RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 COL4A3Q01955 1670 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 TBC1D3BA6NDS4 549 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 ENC1O14682 589 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 APOL1O14791 398 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 DCLK1O15075 740 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 RAMP2O60895 175 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 KAT7O95251 611 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 PYGMP11217 842 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 ALADP13716 330 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 HLA-FP30511 346 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 CD70P32970 193 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 CSKP41240 450 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 GRIA2P42262 883 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 GNA12Q03113 381 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 SIGLEC14Q08ET2 396 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 ZNF211Q13398 564 aaPredicted RBP13.98□□□□□ -0.17
VMP1-210ENST00000589823 PPP2R5EQ16537 467 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 FSCBQ5H9T9 825 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 NAIF1Q69YI7 327 aaPredicted RBP13.98□□□□□ -0.17
VMP1-210ENST00000589823 ASTLQ6HA08 431 aaPredicted RBP13.98□□□□□ -0.17
VMP1-210ENST00000589823 TXNDC11Q6PKC3 985 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 ZNF783Q6ZMS7 281 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 ZSCAN30Q86W11 494 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 ZNF354CQ86Y25 554 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 AHI1Q8N157 1196 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 UMODL1-AS1Q8N2C9 162 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.98□□□□□ -0.17
VMP1-210ENST00000589823 TERB1Q8NA31 727 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 EDAQ92838 391 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 PSMB7Q99436 277 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 MAGEH1Q9H213 219 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 CARD9Q9H257 536 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 NDFIP2Q9NV92 336 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 ETNK2Q9NVF9 386 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 ZNF212Q9UDV6 495 aa13.98□□□□□ -0.17
VMP1-210ENST00000589823 MYOFQ9NZM1 2061 aa13.97□□□□□ -0.17
VMP1-210ENST00000589823 hCG_1818297A0A087WSY0 165 aa13.97□□□□□ -0.17
VMP1-210ENST00000589823 KRBA1A5PL33 1030 aa13.97□□□□□ -0.17
VMP1-210ENST00000589823 STK25O00506 426 aa13.97□□□□□ -0.17
VMP1-210ENST00000589823 TRIM24O15164 1050 aa13.97□□□□□ -0.17
VMP1-210ENST00000589823 KRT10P13645 584 aa13.97□□□□□ -0.17
VMP1-210ENST00000589823 DRD1P21728 446 aa13.97□□□□□ -0.17
VMP1-210ENST00000589823 PTPN7P35236 360 aa13.97□□□□□ -0.17
VMP1-210ENST00000589823 NDST2P52849 883 aa13.97□□□□□ -0.17
VMP1-210ENST00000589823 YBEYP58557 167 aaPredicted RBP13.97□□□□□ -0.17
VMP1-210ENST00000589823 STARD6P59095 220 aa13.97□□□□□ -0.17
VMP1-210ENST00000589823 DYNLT1P63172 113 aa13.97□□□□□ -0.17
VMP1-210ENST00000589823 DMC1Q14565 340 aa13.97□□□□□ -0.17
VMP1-210ENST00000589823 POLD3Q15054 466 aaPredicted RBP13.97□□□□□ -0.17
VMP1-210ENST00000589823 LLGL1Q15334 1064 aa13.97□□□□□ -0.17
VMP1-210ENST00000589823 TAZQ16635 292 aa13.97□□□□□ -0.17
VMP1-210ENST00000589823 GEN1Q17RS7 908 aa13.97□□□□□ -0.17
VMP1-210ENST00000589823 PARP15Q460N3 678 aa13.97□□□□□ -0.17
VMP1-210ENST00000589823 TMEM196Q5HYL7 178 aa13.97□□□□□ -0.17
VMP1-210ENST00000589823 KIAA0907Q7Z7F0 614 aaPredicted RBP13.97□□□□□ -0.17
VMP1-210ENST00000589823 PHTF2Q8N3S3 785 aa13.97□□□□□ -0.17
VMP1-210ENST00000589823 PQLC3Q8N755 202 aa13.97□□□□□ -0.17
VMP1-210ENST00000589823 NAPGQ99747 312 aaPredicted RBP13.97□□□□□ -0.17
VMP1-210ENST00000589823 SPON2Q9BUD6 331 aa13.97□□□□□ -0.17
VMP1-210ENST00000589823 HEMGNQ9BXL5 484 aa13.97□□□□□ -0.17
VMP1-210ENST00000589823 OSBPL8Q9BZF1 889 aa13.97□□□□□ -0.17
VMP1-210ENST00000589823 VPS28Q9UK41 221 aa13.97□□□□□ -0.17
VMP1-210ENST00000589823 NDRG2Q9UN36 371 aaKnown RBP13.97□□□□□ -0.17
VMP1-210ENST00000589823 EFR3BQ9Y2G0 817 aa13.97□□□□□ -0.17
VMP1-210ENST00000589823 CTAGE9A4FU28 777 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 ARHGAP42A6NI28 874 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 RASA4BC9J798 803 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 RASA4O43374 803 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 TIMM44O43615 452 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 CST8O60676 142 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 TJP3O95049 919 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 ATP1A1P05023 1023 aaKnown RBP13.96□□□□□ -0.17
VMP1-210ENST00000589823 POLR2EP19388 210 aaKnown RBP13.96□□□□□ -0.17
VMP1-210ENST00000589823 CD72P21854 359 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 MZF1P28698 734 aaPredicted RBP13.96□□□□□ -0.17
VMP1-210ENST00000589823 TNFRSF4P43489 277 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 PLK1P53350 603 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 ETF1P62495 437 aaKnown RBP13.96□□□□□ -0.17
VMP1-210ENST00000589823 EIF4HQ15056 248 aaKnown RBP13.96□□□□□ -0.17
VMP1-210ENST00000589823 PAFAH1B3Q15102 231 aaKnown RBP13.96□□□□□ -0.17
VMP1-210ENST00000589823 E2F5Q15329 346 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 PLEKHG6Q3KR16 790 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 PITRM1Q5JRX3 1037 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 CCDC181Q5TID7 509 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 DCAF12L1Q5VU92 463 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 MBLAC2Q68D91 279 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 NCBP2-AS2Q69YL0 99 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 SLC9A4Q6AI14 798 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 IL31Q6EBC2 164 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 AADACL2Q6P093 401 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 OR7D4Q8NG98 312 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 OR52K2Q8NGK3 314 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 UCMAQ8WVF2 138 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 CELF6Q96J87 481 aaKnown RBP13.96□□□□□ -0.17
VMP1-210ENST00000589823 PBKQ96KB5 322 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 LMLNQ96KR4 655 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 C16orf45Q96MC5 204 aaPredicted RBP13.96□□□□□ -0.17
VMP1-210ENST00000589823 WDR24Q96S15 920 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 NELL2Q99435 816 aa13.96□□□□□ -0.17
VMP1-210ENST00000589823 FEM1AQ9BSK4 669 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms