RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 DLL3Q9NYJ7 618 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 WSB2Q9NYS7 404 aaPredicted RBP12.44□□□□□ -0.42
TPM4-212ENST00000590180 CNOT1A5YKK6 2376 aaKnown RBP12.44□□□□□ -0.42
TPM4-212ENST00000590180 ATXN2Q99700 1313 aaKnown RBP12.43□□□□□ -0.42
TPM4-212ENST00000590180 ANKRD62A6NC57 917 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 C2CD4BA6NLJ0 364 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 SIGLEC16A6NMB1 481 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 DRGXA6NNA5 263 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 I6L893 689 aaPredicted RBP12.43□□□□□ -0.42
TPM4-212ENST00000590180 SIN3BO75182 1162 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 ENDOD1O94919 500 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 RHOCP08134 193 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 SKILP12757 684 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 GPD1P21695 349 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 ADRA1BP35368 520 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 DPP6P42658 865 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 STK19P49842 368 aaPredicted RBP12.43□□□□□ -0.42
TPM4-212ENST00000590180 RPS14P62263 151 aaKnown RBP12.43□□□□□ -0.42
TPM4-212ENST00000590180 C1QBPQ07021 282 aaKnown RBP12.43□□□□□ -0.42
TPM4-212ENST00000590180 HNRNPA1L2Q32P51 320 aaKnown RBP12.43□□□□□ -0.42
TPM4-212ENST00000590180 C5orf22Q49AR2 442 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 ACCSLQ4AC99 568 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 RAB6CQ53S08 254 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 ALFQ53S48 1182 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 TRIM61Q5EBN2 209 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 SYCP2LQ5T4T6 812 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 ACBD5Q5T8D3 534 aaPredicted RBP12.43□□□□□ -0.42
TPM4-212ENST00000590180 IL31Q6EBC2 164 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 CXorf57Q6NSI4 855 aaKnown RBP12.43□□□□□ -0.42
TPM4-212ENST00000590180 DNAJC24Q6P3W2 148 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 SCYL2Q6P3W7 929 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 DCUN1D2Q6PH85 259 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 KDM1BQ8NB78 822 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 FOXJ1Q92949 421 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 MYO19Q96H55 970 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 ZNF419Q96HQ0 510 aaPredicted RBP12.43□□□□□ -0.42
TPM4-212ENST00000590180 HSPA12BQ96MM6 686 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 FEM1AQ9BSK4 669 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 RTKNQ9BST9 563 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 RAB6CQ9H0N0 254 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 HAUS4Q9H6D7 363 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 FBRSQ9HAH7 460 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 AIPL1Q9NZN9 384 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 MPP6Q9NZW5 540 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 USP36Q9P275 1121 aaKnown RBP12.43□□□□□ -0.42
TPM4-212ENST00000590180 VPS28Q9UK41 221 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 PILRBQ9UKJ0 227 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 NCKAP1Q9Y2A7 1128 aa12.43□□□□□ -0.42
TPM4-212ENST00000590180 EDDM13A0A1B0GTR0 161 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 TARSL2A2RTX5 802 aaKnown RBP12.42□□□□□ -0.42
TPM4-212ENST00000590180 MEI4A8MW99 385 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 E9PAM4 449 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 SLC30A4O14863 429 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 CFIP05156 583 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 MAOBP27338 520 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 OR1E1P30953 314 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 PTPN9P43378 593 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 KRT83P78385 493 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 KLHL30Q0D2K2 578 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 DUOXA1Q1HG43 343 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 WDR45BQ5MNZ6 344 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 C9orf64Q5T6V5 341 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 STPG1Q5TH74 334 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 ZNF776Q68DI1 518 aaPredicted RBP12.42□□□□□ -0.42
TPM4-212ENST00000590180 MON1BQ7L1V2 547 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 STRADAQ7RTN6 431 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 BNIPLQ7Z465 357 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 TFAP2DQ7Z6R9 452 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 MMAAQ8IVH4 418 aaKnown RBP12.42□□□□□ -0.42
TPM4-212ENST00000590180 SLC41A1Q8IVJ1 513 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 MCOLN2Q8IZK6 566 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 C3orf20Q8ND61 904 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 OR52K2Q8NGK3 314 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 CEP76Q8TAP6 659 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 FAM172AQ8WUF8 416 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 SPON2Q9BUD6 331 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 NUSAP1Q9BXS6 441 aaKnown RBP12.42□□□□□ -0.42
TPM4-212ENST00000590180 MIR1-1HGQ9H1L0 117 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 TAS2R14Q9NYV8 317 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 IFNKQ9P0W0 207 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 OR12D3Q9UGF7 316 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 SLC25A13Q9UJS0 675 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 TBC1D30Q9Y2I9 924 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 FRYLO94915 3013 aa12.42□□□□□ -0.42
TPM4-212ENST00000590180 PI4KAP42356 2102 aa12.41□□□□□ -0.42
TPM4-212ENST00000590180 C4orf47A7E2U8 309 aa12.41□□□□□ -0.42
TPM4-212ENST00000590180 BNIP3LO60238 219 aa12.41□□□□□ -0.42
TPM4-212ENST00000590180 FTLP02792 175 aaPredicted RBP12.41□□□□□ -0.42
TPM4-212ENST00000590180 RRM1P23921 792 aa12.41□□□□□ -0.42
TPM4-212ENST00000590180 ZBTB16Q05516 673 aa12.41□□□□□ -0.42
TPM4-212ENST00000590180 SFSWAPQ12872 951 aaKnown RBP12.41□□□□□ -0.42
TPM4-212ENST00000590180 TTC31Q49AM3 519 aaPredicted RBP12.41□□□□□ -0.42
TPM4-212ENST00000590180 C6orf118Q5T5N4 469 aa12.41□□□□□ -0.42
TPM4-212ENST00000590180 DCAF12L1Q5VU92 463 aa12.41□□□□□ -0.42
TPM4-212ENST00000590180 RWDD4Q6NW29 188 aaKnown RBP12.41□□□□□ -0.42
TPM4-212ENST00000590180 PPP1R2P3Q6NXS1 205 aa12.41□□□□□ -0.42
TPM4-212ENST00000590180 ERMP1Q7Z2K6 904 aa12.41□□□□□ -0.42
TPM4-212ENST00000590180 ZNF571Q7Z3V5 609 aaPredicted RBP12.41□□□□□ -0.42
TPM4-212ENST00000590180 SETD3Q86TU7 594 aaPredicted RBP12.41□□□□□ -0.42
TPM4-212ENST00000590180 DNAAF5Q86Y56 855 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms