RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 TPX2Q9ULW0 747 aaKnown RBP24.69■■□□□ 1.54
LSM4-202ENST00000593564 NBEAQ8NFP9 2946 aa24.68■■□□□ 1.54
LSM4-202ENST00000593564 GLI1P08151 1106 aa24.68■■□□□ 1.54
LSM4-202ENST00000593564 SLC2A3P11169 496 aa24.68■■□□□ 1.54
LSM4-202ENST00000593564 MZF1P28698 734 aaPredicted RBP24.68■■□□□ 1.54
LSM4-202ENST00000593564 NNMTP40261 264 aa24.68■■□□□ 1.54
LSM4-202ENST00000593564 STK19P49842 368 aaPredicted RBP24.68■■□□□ 1.54
LSM4-202ENST00000593564 ADPRHP54922 357 aa24.68■■□□□ 1.54
LSM4-202ENST00000593564 IL9RQ01113 521 aa24.68■■□□□ 1.54
LSM4-202ENST00000593564 SULT2A1Q06520 285 aa24.68■■□□□ 1.54
LSM4-202ENST00000593564 ELAVL3Q14576 367 aaKnown RBP24.68■■□□□ 1.54
LSM4-202ENST00000593564 TRIM65Q6PJ69 517 aa24.68■■□□□ 1.54
LSM4-202ENST00000593564 CCAR2Q8N163 923 aaKnown RBP24.68■■□□□ 1.54
LSM4-202ENST00000593564 MDM1Q8TC05 714 aa24.68■■□□□ 1.54
LSM4-202ENST00000593564 SLC2A13Q96QE2 648 aa24.68■■□□□ 1.54
LSM4-202ENST00000593564 ELF4Q99607 663 aaPredicted RBP24.68■■□□□ 1.54
LSM4-202ENST00000593564 FAM204AQ9H8W3 233 aa24.68■■□□□ 1.54
LSM4-202ENST00000593564 A0A1B0GVM2 712 aa24.67■■□□□ 1.54
LSM4-202ENST00000593564 TCAF2A6NFQ2 919 aa24.67■■□□□ 1.54
LSM4-202ENST00000593564 BECN2A8MW95 431 aa24.67■■□□□ 1.54
LSM4-202ENST00000593564 WNT1P04628 370 aa24.67■■□□□ 1.54
LSM4-202ENST00000593564 HOXB3P14651 431 aaPredicted RBP24.67■■□□□ 1.54
LSM4-202ENST00000593564 PDGFRAP16234 1089 aa24.67■■□□□ 1.54
LSM4-202ENST00000593564 ABCB4P21439 1286 aa24.67■■□□□ 1.54
LSM4-202ENST00000593564 PLK1P53350 603 aa24.67■■□□□ 1.54
LSM4-202ENST00000593564 OXCT1P55809 520 aa24.67■■□□□ 1.54
LSM4-202ENST00000593564 CDK17Q00537 523 aa24.67■■□□□ 1.54
LSM4-202ENST00000593564 RABGAP1LQ5R372 815 aa24.67■■□□□ 1.54
LSM4-202ENST00000593564 GJB7Q6PEY0 223 aa24.67■■□□□ 1.54
LSM4-202ENST00000593564 OR14C36Q8NHC7 312 aa24.67■■□□□ 1.54
LSM4-202ENST00000593564 CRACR2AQ9BSW2 395 aa24.67■■□□□ 1.54
LSM4-202ENST00000593564 AASDHPPTQ9NRN7 309 aa24.67■■□□□ 1.54
LSM4-202ENST00000593564 ASNSD1Q9NWL6 643 aa24.67■■□□□ 1.54
LSM4-202ENST00000593564 DKK4Q9UBT3 224 aa24.67■■□□□ 1.54
LSM4-202ENST00000593564 FTSJ1Q9UET6 329 aa24.67■■□□□ 1.54
LSM4-202ENST00000593564 PLXNA2O75051 1894 aa24.66■■□□□ 1.54
LSM4-202ENST00000593564 A0A1W2PR77 199 aa24.66■■□□□ 1.54
LSM4-202ENST00000593564 CD38P28907 300 aa24.66■■□□□ 1.54
LSM4-202ENST00000593564 CCR1P32246 355 aa24.66■■□□□ 1.54
LSM4-202ENST00000593564 SMAD1Q15797 465 aaKnown RBP24.66■■□□□ 1.54
LSM4-202ENST00000593564 CXorf57Q6NSI4 855 aaKnown RBP24.66■■□□□ 1.54
LSM4-202ENST00000593564 CIR1Q86X95 450 aaPredicted RBP24.66■■□□□ 1.54
LSM4-202ENST00000593564 DEFB106AQ8N104 65 aa24.66■■□□□ 1.54
LSM4-202ENST00000593564 SPAG5Q96R06 1193 aa24.66■■□□□ 1.54
LSM4-202ENST00000593564 DDIT4Q9NX09 232 aa24.66■■□□□ 1.54
LSM4-202ENST00000593564 APEX2Q9UBZ4 518 aa24.66■■□□□ 1.54
LSM4-202ENST00000593564 CELSR3Q9NYQ7 3312 aa24.66■■□□□ 1.54
LSM4-202ENST00000593564 GOLGA4Q13439 2230 aaKnown RBP24.65■■□□□ 1.54
LSM4-202ENST00000593564 HSF2BPO75031 334 aa24.65■■□□□ 1.54
LSM4-202ENST00000593564 GADD45BO75293 160 aaPredicted RBP24.65■■□□□ 1.54
LSM4-202ENST00000593564 IL1BP01584 269 aa24.65■■□□□ 1.54
LSM4-202ENST00000593564 VASPP50552 380 aaPredicted RBP24.65■■□□□ 1.54
LSM4-202ENST00000593564 ARHGAP44Q17R89 818 aa24.65■■□□□ 1.54
LSM4-202ENST00000593564 EFHC1Q5JVL4 640 aa24.65■■□□□ 1.54
LSM4-202ENST00000593564 SMYD5Q6GMV2 418 aa24.65■■□□□ 1.54
LSM4-202ENST00000593564 WDTC1Q8N5D0 677 aa24.65■■□□□ 1.54
LSM4-202ENST00000593564 FRS2Q8WU20 508 aa24.65■■□□□ 1.54
LSM4-202ENST00000593564 SHC3Q92529 594 aa24.65■■□□□ 1.54
LSM4-202ENST00000593564 FAM131CQ96AQ9 280 aa24.65■■□□□ 1.54
LSM4-202ENST00000593564 PPP1R13BQ96KQ4 1090 aa24.65■■□□□ 1.54
LSM4-202ENST00000593564 CPXM1Q96SM3 734 aa24.65■■□□□ 1.54
LSM4-202ENST00000593564 RWDD2AQ9UIY3 292 aa24.65■■□□□ 1.54
LSM4-202ENST00000593564 WNT9AO14904 365 aa24.64■■□□□ 1.54
LSM4-202ENST00000593564 YKT6O15498 198 aa24.64■■□□□ 1.54
LSM4-202ENST00000593564 LATO43561 262 aa24.64■■□□□ 1.54
LSM4-202ENST00000593564 VAV1P15498 845 aa24.64■■□□□ 1.54
LSM4-202ENST00000593564 SLC9A1P19634 815 aa24.64■■□□□ 1.54
LSM4-202ENST00000593564 DRD3P35462 400 aa24.64■■□□□ 1.54
LSM4-202ENST00000593564 USP8P40818 1118 aa24.64■■□□□ 1.54
LSM4-202ENST00000593564 MTA1Q13330 715 aa24.64■■□□□ 1.54
LSM4-202ENST00000593564 CAMK2BQ13554 666 aa24.64■■□□□ 1.54
LSM4-202ENST00000593564 PRAMEF14Q5SWL7 426 aa24.64■■□□□ 1.54
LSM4-202ENST00000593564 FBXL22Q6P050 247 aa24.64■■□□□ 1.54
LSM4-202ENST00000593564 GBP6Q6ZN66 633 aa24.64■■□□□ 1.54
LSM4-202ENST00000593564 RNF34Q969K3 372 aa24.64■■□□□ 1.54
LSM4-202ENST00000593564 SERAC1Q96JX3 654 aa24.64■■□□□ 1.54
LSM4-202ENST00000593564 PPP1R9BQ96SB3 815 aa24.64■■□□□ 1.54
LSM4-202ENST00000593564 GDF3Q9NR23 364 aa24.64■■□□□ 1.54
LSM4-202ENST00000593564 PCDHGC3Q9UN70 934 aa24.64■■□□□ 1.54
LSM4-202ENST00000593564 SYNJ2BP-COX16A0A087WUM0 186 aa24.63■■□□□ 1.53
LSM4-202ENST00000593564 NUMBP49757 651 aa24.63■■□□□ 1.53
LSM4-202ENST00000593564 SHBQ15464 509 aa24.63■■□□□ 1.53
LSM4-202ENST00000593564 DSG4Q86SJ6 1040 aa24.63■■□□□ 1.53
LSM4-202ENST00000593564 MARCH9Q86YJ5 346 aa24.63■■□□□ 1.53
LSM4-202ENST00000593564 GATAD2AQ86YP4 633 aa24.63■■□□□ 1.53
LSM4-202ENST00000593564 SAP25Q8TEE9 199 aa24.63■■□□□ 1.53
LSM4-202ENST00000593564 ALG14Q96F25 216 aa24.63■■□□□ 1.53
LSM4-202ENST00000593564 RPRD1AQ96P16 312 aaPredicted RBP24.63■■□□□ 1.53
LSM4-202ENST00000593564 NOX5Q96PH1 765 aa24.63■■□□□ 1.53
LSM4-202ENST00000593564 KDM4CQ9H3R0 1056 aa24.63■■□□□ 1.53
LSM4-202ENST00000593564 COX16Q9P0S2 106 aa24.63■■□□□ 1.53
LSM4-202ENST00000593564 RAXQ9Y2V3 346 aa24.63■■□□□ 1.53
LSM4-202ENST00000593564 PCDHGA1Q9Y5H4 931 aa24.63■■□□□ 1.53
LSM4-202ENST00000593564 COL5A1P20908 1838 aaPredicted RBP24.63■■□□□ 1.53
LSM4-202ENST00000593564 BAHCC1Q9P281 2608 aa24.63■■□□□ 1.53
LSM4-202ENST00000593564 NYNRINQ9P2P1 1898 aaKnown RBP24.62■■□□□ 1.53
LSM4-202ENST00000593564 GTPBP10A4D1E9 387 aaKnown RBP24.62■■□□□ 1.53
LSM4-202ENST00000593564 SLC7A4O43246 635 aa24.62■■□□□ 1.53
LSM4-202ENST00000593564 NXPH1P58417 271 aa24.62■■□□□ 1.53
LSM4-202ENST00000593564 PPP2CBP62714 309 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms