RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 PNLIPP16233 465 aa8.69□□□□□ -1.02
DNMT1-219ENST00000589349 ARL4AP40617 200 aa8.69□□□□□ -1.02
DNMT1-219ENST00000589349 CXCL12P48061 93 aa8.69□□□□□ -1.02
DNMT1-219ENST00000589349 CCR3P51677 355 aa8.69□□□□□ -1.02
DNMT1-219ENST00000589349 NDST1P52848 882 aa8.69□□□□□ -1.02
DNMT1-219ENST00000589349 MAP3K7CLP57077 242 aa8.69□□□□□ -1.02
DNMT1-219ENST00000589349 FCHO2Q0JRZ9 810 aa8.69□□□□□ -1.02
DNMT1-219ENST00000589349 TAF10Q12962 218 aa8.69□□□□□ -1.02
DNMT1-219ENST00000589349 LAPTM5Q13571 262 aa8.69□□□□□ -1.02
DNMT1-219ENST00000589349 RUNX3Q13761 415 aa8.69□□□□□ -1.02
DNMT1-219ENST00000589349 MTF1Q14872 753 aa8.69□□□□□ -1.02
DNMT1-219ENST00000589349 PDGFRLQ15198 375 aa8.69□□□□□ -1.02
DNMT1-219ENST00000589349 TMEM150AQ86TG1 271 aa8.69□□□□□ -1.02
DNMT1-219ENST00000589349 RALGPS2Q86X27 583 aaPredicted RBP8.69□□□□□ -1.02
DNMT1-219ENST00000589349 NUP93Q8N1F7 819 aa8.69□□□□□ -1.02
DNMT1-219ENST00000589349 GUF1Q8N442 669 aaKnown RBP8.69□□□□□ -1.02
DNMT1-219ENST00000589349 TMEM52Q8NDY8 209 aa8.69□□□□□ -1.02
DNMT1-219ENST00000589349 SPATA17Q96L03 361 aa8.69□□□□□ -1.02
DNMT1-219ENST00000589349 KCNK16Q96T55 309 aa8.69□□□□□ -1.02
DNMT1-219ENST00000589349 DDX23Q9BUQ8 820 aaKnown RBP8.69□□□□□ -1.02
DNMT1-219ENST00000589349 KIF9Q9HAQ2 790 aa8.69□□□□□ -1.02
DNMT1-219ENST00000589349 TRPV5Q9NQA5 729 aa8.69□□□□□ -1.02
DNMT1-219ENST00000589349 DMAC2Q9NW81 257 aa8.69□□□□□ -1.02
DNMT1-219ENST00000589349 OBP2AQ9NY56 170 aa8.69□□□□□ -1.02
DNMT1-219ENST00000589349 DLGAP2Q9P1A6 1054 aa8.69□□□□□ -1.02
DNMT1-219ENST00000589349 SLC8A2Q9UPR5 921 aa8.69□□□□□ -1.02
DNMT1-219ENST00000589349 TRAF3IP3Q9Y228 551 aa8.69□□□□□ -1.02
DNMT1-219ENST00000589349 NCANO14594 1321 aa8.69□□□□□ -1.02
DNMT1-219ENST00000589349 COL4A3Q01955 1670 aa8.69□□□□□ -1.02
DNMT1-219ENST00000589349 TRBV23OR9-2A0A075B6M9 112 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 IKBKBO14920 756 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 RTN3O95197 1032 aaPredicted RBP8.68□□□□□ -1.02
DNMT1-219ENST00000589349 VNN1O95497 513 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 FAM163BP0C2L3 166 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 FAM200BP0CF97 657 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 IRF1P10914 325 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 PRCPP42785 496 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 RPS9P46781 194 aaKnown RBP8.68□□□□□ -1.02
DNMT1-219ENST00000589349 NOP14P78316 857 aaKnown RBP8.68□□□□□ -1.02
DNMT1-219ENST00000589349 LRMPQ12912 555 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 ZACNQ401N2 412 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 CCDC40Q4G0X9 1142 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 DGKKQ5KSL6 1271 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 ZNF658Q5TYW1 1059 aaPredicted RBP8.68□□□□□ -1.02
DNMT1-219ENST00000589349 CEP68Q76N32 757 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 TRIM59Q8IWR1 403 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 KIAA2013Q8IYS2 634 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 C12orf29Q8N999 325 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 FBXO15Q8NCQ5 510 aaPredicted RBP8.68□□□□□ -1.02
DNMT1-219ENST00000589349 SCAMP5Q8TAC9 235 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 SLC2A14Q8TDB8 520 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 TAS1R2Q8TE23 839 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 TAF4BQ92750 862 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 ATP2A3Q93084 1043 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 CLDN23Q96B33 292 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 TRMT2BQ96GJ1 504 aaKnown RBP8.68□□□□□ -1.02
DNMT1-219ENST00000589349 SMARCD1Q96GM5 515 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 MSANTD3Q96H12 275 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 C8orf48Q96LL4 319 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 JMJD8Q96S16 334 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 SLC22A12Q96S37 553 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 PKMYT1Q99640 499 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 PLCD4Q9BRC7 762 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 MCMBPQ9BTE3 642 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 XYLT2Q9H1B5 865 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 SEMA4AQ9H3S1 761 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 DMAP1Q9NPF5 467 aaPredicted RBP8.68□□□□□ -1.02
DNMT1-219ENST00000589349 ZSCAN32Q9NX65 697 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 CFAP97Q9P2B7 532 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 FBXO4Q9UKT5 387 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 SH3BP1Q9Y3L3 701 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 PCDHA5Q9Y5H7 936 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 CPQQ9Y646 472 aa8.68□□□□□ -1.02
DNMT1-219ENST00000589349 FAM237AA0A1B0GTK4 181 aa8.67□□□□□ -1.02
DNMT1-219ENST00000589349 ZNF840PA6NDX5 716 aa8.67□□□□□ -1.02
DNMT1-219ENST00000589349 AGRPO00253 132 aa8.67□□□□□ -1.02
DNMT1-219ENST00000589349 LEFTY2O00292 366 aa8.67□□□□□ -1.02
DNMT1-219ENST00000589349 PSMA7O14818 248 aa8.67□□□□□ -1.02
DNMT1-219ENST00000589349 TRIOO75962 3097 aa8.67□□□□□ -1.02
DNMT1-219ENST00000589349 CHRNB1P11230 501 aa8.67□□□□□ -1.02
DNMT1-219ENST00000589349 PRKCAP17252 672 aa8.67□□□□□ -1.02
DNMT1-219ENST00000589349 PPP3CCP48454 512 aa8.67□□□□□ -1.02
DNMT1-219ENST00000589349 FNTBP49356 437 aa8.67□□□□□ -1.02
DNMT1-219ENST00000589349 MXI1P50539 228 aa8.67□□□□□ -1.02
DNMT1-219ENST00000589349 CACNA2D1P54289 1103 aa8.67□□□□□ -1.02
DNMT1-219ENST00000589349 SLC8A3P57103 927 aa8.67□□□□□ -1.02
DNMT1-219ENST00000589349 SATB1Q01826 763 aa8.67□□□□□ -1.02
DNMT1-219ENST00000589349 PPP3CAQ08209 521 aa8.67□□□□□ -1.02
DNMT1-219ENST00000589349 HECTD3Q5T447 861 aa8.67□□□□□ -1.02
DNMT1-219ENST00000589349 KRT39Q6A163 491 aa8.67□□□□□ -1.02
DNMT1-219ENST00000589349 ANKRD40Q6AI12 368 aa8.67□□□□□ -1.02
DNMT1-219ENST00000589349 MRM1Q6IN84 353 aaKnown RBP8.67□□□□□ -1.02
DNMT1-219ENST00000589349 Q6ZS52 159 aa8.67□□□□□ -1.02
DNMT1-219ENST00000589349 CELF2-AS1Q8N7Q2 184 aa8.67□□□□□ -1.02
DNMT1-219ENST00000589349 NUP43Q8NFH3 380 aa8.67□□□□□ -1.02
DNMT1-219ENST00000589349 OSCP1Q8WVF1 389 aa8.67□□□□□ -1.02
DNMT1-219ENST00000589349 CYFIP2Q96F07 1278 aa8.67□□□□□ -1.02
DNMT1-219ENST00000589349 GSDMAQ96QA5 445 aa8.67□□□□□ -1.02
DNMT1-219ENST00000589349 P2RY13Q9BPV8 354 aa8.67□□□□□ -1.02
DNMT1-219ENST00000589349 SDCBP2Q9H190 292 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms