RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 EDAQ92838 391 aa20.56■□□□□ 0.88
SHKBP1-222ENST00000600320 ALG14Q96F25 216 aa20.56■□□□□ 0.88
SHKBP1-222ENST00000600320 RNF157Q96PX1 679 aa20.56■□□□□ 0.88
SHKBP1-222ENST00000600320 HERPUD2Q9BSE4 406 aa20.56■□□□□ 0.88
SHKBP1-222ENST00000600320 SLC27A6Q9Y2P4 619 aa20.56■□□□□ 0.88
SHKBP1-222ENST00000600320 NCOR1O75376 2440 aa20.55■□□□□ 0.88
SHKBP1-222ENST00000600320 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.55■□□□□ 0.88
SHKBP1-222ENST00000600320 ZNF487B1APH4 448 aa20.55■□□□□ 0.88
SHKBP1-222ENST00000600320 ENC1O14682 589 aa20.55■□□□□ 0.88
SHKBP1-222ENST00000600320 KRT10P13645 584 aa20.55■□□□□ 0.88
SHKBP1-222ENST00000600320 STARD6P59095 220 aa20.55■□□□□ 0.88
SHKBP1-222ENST00000600320 GNG11P61952 73 aa20.55■□□□□ 0.88
SHKBP1-222ENST00000600320 SIGLEC14Q08ET2 396 aa20.55■□□□□ 0.88
SHKBP1-222ENST00000600320 ODF2Q5BJF6 829 aa20.55■□□□□ 0.88
SHKBP1-222ENST00000600320 TMEM196Q5HYL7 178 aa20.55■□□□□ 0.88
SHKBP1-222ENST00000600320 RNF219Q5W0B1 726 aaPredicted RBP20.55■□□□□ 0.88
SHKBP1-222ENST00000600320 TMEM215Q68D42 235 aa20.55■□□□□ 0.88
SHKBP1-222ENST00000600320 NCBP2-AS2Q69YL0 99 aa20.55■□□□□ 0.88
SHKBP1-222ENST00000600320 SETD3Q86TU7 594 aaPredicted RBP20.55■□□□□ 0.88
SHKBP1-222ENST00000600320 TP53INP2Q8IXH6 220 aa20.55■□□□□ 0.88
SHKBP1-222ENST00000600320 APCDD1Q8J025 514 aa20.55■□□□□ 0.88
SHKBP1-222ENST00000600320 TERB1Q8NA31 727 aa20.55■□□□□ 0.88
SHKBP1-222ENST00000600320 OR7D4Q8NG98 312 aa20.55■□□□□ 0.88
SHKBP1-222ENST00000600320 RBM41Q96IZ5 413 aaKnown RBP20.55■□□□□ 0.88
SHKBP1-222ENST00000600320 WDR24Q96S15 920 aa20.55■□□□□ 0.88
SHKBP1-222ENST00000600320 KIAA1522Q9P206 1035 aaPredicted RBP20.55■□□□□ 0.88
SHKBP1-222ENST00000600320 GGA2Q9UJY4 613 aa20.55■□□□□ 0.88
SHKBP1-222ENST00000600320 OR51B4Q9Y5P0 310 aa20.55■□□□□ 0.88
SHKBP1-222ENST00000600320 F5P12259 2224 aa20.55■□□□□ 0.88
SHKBP1-222ENST00000600320 hCG_1818297A0A087WSY0 165 aa20.54■□□□□ 0.88
SHKBP1-222ENST00000600320 A0A0D9SEW6 157 aa20.54■□□□□ 0.88
SHKBP1-222ENST00000600320 PRRT4C9JH25 899 aa20.54■□□□□ 0.88
SHKBP1-222ENST00000600320 TNFRSF10AO00220 468 aa20.54■□□□□ 0.88
SHKBP1-222ENST00000600320 MAN2B1O00754 1011 aa20.54■□□□□ 0.88
SHKBP1-222ENST00000600320 KAT7O95251 611 aa20.54■□□□□ 0.88
SHKBP1-222ENST00000600320 EGFP01133 1207 aa20.54■□□□□ 0.88
SHKBP1-222ENST00000600320 ATP1A1P05023 1023 aaKnown RBP20.54■□□□□ 0.88
SHKBP1-222ENST00000600320 ADCY2Q08462 1091 aa20.54■□□□□ 0.88
SHKBP1-222ENST00000600320 FUT11Q495W5 492 aa20.54■□□□□ 0.88
SHKBP1-222ENST00000600320 C6orf118Q5T5N4 469 aa20.54■□□□□ 0.88
SHKBP1-222ENST00000600320 VSIG1Q86XK7 387 aa20.54■□□□□ 0.88
SHKBP1-222ENST00000600320 RFX6Q8HWS3 928 aa20.54■□□□□ 0.88
SHKBP1-222ENST00000600320 CCDC50Q8IVM0 306 aa20.54■□□□□ 0.88
SHKBP1-222ENST00000600320 CCDC117Q8IWD4 279 aaPredicted RBP20.54■□□□□ 0.88
SHKBP1-222ENST00000600320 ZNF687Q8N1G0 1237 aa20.54■□□□□ 0.88
SHKBP1-222ENST00000600320 CELF6Q96J87 481 aaKnown RBP20.54■□□□□ 0.88
SHKBP1-222ENST00000600320 PSMB7Q99436 277 aa20.54■□□□□ 0.88
SHKBP1-222ENST00000600320 RETREG1Q9H6L5 497 aa20.54■□□□□ 0.88
SHKBP1-222ENST00000600320 ILVBLA1L0T0 632 aa20.53■□□□□ 0.88
SHKBP1-222ENST00000600320 FANCGO15287 622 aa20.53■□□□□ 0.88
SHKBP1-222ENST00000600320 APODP05090 189 aa20.53■□□□□ 0.88
SHKBP1-222ENST00000600320 TARSP26639 723 aaKnown RBP20.53■□□□□ 0.88
SHKBP1-222ENST00000600320 DEKP35659 375 aaKnown RBP20.53■□□□□ 0.88
SHKBP1-222ENST00000600320 ACVRL1P37023 503 aa20.53■□□□□ 0.88
SHKBP1-222ENST00000600320 GNA12Q03113 381 aa20.53■□□□□ 0.88
SHKBP1-222ENST00000600320 PLEKHG6Q3KR16 790 aa20.53■□□□□ 0.88
SHKBP1-222ENST00000600320 PITRM1Q5JRX3 1037 aa20.53■□□□□ 0.88
SHKBP1-222ENST00000600320 AFMIDQ63HM1 303 aa20.53■□□□□ 0.88
SHKBP1-222ENST00000600320 KAZNQ674X7 775 aa20.53■□□□□ 0.88
SHKBP1-222ENST00000600320 TMCO3Q6UWJ1 677 aa20.53■□□□□ 0.88
SHKBP1-222ENST00000600320 ZNF852Q6ZMS4 543 aa20.53■□□□□ 0.88
SHKBP1-222ENST00000600320 ADIPOR2Q86V24 386 aa20.53■□□□□ 0.88
SHKBP1-222ENST00000600320 ARHGAP12Q8IWW6 846 aa20.53■□□□□ 0.88
SHKBP1-222ENST00000600320 UMODL1-AS1Q8N2C9 162 aa20.53■□□□□ 0.88
SHKBP1-222ENST00000600320 ZNF557Q8N988 423 aaPredicted RBP20.53■□□□□ 0.88
SHKBP1-222ENST00000600320 UBE2Q2Q8WVN8 375 aa20.53■□□□□ 0.88
SHKBP1-222ENST00000600320 FOXQ1Q9C009 403 aa20.53■□□□□ 0.88
SHKBP1-222ENST00000600320 SLC39A8Q9C0K1 460 aa20.53■□□□□ 0.88
SHKBP1-222ENST00000600320 TBC1D17Q9HA65 648 aa20.53■□□□□ 0.88
SHKBP1-222ENST00000600320 NDRG2Q9UN36 371 aaKnown RBP20.53■□□□□ 0.88
SHKBP1-222ENST00000600320 MTF2Q9Y483 593 aaPredicted RBP20.53■□□□□ 0.88
SHKBP1-222ENST00000600320 JRKLQ9Y4A0 524 aa20.53■□□□□ 0.88
SHKBP1-222ENST00000600320 A0A0A0MRY4 1105 aa20.52■□□□□ 0.88
SHKBP1-222ENST00000600320 K7EQS6 105 aa20.52■□□□□ 0.88
SHKBP1-222ENST00000600320 MFSD11O43934 449 aa20.52■□□□□ 0.88
SHKBP1-222ENST00000600320 RAMP2O60895 175 aa20.52■□□□□ 0.88
SHKBP1-222ENST00000600320 PDGFBP01127 241 aaPredicted RBP20.52■□□□□ 0.88
SHKBP1-222ENST00000600320 CHRM1P11229 460 aaPredicted RBP20.52■□□□□ 0.88
SHKBP1-222ENST00000600320 GRIA2P42262 883 aa20.52■□□□□ 0.88
SHKBP1-222ENST00000600320 PLK1P53350 603 aa20.52■□□□□ 0.88
SHKBP1-222ENST00000600320 PAFAH1B3Q15102 231 aaKnown RBP20.52■□□□□ 0.88
SHKBP1-222ENST00000600320 PPP2R5EQ16537 467 aa20.52■□□□□ 0.88
SHKBP1-222ENST00000600320 TFDP3Q5H9I0 405 aa20.52■□□□□ 0.88
SHKBP1-222ENST00000600320 MBLAC2Q68D91 279 aa20.52■□□□□ 0.88
SHKBP1-222ENST00000600320 SLC9A4Q6AI14 798 aa20.52■□□□□ 0.88
SHKBP1-222ENST00000600320 C1orf228Q6PIY5 440 aa20.52■□□□□ 0.88
SHKBP1-222ENST00000600320 TRIM67Q6ZTA4 783 aa20.52■□□□□ 0.88
SHKBP1-222ENST00000600320 AHI1Q8N157 1196 aa20.52■□□□□ 0.88
SHKBP1-222ENST00000600320 PLD5Q8N7P1 536 aa20.52■□□□□ 0.88
SHKBP1-222ENST00000600320 WFIKKN2Q8TEU8 576 aa20.52■□□□□ 0.88
SHKBP1-222ENST00000600320 ARHGEF2Q92974 986 aaKnown RBP20.52■□□□□ 0.88
SHKBP1-222ENST00000600320 FEM1AQ9BSK4 669 aa20.52■□□□□ 0.88
SHKBP1-222ENST00000600320 HEMGNQ9BXL5 484 aa20.52■□□□□ 0.88
SHKBP1-222ENST00000600320 OSBPL8Q9BZF1 889 aa20.52■□□□□ 0.88
SHKBP1-222ENST00000600320 LRRC19Q9H756 370 aa20.52■□□□□ 0.88
SHKBP1-222ENST00000600320 LTB4R2Q9NPC1 389 aa20.52■□□□□ 0.88
SHKBP1-222ENST00000600320 RBM12Q9NTZ6 932 aaKnown RBP20.52■□□□□ 0.88
SHKBP1-222ENST00000600320 HCN2Q9UL51 889 aa20.52■□□□□ 0.88
SHKBP1-222ENST00000600320 KANSL1LA0AUZ9 987 aa20.51■□□□□ 0.87
SHKBP1-222ENST00000600320 TBC1D3BA6NDS4 549 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms