHKBP1-224ENST00000600718 SLC7A9P82251 487 aa18.08■□□□□ 0.49
SHKBP1-224ENST00000600718 SMAD3P84022 425 aaKnown RBP18.08■□□□□ 0.49
SHKBP1-224ENST00000600718 CYP4F8P98187 520 aa18.08■□□□□ 0.49
SHKBP1-224ENST00000600718 TPSAB1Q15661 275 aa18.08■□□□□ 0.49
SHKBP1-224ENST00000600718 FAXCQ5TGI0 409 aa18.08■□□□□ 0.49
SHKBP1-224ENST00000600718 TFAP2DQ7Z6R9 452 aa18.08■□□□□ 0.49
SHKBP1-224ENST00000600718 PDIK1LQ8N165 341 aa18.08■□□□□ 0.49
SHKBP1-224ENST00000600718 SH3GL2Q99962 352 aa18.08■□□□□ 0.49
SHKBP1-224ENST00000600718 NOL6Q9H6R4 1146 aaKnown RBP18.08■□□□□ 0.49
SHKBP1-224ENST00000600718 SMPD4Q9NXE4 827 aa18.08■□□□□ 0.49
SHKBP1-224ENST00000600718 ZNF212Q9UDV6 495 aa18.08■□□□□ 0.49
SHKBP1-224ENST00000600718 MSRAQ9UJ68 235 aa18.08■□□□□ 0.49
SHKBP1-224ENST00000600718 TRAV19A0A0A6YYK7 116 aa18.08■□□□□ 0.48
SHKBP1-224ENST00000600718 ARHGAP42A6NI28 874 aa18.08■□□□□ 0.48
SHKBP1-224ENST00000600718 E7ESA3 106 aa18.08■□□□□ 0.48
SHKBP1-224ENST00000600718 E7EVH7 732 aa18.08■□□□□ 0.48
SHKBP1-224ENST00000600718 MATN3O15232 486 aa18.08■□□□□ 0.48
SHKBP1-224ENST00000600718 XYLBO75191 536 aa18.08■□□□□ 0.48
SHKBP1-224ENST00000600718 APRTP07741 180 aa18.08■□□□□ 0.48
SHKBP1-224ENST00000600718 YBEYP58557 167 aaPredicted RBP18.08■□□□□ 0.48
SHKBP1-224ENST00000600718 CDK16Q00536 496 aa18.08■□□□□ 0.48
SHKBP1-224ENST00000600718 RAB30Q15771 203 aa18.08■□□□□ 0.48
SHKBP1-224ENST00000600718 FAM182AQ5T1J6 154 aa18.08■□□□□ 0.48
SHKBP1-224ENST00000600718 ELMSAN1Q6PJG2 1045 aa18.08■□□□□ 0.48
SHKBP1-224ENST00000600718 GOLGA6L1Q8N7Z2 621 aa18.08■□□□□ 0.48
SHKBP1-224ENST00000600718 MAB21L3Q8N8X9 362 aa18.08■□□□□ 0.48
SHKBP1-224ENST00000600718 LEMD2Q8NC56 503 aa18.08■□□□□ 0.48
SHKBP1-224ENST00000600718 TTC25Q96NG3 672 aa18.08■□□□□ 0.48
SHKBP1-224ENST00000600718 GDF15Q99988 308 aa18.08■□□□□ 0.48
SHKBP1-224ENST00000600718 PBX4Q9BYU1 374 aa18.08■□□□□ 0.48
SHKBP1-224ENST00000600718 LMAN2LQ9H0V9 348 aa18.08■□□□□ 0.48
SHKBP1-224ENST00000600718 NINJ2Q9NZG7 142 aa18.08■□□□□ 0.48
SHKBP1-224ENST00000600718 CPQQ9Y646 472 aa18.08■□□□□ 0.48
SHKBP1-224ENST00000600718 A0A1W2PRU2 124 aa18.07■□□□□ 0.48
SHKBP1-224ENST00000600718 RFPL2O75678 378 aa18.07■□□□□ 0.48
SHKBP1-224ENST00000600718 CDH4P55283 916 aa18.07■□□□□ 0.48
SHKBP1-224ENST00000600718 IFI35P80217 286 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-224ENST00000600718 GAD2Q05329 585 aa18.07■□□□□ 0.48
SHKBP1-224ENST00000600718 PDIA2Q13087 525 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-224ENST00000600718 KYNUQ16719 465 aa18.07■□□□□ 0.48
SHKBP1-224ENST00000600718 FNBP1LQ5T0N5 605 aa18.07■□□□□ 0.48
SHKBP1-224ENST00000600718 ITPRIPL1Q6GPH6 555 aa18.07■□□□□ 0.48
SHKBP1-224ENST00000600718 RFWD3Q6PCD5 774 aa18.07■□□□□ 0.48
SHKBP1-224ENST00000600718 ZSCAN18Q8TBC5 510 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-224ENST00000600718 FATE1Q969F0 183 aa18.07■□□□□ 0.48
SHKBP1-224ENST00000600718 WBP2Q969T9 261 aa18.07■□□□□ 0.48
SHKBP1-224ENST00000600718 ZBTB9Q96C00 473 aa18.07■□□□□ 0.48
SHKBP1-224ENST00000600718 MYEOVQ96EZ4 313 aa18.07■□□□□ 0.48
SHKBP1-224ENST00000600718 EIF2B3Q9NR50 452 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-224ENST00000600718 ZDHHC7Q9NXF8 308 aa18.07■□□□□ 0.48
SHKBP1-224ENST00000600718 RASA4BC9J798 803 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 H3BQF6 201 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 RASA4O43374 803 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 JCHAINP01591 159 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 CCNB1P14635 433 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 DDX6P26196 483 aaKnown RBP eCLIP18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 OR1E1P30953 314 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 HNRNPH2P55795 449 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 SARNPP82979 210 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 IFFO1Q0D2I5 559 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 PARP15Q460N3 678 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 ARHGAP36Q6ZRI8 547 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 ADAMTS19Q8TE59 1207 aa18.06■□□□□ 0.48
SHKBP1-224ENST00000600718 TEKT5Q96M29 485 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms