RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 GPD2P43304 727 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 SYKP43405 635 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 SLC11A2P49281 568 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 STK19P49842 368 aaPredicted RBP6.32□□□□□ -1.4
VRK3-220ENST00000600259 PLK1P53350 603 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 SLC8A3P57103 927 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 TAS2R38P59533 333 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 ST8SIA6P61647 398 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 ECT2LQ008S8 904 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 SFSWAPQ12872 951 aaKnown RBP6.32□□□□□ -1.4
VRK3-220ENST00000600259 NNTQ13423 1086 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 TBC1D25Q3MII6 688 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 CDCP2Q5VXM1 449 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 SYPL2Q5VXT5 272 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 NAPEPLDQ6IQ20 393 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.32□□□□□ -1.4
VRK3-220ENST00000600259 KRBA2Q6ZNG9 492 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 LRRC69Q6ZNQ3 347 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 BEND5Q7L4P6 421 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 GPR155Q7Z3F1 870 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 IQCHQ86VS3 1027 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 MFN1Q8IWA4 741 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 SMYD4Q8IYR2 804 aaPredicted RBP6.32□□□□□ -1.4
VRK3-220ENST00000600259 SIX6OS1Q8N1H7 587 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 CARNMT1Q8N4J0 409 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 ZNF557Q8N988 423 aaPredicted RBP6.32□□□□□ -1.4
VRK3-220ENST00000600259 HJURPQ8NCD3 748 aaPredicted RBP6.32□□□□□ -1.4
VRK3-220ENST00000600259 OR52K2Q8NGK3 314 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 OR14C36Q8NHC7 312 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 DQX1Q8TE96 717 aaKnown RBP6.32□□□□□ -1.4
VRK3-220ENST00000600259 KAT5Q92993 513 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 SLC35C1Q96A29 364 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 SKA1Q96BD8 255 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 SERAC1Q96JX3 654 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 RPL10LQ96L21 214 aaKnown RBP6.32□□□□□ -1.4
VRK3-220ENST00000600259 HSFY1Q96LI6 401 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 FCRL3Q96P31 734 aaPredicted RBP6.32□□□□□ -1.4
VRK3-220ENST00000600259 PRMT1Q99873 361 aaKnown RBP6.32□□□□□ -1.4
VRK3-220ENST00000600259 OMDQ99983 421 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 KDM4CQ9H3R0 1056 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 AASDHPPTQ9NRN7 309 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 HESX1Q9UBX0 185 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 TPX2Q9ULW0 747 aaKnown RBP6.32□□□□□ -1.4
VRK3-220ENST00000600259 NAALADL1Q9UQQ1 740 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 TLR6Q9Y2C9 796 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 OR51B4Q9Y5P0 310 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 MYO18BQ8IUG5 2567 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 COL6A6A6NMZ7 2263 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 PLXNA2O75051 1894 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 TBC1D3DA0A087WVF3 549 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 TBC1D3IA0A087WXS9 549 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 TBC1D3EA0A087X179 549 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 TBC1D3KA0A087X1G2 549 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 LY6G6EA0A0G2JKS1 128 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 A0A1W2PNU3 283 aaPredicted RBP6.31□□□□□ -1.4
VRK3-220ENST00000600259 TBC1D3FA6NER0 549 aaPredicted RBP6.31□□□□□ -1.4
VRK3-220ENST00000600259 KCNU1A8MYU2 1149 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 TBC1D3LB9A6J9 549 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 RNF103O00237 685 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 CETN3O15182 167 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 PMM2O15305 246 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 RRP8O43159 456 aaKnown RBP6.31□□□□□ -1.4
VRK3-220ENST00000600259 PLRG1O43660 514 aaKnown RBP6.31□□□□□ -1.4
VRK3-220ENST00000600259 SIGLEC6O43699 453 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 ATP9BO43861 1147 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 STX10O60499 249 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 RTN2O75298 545 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 DXOO77932 396 aaKnown RBP6.31□□□□□ -1.4
VRK3-220ENST00000600259 ADH1BP00325 375 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 MT-CO3P00414 261 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 TBC1D3HP0C7X1 549 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 GLDCP23378 1020 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 DGKAP23743 735 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 BRD2P25440 801 aaKnown RBP6.31□□□□□ -1.4
VRK3-220ENST00000600259 PRCPP42785 496 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 PSMD8P48556 350 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 ARRB1P49407 418 aaPredicted RBP6.31□□□□□ -1.4
VRK3-220ENST00000600259 PMS1P54277 932 aaKnown RBP6.31□□□□□ -1.4
VRK3-220ENST00000600259 PITX1P78337 314 aaPredicted RBP6.31□□□□□ -1.4
VRK3-220ENST00000600259 E2F1Q01094 437 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 CFHR1Q03591 330 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 KCNH2Q12809 1159 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 OVGP1Q12889 678 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 LRMPQ12912 555 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 ZNF211Q13398 564 aaPredicted RBP6.31□□□□□ -1.4
VRK3-220ENST00000600259 COBLL1Q53SF7 1204 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 ZC3H12AQ5D1E8 599 aaKnown RBP6.31□□□□□ -1.4
VRK3-220ENST00000600259 ARTNQ5T4W7 220 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 AGBL4Q5VU57 503 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 ANKRD40Q6AI12 368 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 TBC1D3GQ6DHY5 549 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 TBC1D3CQ6IPX1 549 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 CXorf57Q6NSI4 855 aaKnown RBP6.31□□□□□ -1.4
VRK3-220ENST00000600259 ZNF605Q86T29 641 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 PRPF39Q86UA1 669 aaKnown RBP6.31□□□□□ -1.4
VRK3-220ENST00000600259 TAC4Q86UU9 113 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 TRIM69Q86WT6 500 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 TBC1D3Q8IZP1 549 aaPredicted RBP6.31□□□□□ -1.4
VRK3-220ENST00000600259 LGI2Q8N0V4 545 aa6.31□□□□□ -1.4
VRK3-220ENST00000600259 OXR1Q8N573 874 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms