RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 DNAI1Q9UI46 699 aa19.5■□□□□ 0.71
CLPTM1-209ENST00000588855 RNF40O75150 1001 aa19.49■□□□□ 0.71
CLPTM1-209ENST00000588855 FTCDO95954 541 aa19.49■□□□□ 0.71
CLPTM1-209ENST00000588855 KRT1P04264 644 aa19.49■□□□□ 0.71
CLPTM1-209ENST00000588855 AOC1P19801 751 aa19.49■□□□□ 0.71
CLPTM1-209ENST00000588855 MAPKAPK2P49137 400 aa19.49■□□□□ 0.71
CLPTM1-209ENST00000588855 DPYSL3Q14195 570 aa19.49■□□□□ 0.71
CLPTM1-209ENST00000588855 PITRM1Q5JRX3 1037 aa19.49■□□□□ 0.71
CLPTM1-209ENST00000588855 C6orf118Q5T5N4 469 aa19.49■□□□□ 0.71
CLPTM1-209ENST00000588855 RNF219Q5W0B1 726 aaPredicted RBP19.49■□□□□ 0.71
CLPTM1-209ENST00000588855 SETD3Q86TU7 594 aaPredicted RBP19.49■□□□□ 0.71
CLPTM1-209ENST00000588855 NT5DC3Q86UY8 548 aa19.49■□□□□ 0.71
CLPTM1-209ENST00000588855 ADIPOR2Q86V24 386 aa19.49■□□□□ 0.71
CLPTM1-209ENST00000588855 REXO1L1PQ8IX06 675 aa19.49■□□□□ 0.71
CLPTM1-209ENST00000588855 APCDD1Q8J025 514 aa19.49■□□□□ 0.71
CLPTM1-209ENST00000588855 SYCE1Q8N0S2 351 aa19.49■□□□□ 0.71
CLPTM1-209ENST00000588855 KCTD6Q8NC69 237 aa19.49■□□□□ 0.71
CLPTM1-209ENST00000588855 CALN1Q9BXU9 219 aa19.49■□□□□ 0.71
CLPTM1-209ENST00000588855 ZDHHC4Q9NPG8 344 aa19.49■□□□□ 0.71
CLPTM1-209ENST00000588855 NUP205Q92621 2012 aa19.48■□□□□ 0.71
CLPTM1-209ENST00000588855 LRRD1A4D1F6 860 aa19.48■□□□□ 0.71
CLPTM1-209ENST00000588855 WASH4PA8MWX3 477 aa19.48■□□□□ 0.71
CLPTM1-209ENST00000588855 DLL1O00548 723 aa19.48■□□□□ 0.71
CLPTM1-209ENST00000588855 DAPK3O43293 454 aa19.48■□□□□ 0.71
CLPTM1-209ENST00000588855 CHRM1P11229 460 aaPredicted RBP19.48■□□□□ 0.71
CLPTM1-209ENST00000588855 ERCC2P18074 760 aa19.48■□□□□ 0.71
CLPTM1-209ENST00000588855 KDELR1P24390 212 aa19.48■□□□□ 0.71
CLPTM1-209ENST00000588855 IL4RP24394 825 aa19.48■□□□□ 0.71
CLPTM1-209ENST00000588855 TNFRSF4P43489 277 aa19.48■□□□□ 0.71
CLPTM1-209ENST00000588855 HCAR3P49019 387 aa19.48■□□□□ 0.71
CLPTM1-209ENST00000588855 PDK2Q15119 407 aa19.48■□□□□ 0.71
CLPTM1-209ENST00000588855 PLEKHG6Q3KR16 790 aa19.48■□□□□ 0.71
CLPTM1-209ENST00000588855 FBXO43Q4G163 708 aa19.48■□□□□ 0.71
CLPTM1-209ENST00000588855 EMC10Q5UCC4 262 aa19.48■□□□□ 0.71
CLPTM1-209ENST00000588855 MBLAC2Q68D91 279 aa19.48■□□□□ 0.71
CLPTM1-209ENST00000588855 NUDT18Q6ZVK8 323 aa19.48■□□□□ 0.71
CLPTM1-209ENST00000588855 SORCS1Q8WY21 1168 aa19.48■□□□□ 0.71
CLPTM1-209ENST00000588855 CLDN23Q96B33 292 aa19.48■□□□□ 0.71
CLPTM1-209ENST00000588855 ALG14Q96F25 216 aa19.48■□□□□ 0.71
CLPTM1-209ENST00000588855 CIPCQ9C0C6 399 aa19.48■□□□□ 0.71
CLPTM1-209ENST00000588855 RETREG1Q9H6L5 497 aa19.48■□□□□ 0.71
CLPTM1-209ENST00000588855 TRMT1Q9NXH9 659 aaKnown RBP19.48■□□□□ 0.71
CLPTM1-209ENST00000588855 HCN2Q9UL51 889 aa19.48■□□□□ 0.71
CLPTM1-209ENST00000588855 OR51B4Q9Y5P0 310 aa19.48■□□□□ 0.71
CLPTM1-209ENST00000588855 KMT2EQ8IZD2 1858 aa19.48■□□□□ 0.71
CLPTM1-209ENST00000588855 A0A0D9SEW6 157 aa19.47■□□□□ 0.71
CLPTM1-209ENST00000588855 NCAM2O15394 837 aa19.47■□□□□ 0.71
CLPTM1-209ENST00000588855 ZSCAN12O43309 604 aa19.47■□□□□ 0.71
CLPTM1-209ENST00000588855 AMPD1P23109 780 aa19.47■□□□□ 0.71
CLPTM1-209ENST00000588855 CTNNA1P35221 906 aaKnown RBP19.47■□□□□ 0.71
CLPTM1-209ENST00000588855 KIR2DL1P43626 348 aaPredicted RBP19.47■□□□□ 0.71
CLPTM1-209ENST00000588855 CLCN5P51795 746 aa19.47■□□□□ 0.71
CLPTM1-209ENST00000588855 OXCT1P55809 520 aa19.47■□□□□ 0.71
CLPTM1-209ENST00000588855 SLC12A1Q13621 1099 aa19.47■□□□□ 0.71
CLPTM1-209ENST00000588855 PKN3Q6P5Z2 889 aa19.47■□□□□ 0.71
CLPTM1-209ENST00000588855 PEX26Q7Z412 305 aa19.47■□□□□ 0.71
CLPTM1-209ENST00000588855 FBXL6Q8N531 539 aa19.47■□□□□ 0.71
CLPTM1-209ENST00000588855 ZNF670Q9BS34 389 aa19.47■□□□□ 0.71
CLPTM1-209ENST00000588855 FEM1AQ9BSK4 669 aa19.47■□□□□ 0.71
CLPTM1-209ENST00000588855 MUC3BQ9H195 1237 aa19.47■□□□□ 0.71
CLPTM1-209ENST00000588855 ETNK2Q9NVF9 386 aa19.47■□□□□ 0.71
CLPTM1-209ENST00000588855 ELOVL2Q9NXB9 296 aa19.47■□□□□ 0.71
CLPTM1-209ENST00000588855 DDX56Q9NY93 547 aaKnown RBP19.47■□□□□ 0.71
CLPTM1-209ENST00000588855 DLGAP2Q9P1A6 1054 aa19.47■□□□□ 0.71
CLPTM1-209ENST00000588855 RCOR3Q9P2K3 495 aaPredicted RBP19.47■□□□□ 0.71
CLPTM1-209ENST00000588855 AMFRQ9UKV5 643 aa19.47■□□□□ 0.71
CLPTM1-209ENST00000588855 PACSIN2Q9UNF0 486 aaPredicted RBP19.47■□□□□ 0.71
CLPTM1-209ENST00000588855 STARD13Q9Y3M8 1113 aa19.47■□□□□ 0.71
CLPTM1-209ENST00000588855 MFHAS1Q9Y4C4 1052 aa19.47■□□□□ 0.71
CLPTM1-209ENST00000588855 NYNRINQ9P2P1 1898 aaKnown RBP19.47■□□□□ 0.71
CLPTM1-209ENST00000588855 ILVBLA1L0T0 632 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 C3orf70A6NLC5 250 aaPredicted RBP19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 CTNNA2P26232 953 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 TIE1P35590 1138 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 PLK1P53350 603 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 GAS6Q14393 721 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 EIF4HQ15056 248 aaKnown RBP19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 C2orf27AQ580R0 203 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 EGFLAMQ63HQ2 1017 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 MAP7D3Q8IWC1 876 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 KATNAL2Q8IYT4 538 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 SYNPOQ8N3V7 929 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 TMEM105Q8N8V8 129 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 OR7D4Q8NG98 312 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 RPLP0P6Q8NHW5 317 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 USP33Q8TEY7 942 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 RNF25Q96BH1 459 aaPredicted RBP19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 NOL6Q9H6R4 1146 aaKnown RBP19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 VPS28Q9UK41 221 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 USP27XA6NNY8 438 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 DCLK1O15075 740 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 GPR37L1O60883 481 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 RAMP2O60895 175 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 POLR2EP19388 210 aaKnown RBP19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 ACVRL1P37023 503 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 CTSOP43234 321 aaPredicted RBP19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 RPS9P46781 194 aaKnown RBP19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 GNA12Q03113 381 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 DMC1Q14565 340 aa19.46■□□□□ 0.71
CLPTM1-209ENST00000588855 ANKRD20A8PQ5CZ79 823 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms