RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 MYZAPP0CAP1 466 aa12.37□□□□□ -0.43
CCBE1-203ENST00000589116 CCNCP24863 283 aa12.37□□□□□ -0.43
CCBE1-203ENST00000589116 SLC11A2P49281 568 aa12.37□□□□□ -0.43
CCBE1-203ENST00000589116 PARP6Q2NL67 630 aa12.37□□□□□ -0.43
CCBE1-203ENST00000589116 C5orf22Q49AR2 442 aa12.37□□□□□ -0.43
CCBE1-203ENST00000589116 PLPP4Q5VZY2 271 aa12.37□□□□□ -0.43
CCBE1-203ENST00000589116 RAP1GAP2Q684P5 730 aa12.37□□□□□ -0.43
CCBE1-203ENST00000589116 TIGD7Q6NT04 549 aaPredicted RBP12.37□□□□□ -0.43
CCBE1-203ENST00000589116 FBXL22Q6P050 247 aa12.37□□□□□ -0.43
CCBE1-203ENST00000589116 TMEM150AQ86TG1 271 aa12.37□□□□□ -0.43
CCBE1-203ENST00000589116 CHSY1Q86X52 802 aa12.37□□□□□ -0.43
CCBE1-203ENST00000589116 TP53INP2Q8IXH6 220 aa12.37□□□□□ -0.43
CCBE1-203ENST00000589116 ATPAF2Q8N5M1 289 aa12.37□□□□□ -0.43
CCBE1-203ENST00000589116 LRRN4Q8WUT4 740 aa12.37□□□□□ -0.43
CCBE1-203ENST00000589116 PWWP2AQ96N64 755 aa12.37□□□□□ -0.43
CCBE1-203ENST00000589116 NECAB3Q96P71 396 aaPredicted RBP12.37□□□□□ -0.43
CCBE1-203ENST00000589116 C17orf80Q9BSJ5 609 aa12.37□□□□□ -0.43
CCBE1-203ENST00000589116 IL21Q9HBE4 155 aa12.37□□□□□ -0.43
CCBE1-203ENST00000589116 ZNF334Q9HCZ1 680 aaPredicted RBP12.37□□□□□ -0.43
CCBE1-203ENST00000589116 DNAJC17Q9NVM6 304 aaKnown RBP12.37□□□□□ -0.43
CCBE1-203ENST00000589116 SHROOM3Q8TF72 1996 aa12.36□□□□□ -0.43
CCBE1-203ENST00000589116 TCRBV7S3A2A0A539 114 aa12.36□□□□□ -0.43
CCBE1-203ENST00000589116 E7EVH7 732 aa12.36□□□□□ -0.43
CCBE1-203ENST00000589116 F5H5T6 163 aa12.36□□□□□ -0.43
CCBE1-203ENST00000589116 METTL18O95568 372 aa12.36□□□□□ -0.43
CCBE1-203ENST00000589116 APRTP07741 180 aa12.36□□□□□ -0.43
CCBE1-203ENST00000589116 TSHRP16473 764 aa12.36□□□□□ -0.43
CCBE1-203ENST00000589116 PFKLP17858 780 aa12.36□□□□□ -0.43
CCBE1-203ENST00000589116 TACR2P21452 398 aa12.36□□□□□ -0.43
CCBE1-203ENST00000589116 PTPN3P26045 913 aa12.36□□□□□ -0.43
CCBE1-203ENST00000589116 MAPKAPK2P49137 400 aa12.36□□□□□ -0.43
CCBE1-203ENST00000589116 KCNQ1P51787 676 aa12.36□□□□□ -0.43
CCBE1-203ENST00000589116 SARNPP82979 210 aaKnown RBP12.36□□□□□ -0.43
CCBE1-203ENST00000589116 PDIA2Q13087 525 aaKnown RBP12.36□□□□□ -0.43
CCBE1-203ENST00000589116 CCDC85BQ15834 202 aaPredicted RBP12.36□□□□□ -0.43
CCBE1-203ENST00000589116 ITPRIPL1Q6GPH6 555 aa12.36□□□□□ -0.43
CCBE1-203ENST00000589116 NADSYN1Q6IA69 706 aa12.36□□□□□ -0.43
CCBE1-203ENST00000589116 PDE12Q6L8Q7 609 aaKnown RBP12.36□□□□□ -0.43
CCBE1-203ENST00000589116 ZNF567Q8N184 647 aa12.36□□□□□ -0.43
CCBE1-203ENST00000589116 TAB3Q8N5C8 712 aaPredicted RBP12.36□□□□□ -0.43
CCBE1-203ENST00000589116 OR2W6PQ8NHA6 318 aa12.36□□□□□ -0.43
CCBE1-203ENST00000589116 FATE1Q969F0 183 aa12.36□□□□□ -0.43
CCBE1-203ENST00000589116 TIFAQ96CG3 184 aa12.36□□□□□ -0.43
CCBE1-203ENST00000589116 CELF6Q96J87 481 aaKnown RBP12.36□□□□□ -0.43
CCBE1-203ENST00000589116 RPRD1AQ96P16 312 aaPredicted RBP12.36□□□□□ -0.43
CCBE1-203ENST00000589116 DDX50Q9BQ39 737 aaKnown RBP12.36□□□□□ -0.43
CCBE1-203ENST00000589116 KLF16Q9BXK1 252 aaPredicted RBP12.36□□□□□ -0.43
CCBE1-203ENST00000589116 ROPN1BQ9BZX4 212 aaPredicted RBP12.36□□□□□ -0.43
CCBE1-203ENST00000589116 ROPN1Q9HAT0 212 aaPredicted RBP12.36□□□□□ -0.43
CCBE1-203ENST00000589116 TMBIM4Q9HC24 238 aa12.36□□□□□ -0.43
CCBE1-203ENST00000589116 MPP6Q9NZW5 540 aa12.36□□□□□ -0.43
CCBE1-203ENST00000589116 SEPT10Q9P0V9 454 aa12.36□□□□□ -0.43
CCBE1-203ENST00000589116 KLHL8Q9P2G9 620 aaPredicted RBP12.36□□□□□ -0.43
CCBE1-203ENST00000589116 GBF1Q92538 1859 aa12.36□□□□□ -0.43
CCBE1-203ENST00000589116 C2orf78A6NCI8 922 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 HIDE1A8MVS5 230 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 HMGB1P1B2RPK0 211 aaPredicted RBP12.35□□□□□ -0.43
CCBE1-203ENST00000589116 GOLGA8MH3BSY2 632 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 KCNK1O00180 336 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 DFFAO00273 331 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 STC2O76061 302 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 ACSL3O95573 720 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 FGF19O95750 216 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 SPATA31D3P0C874 917 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 DNAJB1P25685 340 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 CDC25CP30307 473 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 HOXA9P31269 272 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 CLCN4P51793 760 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 IFI35P80217 286 aaPredicted RBP12.35□□□□□ -0.43
CCBE1-203ENST00000589116 KYNUQ16719 465 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 KRT71Q3SY84 523 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 TEX44Q53QW1 395 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 TMEM31Q5JXX7 168 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 RABGAP1LQ5R372 815 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 FAXCQ5TGI0 409 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 SPATA31D4Q6ZUB0 917 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 TMC8Q8IU68 726 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 ZBED8Q8IZ13 594 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 NETO2Q8NC67 525 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 MRPS31Q92665 395 aaKnown RBP12.35□□□□□ -0.43
CCBE1-203ENST00000589116 LRRC39Q96DD0 335 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 C9orf72Q96LT7 481 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 SERPINB12Q96P63 405 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 GCNAQ96QF7 691 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 LRRC3Q9BY71 257 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 SLC39A8Q9C0K1 460 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 XAB2Q9HCS7 855 aaKnown RBP12.35□□□□□ -0.43
CCBE1-203ENST00000589116 ZNF212Q9UDV6 495 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 PCDHA11Q9Y5I1 949 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 NYNRINQ9P2P1 1898 aaKnown RBP12.35□□□□□ -0.43
CCBE1-203ENST00000589116 A0A087WUV0 522 aaPredicted RBP12.35□□□□□ -0.43
CCBE1-203ENST00000589116 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.35□□□□□ -0.43
CCBE1-203ENST00000589116 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.35□□□□□ -0.43
CCBE1-203ENST00000589116 ARHGAP42A6NI28 874 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 ERI2A8K979 691 aaKnown RBP12.35□□□□□ -0.43
CCBE1-203ENST00000589116 MAFKO60675 156 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 TCEA3O75764 348 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 SHBGP04278 402 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 IVLP07476 585 aa12.35□□□□□ -0.43
CCBE1-203ENST00000589116 MBL2P11226 248 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms