RNA–Protein interactions for RNA: ENST00000587427.5

GHDC-207, Transcript of GH3 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GHDC, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-207ENST00000587427 CDH19Q9H159 772 aa16.37■□□□□ 0.21
GHDC-207ENST00000587427 SUDS3Q9H7L9 328 aaPredicted RBP16.37■□□□□ 0.21
GHDC-207ENST00000587427 COG4Q9H9E3 785 aa16.37■□□□□ 0.21
GHDC-207ENST00000587427 TMEM216Q9P0N5 145 aa16.37■□□□□ 0.21
GHDC-207ENST00000587427 SIX4Q9UIU6 781 aa16.37■□□□□ 0.21
GHDC-207ENST00000587427 MCM3APO60318 1980 aa16.37■□□□□ 0.21
GHDC-207ENST00000587427 ARHGAP10A1A4S6 786 aa16.37■□□□□ 0.21
GHDC-207ENST00000587427 E9PBE3 544 aa16.37■□□□□ 0.21
GHDC-207ENST00000587427 H3BSA7 217 aa16.37■□□□□ 0.21
GHDC-207ENST00000587427 KLHL41O60662 606 aa16.37■□□□□ 0.21
GHDC-207ENST00000587427 PRKCBP05771 671 aa16.37■□□□□ 0.21
GHDC-207ENST00000587427 VDRP11473 427 aa16.37■□□□□ 0.21
GHDC-207ENST00000587427 CPA3P15088 417 aa16.37■□□□□ 0.21
GHDC-207ENST00000587427 HSPA13P48723 471 aa16.37■□□□□ 0.21
GHDC-207ENST00000587427 GALK1P51570 392 aa16.37■□□□□ 0.21
GHDC-207ENST00000587427 PPM1JQ5JR12 505 aa16.37■□□□□ 0.21
GHDC-207ENST00000587427 C6orf52Q5T4I8 152 aa16.37■□□□□ 0.21
GHDC-207ENST00000587427 OR6B2Q6IFH4 312 aa16.37■□□□□ 0.21
GHDC-207ENST00000587427 C16orf89Q6UX73 402 aa16.37■□□□□ 0.21
GHDC-207ENST00000587427 RBM12BQ8IXT5 1001 aaKnown RBP16.37■□□□□ 0.21
GHDC-207ENST00000587427 TMEM130Q8N3G9 435 aa16.37■□□□□ 0.21
GHDC-207ENST00000587427 CATSPER2Q96P56 530 aa16.37■□□□□ 0.21
GHDC-207ENST00000587427 PLEKHG4BQ96PX9 1271 aa16.37■□□□□ 0.21
GHDC-207ENST00000587427 OXCT2Q9BYC2 517 aaPredicted RBP16.37■□□□□ 0.21
GHDC-207ENST00000587427 RIMS3Q9UJD0 308 aa16.37■□□□□ 0.21
GHDC-207ENST00000587427 VPS28Q9UK41 221 aa16.37■□□□□ 0.21
GHDC-207ENST00000587427 PADI4Q9UM07 663 aa16.37■□□□□ 0.21
GHDC-207ENST00000587427 PTCH2Q9Y6C5 1203 aa16.37■□□□□ 0.21
GHDC-207ENST00000587427 MDM4O15151 490 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 MAFO75444 373 aaPredicted RBP16.36■□□□□ 0.21
GHDC-207ENST00000587427 CAPNS1P04632 268 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 KRT19P08727 400 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 THRAP10827 490 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 GLDCP23378 1020 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 SLC5A2P31639 672 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 CRADDP78560 199 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 MRPS22P82650 360 aaKnown RBP16.36■□□□□ 0.21
GHDC-207ENST00000587427 CA9Q16790 459 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 CCDC153Q494R4 210 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 SCYL2Q6P3W7 929 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 CEP70Q8NHQ1 597 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 UBA3Q8TBC4 463 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 TRIB2Q92519 343 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 PIWIL1Q96J94 861 aaKnown RBP16.36■□□□□ 0.21
GHDC-207ENST00000587427 QKIQ96PU8 341 aaKnown RBP eCLIP16.36■□□□□ 0.21
GHDC-207ENST00000587427 SNRNP25Q9BV90 132 aaKnown RBP16.36■□□□□ 0.21
GHDC-207ENST00000587427 RNPEPQ9H4A4 650 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 NRBP2Q9NSY0 501 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 BCAP29Q9UHQ4 241 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 F5H423 210 aaPredicted RBP16.36■□□□□ 0.21
GHDC-207ENST00000587427 AIM2O14862 343 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 MAGEB3O15480 346 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 PROZP22891 400 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 ICAM3P32942 547 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 ADARP55265 1226 aaKnown RBP16.36■□□□□ 0.21
GHDC-207ENST00000587427 STILQ15468 1287 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 ADRM1Q16186 407 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 PPP6R3Q5H9R7 873 aaPredicted RBP16.36■□□□□ 0.21
GHDC-207ENST00000587427 GALNT4Q8N4A0 578 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 MIPOL1Q8TD10 442 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 GAB3Q8WWW8 586 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 CNDP1Q96KN2 507 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 LENG8Q96PV6 779 aaPredicted RBP16.36■□□□□ 0.21
GHDC-207ENST00000587427 MRPL1Q9BYD6 325 aaKnown RBP16.36■□□□□ 0.21
GHDC-207ENST00000587427 CYP3A43Q9HB55 503 aa16.36■□□□□ 0.21
GHDC-207ENST00000587427 PLXNA1Q9UIW2 1896 aa16.35■□□□□ 0.21
GHDC-207ENST00000587427 KIAA1217Q5T5P2 1943 aa16.35■□□□□ 0.21
GHDC-207ENST00000587427 A0A1B0GTW7 788 aa16.35■□□□□ 0.21
GHDC-207ENST00000587427 GRAP2O75791 330 aa16.35■□□□□ 0.21
GHDC-207ENST00000587427 PGAM1P18669 254 aa16.35■□□□□ 0.21
GHDC-207ENST00000587427 CYP2F1P24903 491 aa16.35■□□□□ 0.21
GHDC-207ENST00000587427 ATXN3P54252 364 aaPredicted RBP16.35■□□□□ 0.21
GHDC-207ENST00000587427 EMP3P54852 163 aa16.35■□□□□ 0.21
GHDC-207ENST00000587427 TMED1Q13445 227 aa16.35■□□□□ 0.21
GHDC-207ENST00000587427 CYLC2Q14093 348 aaPredicted RBP16.35■□□□□ 0.21
GHDC-207ENST00000587427 SLC9B1Q4ZJI4 515 aa16.35■□□□□ 0.21
GHDC-207ENST00000587427 ACBD5Q5T8D3 534 aaPredicted RBP16.35■□□□□ 0.21
GHDC-207ENST00000587427 DUS1LQ6P1R4 473 aaKnown RBP16.35■□□□□ 0.21
GHDC-207ENST00000587427 MPZL3Q6UWV2 235 aa16.35■□□□□ 0.21
GHDC-207ENST00000587427 RAET1EQ8TD07 263 aa16.35■□□□□ 0.21
GHDC-207ENST00000587427 SOCS4Q8WXH5 440 aa16.35■□□□□ 0.21
GHDC-207ENST00000587427 COPS7BQ9H9Q2 264 aaPredicted RBP16.35■□□□□ 0.21
GHDC-207ENST00000587427 ZNF358Q9NW07 568 aa16.35■□□□□ 0.21
GHDC-207ENST00000587427 PIH1D1Q9NWS0 290 aaKnown RBP16.35■□□□□ 0.21
GHDC-207ENST00000587427 MTMR10Q9NXD2 777 aa16.35■□□□□ 0.21
GHDC-207ENST00000587427 THEGQ9P2T0 379 aa16.35■□□□□ 0.21
GHDC-207ENST00000587427 GNEQ9Y223 722 aaKnown RBP16.35■□□□□ 0.21
GHDC-207ENST00000587427 ZNF510Q9Y2H8 683 aa16.35■□□□□ 0.21
GHDC-207ENST00000587427 HEMK1Q9Y5R4 338 aaPredicted RBP16.35■□□□□ 0.21
GHDC-207ENST00000587427 PSAT1Q9Y617 370 aa16.35■□□□□ 0.21
GHDC-207ENST00000587427 TMEM114B3SHH9 223 aa16.35■□□□□ 0.21
GHDC-207ENST00000587427 FAM58BPP0C7Q3 252 aa16.35■□□□□ 0.21
GHDC-207ENST00000587427 ZFXP17010 805 aaPredicted RBP16.35■□□□□ 0.21
GHDC-207ENST00000587427 NR2C2P49116 596 aa16.35■□□□□ 0.21
GHDC-207ENST00000587427 NR1H2P55055 460 aa16.35■□□□□ 0.21
GHDC-207ENST00000587427 CDKL1Q00532 357 aa16.35■□□□□ 0.21
GHDC-207ENST00000587427 GBE1Q04446 702 aa16.35■□□□□ 0.21
GHDC-207ENST00000587427 ZNF423Q2M1K9 1284 aa16.35■□□□□ 0.21
GHDC-207ENST00000587427 CASC4Q6P4E1 433 aa16.35■□□□□ 0.21
GHDC-207ENST00000587427 LRRC8BQ6P9F7 803 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms