RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 P3H4Q92791 437 aa17.42■□□□□ 0.38
SCAMP4-211ENST00000588907 MYEOVQ96EZ4 313 aa17.42■□□□□ 0.38
SCAMP4-211ENST00000588907 BRD8Q9H0E9 1235 aa17.42■□□□□ 0.38
SCAMP4-211ENST00000588907 GOLGA6L10A0A0M3HER8 536 aa17.41■□□□□ 0.38
SCAMP4-211ENST00000588907 ARHGAP42A6NI28 874 aa17.41■□□□□ 0.38
SCAMP4-211ENST00000588907 FGGP02679 453 aa17.41■□□□□ 0.38
SCAMP4-211ENST00000588907 ASGR2P07307 311 aa17.41■□□□□ 0.38
SCAMP4-211ENST00000588907 KRT10P13645 584 aa17.41■□□□□ 0.38
SCAMP4-211ENST00000588907 GJA4P35212 333 aa17.41■□□□□ 0.38
SCAMP4-211ENST00000588907 ZNF33AQ06730 810 aa17.41■□□□□ 0.38
SCAMP4-211ENST00000588907 TNK2Q07912 1038 aa17.41■□□□□ 0.38
SCAMP4-211ENST00000588907 KLF1Q13351 362 aaPredicted RBP17.41■□□□□ 0.38
SCAMP4-211ENST00000588907 POLD3Q15054 466 aaPredicted RBP17.41■□□□□ 0.38
SCAMP4-211ENST00000588907 PDK1Q15118 436 aa17.41■□□□□ 0.38
SCAMP4-211ENST00000588907 RALGPS2Q86X27 583 aaPredicted RBP17.41■□□□□ 0.38
SCAMP4-211ENST00000588907 CIR1Q86X95 450 aaPredicted RBP17.41■□□□□ 0.38
SCAMP4-211ENST00000588907 ETFBKMTQ8IXQ9 262 aa17.41■□□□□ 0.38
SCAMP4-211ENST00000588907 UBALD2Q8IYN6 164 aa17.41■□□□□ 0.38
SCAMP4-211ENST00000588907 PLD5Q8N7P1 536 aa17.41■□□□□ 0.38
SCAMP4-211ENST00000588907 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.41■□□□□ 0.38
SCAMP4-211ENST00000588907 BHMTQ93088 406 aa17.41■□□□□ 0.38
SCAMP4-211ENST00000588907 HEMGNQ9BXL5 484 aa17.41■□□□□ 0.38
SCAMP4-211ENST00000588907 GTSE1Q9NYZ3 720 aa17.41■□□□□ 0.38
SCAMP4-211ENST00000588907 DEC1Q9P2X7 70 aa17.41■□□□□ 0.38
SCAMP4-211ENST00000588907 FBXO10Q9UK96 956 aa17.41■□□□□ 0.38
SCAMP4-211ENST00000588907 SLC27A6Q9Y2P4 619 aa17.41■□□□□ 0.38
SCAMP4-211ENST00000588907 UNC80Q8N2C7 3258 aa17.41■□□□□ 0.38
SCAMP4-211ENST00000588907 PPP1R12AO14974 1030 aaPredicted RBP17.4■□□□□ 0.38
SCAMP4-211ENST00000588907 FANCGO15287 622 aa17.4■□□□□ 0.38
SCAMP4-211ENST00000588907 DGKGP49619 791 aa17.4■□□□□ 0.38
SCAMP4-211ENST00000588907 IRAK1P51617 712 aa17.4■□□□□ 0.38
SCAMP4-211ENST00000588907 GNA12Q03113 381 aa17.4■□□□□ 0.38
SCAMP4-211ENST00000588907 CKAP4Q07065 602 aaKnown RBP17.4■□□□□ 0.38
SCAMP4-211ENST00000588907 LONRF2Q1L5Z9 754 aa17.4■□□□□ 0.38
SCAMP4-211ENST00000588907 DNTTIP2Q5QJE6 756 aaKnown RBP17.4■□□□□ 0.38
SCAMP4-211ENST00000588907 AFMIDQ63HM1 303 aa17.4■□□□□ 0.38
SCAMP4-211ENST00000588907 CXorf57Q6NSI4 855 aaKnown RBP17.4■□□□□ 0.38
SCAMP4-211ENST00000588907 ANKS1BQ7Z6G8 1248 aa17.4■□□□□ 0.38
SCAMP4-211ENST00000588907 AHI1Q8N157 1196 aa17.4■□□□□ 0.38
SCAMP4-211ENST00000588907 ST13P5Q8NFI4 369 aaPredicted RBP17.4■□□□□ 0.38
SCAMP4-211ENST00000588907 COG1Q8WTW3 980 aa17.4■□□□□ 0.38
SCAMP4-211ENST00000588907 HAUS1Q96CS2 278 aa17.4■□□□□ 0.38
SCAMP4-211ENST00000588907 FERMT1Q9BQL6 677 aa17.4■□□□□ 0.38
SCAMP4-211ENST00000588907 C2orf49Q9BVC5 232 aaPredicted RBP17.4■□□□□ 0.38
SCAMP4-211ENST00000588907 MUC3BQ9H195 1237 aa17.4■□□□□ 0.38
SCAMP4-211ENST00000588907 LRRC19Q9H756 370 aa17.4■□□□□ 0.38
SCAMP4-211ENST00000588907 DNAJC17Q9NVM6 304 aaKnown RBP17.4■□□□□ 0.38
SCAMP4-211ENST00000588907 PLK2Q9NYY3 685 aa17.4■□□□□ 0.38
SCAMP4-211ENST00000588907 HPCAL4Q9UM19 191 aa17.4■□□□□ 0.38
SCAMP4-211ENST00000588907 TICRRQ7Z2Z1 1910 aa17.39■□□□□ 0.37
SCAMP4-211ENST00000588907 ZSCAN5CA6NGD5 496 aaPredicted RBP17.39■□□□□ 0.37
SCAMP4-211ENST00000588907 MCF2LO15068 1137 aa17.39■□□□□ 0.37
SCAMP4-211ENST00000588907 PLK1P53350 603 aa17.39■□□□□ 0.37
SCAMP4-211ENST00000588907 GEMIN4P57678 1058 aaKnown RBP17.39■□□□□ 0.37
SCAMP4-211ENST00000588907 DYNLT1P63172 113 aa17.39■□□□□ 0.37
SCAMP4-211ENST00000588907 SULT2A1Q06520 285 aa17.39■□□□□ 0.37
SCAMP4-211ENST00000588907 XRCC4Q13426 336 aa17.39■□□□□ 0.37
SCAMP4-211ENST00000588907 EIF4HQ15056 248 aaKnown RBP17.39■□□□□ 0.37
SCAMP4-211ENST00000588907 WHAMMP3Q1A5X7 153 aa17.39■□□□□ 0.37
SCAMP4-211ENST00000588907 TJAP1Q5JTD0 557 aa17.39■□□□□ 0.37
SCAMP4-211ENST00000588907 GRAMD4Q6IC98 578 aa17.39■□□□□ 0.37
SCAMP4-211ENST00000588907 ATPAF2Q8N5M1 289 aa17.39■□□□□ 0.37
SCAMP4-211ENST00000588907 DCAF4L2Q8NA75 395 aa17.39■□□□□ 0.37
SCAMP4-211ENST00000588907 ACDQ96AP0 544 aa17.39■□□□□ 0.37
SCAMP4-211ENST00000588907 CDC23Q9UJX2 597 aa17.39■□□□□ 0.37
SCAMP4-211ENST00000588907 GGA2Q9UJY4 613 aa17.39■□□□□ 0.37
SCAMP4-211ENST00000588907 HEY1Q9Y5J3 304 aa17.39■□□□□ 0.37
SCAMP4-211ENST00000588907 KIAA1549LQ6ZVL6 1849 aa17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 OTOL1A6NHN0 477 aaPredicted RBP17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 HACD1B0YJ81 288 aa17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 TIMM44O43615 452 aa17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 MFSD11O43934 449 aa17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 TULP3O75386 442 aa17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 URI1O94763 535 aaPredicted RBP17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 PABPC1P11940 636 aaKnown RBP17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 GALNT2Q10471 571 aa17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 NOMO1Q15155 1222 aa17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 GAB4Q2WGN9 574 aa17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 RNF219Q5W0B1 726 aaPredicted RBP17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 TIGD7Q6NT04 549 aaPredicted RBP17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 AADACL2Q6P093 401 aa17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 KIAA0907Q7Z7F0 614 aaPredicted RBP17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 METTL3Q86U44 580 aaKnown RBP17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 CREG2Q8IUH2 290 aa17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 GJD3Q8N144 294 aa17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 NPWQ8N729 165 aa17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 CCDC26Q8TAB7 109 aa17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 FATE1Q969F0 183 aa17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 HDAC11Q96DB2 347 aa17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 OLFM3Q96PB7 478 aa17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 PNKPQ96T60 521 aa17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 FEM1AQ9BSK4 669 aa17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 KLC2Q9H0B6 622 aa17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 ABCB8Q9NUT2 735 aa17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 ETNK2Q9NVF9 386 aa17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 HAUS2Q9NVX0 235 aa17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 DTLQ9NZJ0 730 aa17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 VPS28Q9UK41 221 aa17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 PIAS3Q9Y6X2 628 aa17.38■□□□□ 0.37
SCAMP4-211ENST00000588907 CHD5Q8TDI0 1954 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms