RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 SRFBP1Q8NEF9 429 aaKnown RBP3.87□□□□□ -1.79
SMAD4-207ENST00000589076 KAZALD1Q96I82 304 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 PIGSQ96S52 555 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 NPAS1Q99742 590 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 RNF26Q9BY78 433 aaPredicted RBP3.87□□□□□ -1.79
SMAD4-207ENST00000589076 FAM234AQ9H0X4 552 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 CDCP1Q9H5V8 836 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 TXLNGQ9NUQ3 528 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 RAB21Q9UL25 225 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 TRPC5Q9UL62 973 aaPredicted RBP3.87□□□□□ -1.79
SMAD4-207ENST00000589076 VPS4AQ9UN37 437 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 LZTS1Q9Y250 596 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 PCDHA10Q9Y5I2 948 aa3.87□□□□□ -1.79
SMAD4-207ENST00000589076 CYP3A7-CYP3A51PA0A087WV96 503 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 SAC3D1A6NKF1 404 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 CLIC1O00299 241 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 AGR2O95994 175 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 POLBP06746 335 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 SLC3A2P08195 630 aaKnown RBP3.86□□□□□ -1.79
SMAD4-207ENST00000589076 CNPP09543 421 aaKnown RBP3.86□□□□□ -1.79
SMAD4-207ENST00000589076 APEHP13798 732 aaKnown RBP3.86□□□□□ -1.79
SMAD4-207ENST00000589076 XBP1P17861 261 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 CD53P19397 219 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 CYP3A7P24462 503 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 CNTFP26441 200 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 CDC25AP30304 524 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 DDIT3P35638 169 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 FOXL2P58012 376 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 NANOS2P60321 138 aaKnown RBP3.86□□□□□ -1.79
SMAD4-207ENST00000589076 RPS13P62277 151 aaKnown RBP3.86□□□□□ -1.79
SMAD4-207ENST00000589076 RAE1P78406 368 aaKnown RBP3.86□□□□□ -1.79
SMAD4-207ENST00000589076 UBE3AQ05086 875 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 RNASELQ05823 741 aaKnown RBP3.86□□□□□ -1.79
SMAD4-207ENST00000589076 CHRNDQ07001 517 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 TBX2Q13207 712 aaPredicted RBP3.86□□□□□ -1.79
SMAD4-207ENST00000589076 SLC12A1Q13621 1099 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 LEXMQ3ZCV2 418 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 JAKMIP3Q5VZ66 844 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 COLCA1Q6ZS62 124 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 BBS12Q6ZW61 710 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 CPOQ8IVL8 374 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 PTGR2Q8N8N7 351 aaPredicted RBP3.86□□□□□ -1.79
SMAD4-207ENST00000589076 TEX19Q8NA77 164 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 ZBTB8BQ8NAP8 495 aaPredicted RBP3.86□□□□□ -1.79
SMAD4-207ENST00000589076 NAXEQ8NCW5 288 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 CEP70Q8NHQ1 597 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 SLC2A12Q8TD20 617 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 ASB12Q8WXK4 309 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 KTI12Q96EK9 354 aaPredicted RBP3.86□□□□□ -1.79
SMAD4-207ENST00000589076 TRMT61AQ96FX7 289 aaKnown RBP3.86□□□□□ -1.79
SMAD4-207ENST00000589076 HS6ST2Q96MM7 605 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 MMS19Q96T76 1030 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 TRMOQ9BU70 441 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 ELOVL1Q9BW60 279 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 MAF1Q9H063 256 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 RRP7AQ9Y3A4 280 aaKnown RBP3.86□□□□□ -1.79
SMAD4-207ENST00000589076 CACNA1IQ9P0X4 2223 aa3.86□□□□□ -1.79
SMAD4-207ENST00000589076 FYB1O15117 783 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 HOXC11O43248 304 aaPredicted RBP3.85□□□□□ -1.79
SMAD4-207ENST00000589076 SMAD6O43541 496 aaKnown RBP3.85□□□□□ -1.79
SMAD4-207ENST00000589076 TSPAN3O60637 253 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 ALDOAP04075 364 aaKnown RBP3.85□□□□□ -1.79
SMAD4-207ENST00000589076 CYP21A2P08686 494 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 CHN1P15882 459 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 IGFBP2P18065 325 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 HOXD9P28356 352 aaPredicted RBP3.85□□□□□ -1.79
SMAD4-207ENST00000589076 SLC8A1P32418 973 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 AGTR2P50052 363 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 RCAN1P53805 252 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 FAM3BP58499 235 aaPredicted RBP3.85□□□□□ -1.79
SMAD4-207ENST00000589076 VAMP2P63027 116 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 PDCLQ13371 301 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 TRPC3Q13507 836 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 MFSD13AQ14CX5 517 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 CNGA3Q16281 694 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 MAP3K21Q5TCX8 1036 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 TMEM65Q6PI78 240 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 VSTM1Q6UX27 236 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 KYAT3Q6YP21 454 aaKnown RBP3.85□□□□□ -1.79
SMAD4-207ENST00000589076 DEF8Q6ZN54 512 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 Q6ZTC4 211 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 LAS2Q8IYD9 372 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 MAFAQ8NHW3 353 aaPredicted RBP3.85□□□□□ -1.79
SMAD4-207ENST00000589076 MPLKIPQ8TAP9 179 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 AKAP1Q92667 903 aaKnown RBP eCLIP3.85□□□□□ -1.79
SMAD4-207ENST00000589076 PPM1MQ96MI6 270 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 TWNKQ96RR1 684 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 CTAGE1Q96RT6 745 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 PLEKHA2Q9HB19 425 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 PDE11AQ9HCR9 933 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 WASH6PQ9NQA3 447 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 ASIC5Q9NY37 505 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 GGA3Q9NZ52 723 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 ICKQ9UPZ9 632 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 CRYL1Q9Y2S2 319 aa3.85□□□□□ -1.79
SMAD4-207ENST00000589076 CCDC196A0A1B0GTZ2 297 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.84□□□□□ -1.79
SMAD4-207ENST00000589076 TCRBV5S1A1TA0A578 114 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 AGAP5A6NIR3 686 aa3.84□□□□□ -1.79
SMAD4-207ENST00000589076 LACTBL1A8MY62 500 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms