RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 MPP6Q9NZW5 540 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 MBD1Q9UIS9 605 aaPredicted RBP15.25■□□□□ 0.03
ATG4D-207ENST00000587256 SLC25A13Q9UJS0 675 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 BZW2Q9Y6E2 419 aaKnown RBP15.25■□□□□ 0.03
ATG4D-207ENST00000587256 SDK1Q7Z5N4 2213 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 PLXND1Q9Y4D7 1925 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 IGHV1OR15-9A0A0B4J2B8 117 aa15.24■□□□□ 0.03
ATG4D-207ENST00000587256 AP5Z1O43299 807 aa15.24■□□□□ 0.03
ATG4D-207ENST00000587256 SERPING1P05155 500 aa15.24■□□□□ 0.03
ATG4D-207ENST00000587256 SRPRAP08240 638 aaKnown RBP15.24■□□□□ 0.03
ATG4D-207ENST00000587256 GZMAP12544 262 aa15.24■□□□□ 0.03
ATG4D-207ENST00000587256 CASP14P31944 242 aa15.24■□□□□ 0.03
ATG4D-207ENST00000587256 ADRA1BP35368 520 aa15.24■□□□□ 0.03
ATG4D-207ENST00000587256 NNMTP40261 264 aa15.24■□□□□ 0.03
ATG4D-207ENST00000587256 STK19P49842 368 aaPredicted RBP15.24■□□□□ 0.03
ATG4D-207ENST00000587256 ZNF143P52747 638 aaPredicted RBP15.24■□□□□ 0.03
ATG4D-207ENST00000587256 CSRP2Q16527 193 aa15.24■□□□□ 0.03
ATG4D-207ENST00000587256 HNRNPA1L2Q32P51 320 aaKnown RBP15.24■□□□□ 0.03
ATG4D-207ENST00000587256 PPP1R15BQ5SWA1 713 aa15.24■□□□□ 0.03
ATG4D-207ENST00000587256 C6orf118Q5T5N4 469 aa15.24■□□□□ 0.03
ATG4D-207ENST00000587256 LYSMD4Q5XG99 296 aa15.24■□□□□ 0.03
ATG4D-207ENST00000587256 SCYL2Q6P3W7 929 aa15.24■□□□□ 0.03
ATG4D-207ENST00000587256 DNAAF5Q86Y56 855 aa15.24■□□□□ 0.03
ATG4D-207ENST00000587256 ZNF683Q8IZ20 524 aa15.24■□□□□ 0.03
ATG4D-207ENST00000587256 CCDC185Q8N715 623 aa15.24■□□□□ 0.03
ATG4D-207ENST00000587256 KDM1BQ8NB78 822 aa15.24■□□□□ 0.03
ATG4D-207ENST00000587256 CENPIQ92674 756 aaPredicted RBP15.24■□□□□ 0.03
ATG4D-207ENST00000587256 RPL10LQ96L21 214 aaKnown RBP15.24■□□□□ 0.03
ATG4D-207ENST00000587256 MRGPRX3Q96LB0 322 aa15.24■□□□□ 0.03
ATG4D-207ENST00000587256 CNPY3Q9BT09 278 aa15.24■□□□□ 0.03
ATG4D-207ENST00000587256 ZYG11BQ9C0D3 744 aa15.24■□□□□ 0.03
ATG4D-207ENST00000587256 MTG2Q9H4K7 406 aa15.24■□□□□ 0.03
ATG4D-207ENST00000587256 PRSS16Q9NQE7 514 aa15.24■□□□□ 0.03
ATG4D-207ENST00000587256 CNOT8Q9UFF9 292 aaKnown RBP15.24■□□□□ 0.03
ATG4D-207ENST00000587256 SUN2Q9UH99 717 aa15.24■□□□□ 0.03
ATG4D-207ENST00000587256 TBC1D30Q9Y2I9 924 aa15.24■□□□□ 0.03
ATG4D-207ENST00000587256 IGLV3-10A0A075B6K4 115 aa15.23■□□□□ 0.03
ATG4D-207ENST00000587256 EDDM13A0A1B0GTR0 161 aa15.23■□□□□ 0.03
ATG4D-207ENST00000587256 TTC34A8MYJ7 566 aa15.23■□□□□ 0.03
ATG4D-207ENST00000587256 RTN2O75298 545 aa15.23■□□□□ 0.03
ATG4D-207ENST00000587256 NDUFS2O75306 463 aa15.23■□□□□ 0.03
ATG4D-207ENST00000587256 FTLP02792 175 aaPredicted RBP15.23■□□□□ 0.03
ATG4D-207ENST00000587256 TPM1P09493 284 aa15.23■□□□□ 0.03
ATG4D-207ENST00000587256 PSMA2P25787 234 aa15.23■□□□□ 0.03
ATG4D-207ENST00000587256 CD6P30203 668 aa15.23■□□□□ 0.03
ATG4D-207ENST00000587256 PTGER3P43115 390 aa15.23■□□□□ 0.03
ATG4D-207ENST00000587256 PLK1P53350 603 aa15.23■□□□□ 0.03
ATG4D-207ENST00000587256 MAMLD1Q13495 774 aa15.23■□□□□ 0.03
ATG4D-207ENST00000587256 TRIM14Q14142 442 aa15.23■□□□□ 0.03
ATG4D-207ENST00000587256 TTC31Q49AM3 519 aaPredicted RBP15.23■□□□□ 0.03
ATG4D-207ENST00000587256 EFHC2Q5JST6 749 aa15.23■□□□□ 0.03
ATG4D-207ENST00000587256 HGSNATQ68CP4 663 aa15.23■□□□□ 0.03
ATG4D-207ENST00000587256 ZNF776Q68DI1 518 aaPredicted RBP15.23■□□□□ 0.03
ATG4D-207ENST00000587256 SPECC1LQ69YQ0 1117 aa15.23■□□□□ 0.03
ATG4D-207ENST00000587256 RWDD4Q6NW29 188 aaKnown RBP15.23■□□□□ 0.03
ATG4D-207ENST00000587256 PRR23CQ6ZRP0 262 aa15.23■□□□□ 0.03
ATG4D-207ENST00000587256 TMC6Q7Z403 805 aa15.23■□□□□ 0.03
ATG4D-207ENST00000587256 SETD3Q86TU7 594 aaPredicted RBP15.23■□□□□ 0.03
ATG4D-207ENST00000587256 METTL3Q86U44 580 aaKnown RBP15.23■□□□□ 0.03
ATG4D-207ENST00000587256 C12orf50Q8NA57 414 aaPredicted RBP15.23■□□□□ 0.03
ATG4D-207ENST00000587256 OR52K2Q8NGK3 314 aa15.23■□□□□ 0.03
ATG4D-207ENST00000587256 NTAN1Q96AB6 310 aa15.23■□□□□ 0.03
ATG4D-207ENST00000587256 MYO19Q96H55 970 aa15.23■□□□□ 0.03
ATG4D-207ENST00000587256 FEM1AQ9BSK4 669 aa15.23■□□□□ 0.03
ATG4D-207ENST00000587256 C2orf49Q9BVC5 232 aaPredicted RBP15.23■□□□□ 0.03
ATG4D-207ENST00000587256 USP36Q9P275 1121 aaKnown RBP15.23■□□□□ 0.03
ATG4D-207ENST00000587256 MYO1AQ9UBC5 1043 aa15.23■□□□□ 0.03
ATG4D-207ENST00000587256 OR12D3Q9UGF7 316 aa15.23■□□□□ 0.03
ATG4D-207ENST00000587256 ADAMTS1Q9UHI8 967 aa15.23■□□□□ 0.03
ATG4D-207ENST00000587256 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.23■□□□□ 0.03
ATG4D-207ENST00000587256 SCINQ9Y6U3 715 aa15.23■□□□□ 0.03
ATG4D-207ENST00000587256 CFAP54Q96N23 3096 aa15.23■□□□□ 0.03
ATG4D-207ENST00000587256 ATXN2Q99700 1313 aaKnown RBP15.22■□□□□ 0.03
ATG4D-207ENST00000587256 THADAQ6YHU6 1953 aa15.22■□□□□ 0.03
ATG4D-207ENST00000587256 BCLAF3A2AJT9 711 aaKnown RBP15.22■□□□□ 0.03
ATG4D-207ENST00000587256 DRGXA6NNA5 263 aa15.22■□□□□ 0.03
ATG4D-207ENST00000587256 FOXD2O60548 495 aaPredicted RBP15.22■□□□□ 0.03
ATG4D-207ENST00000587256 SIN3BO75182 1162 aa15.22■□□□□ 0.03
ATG4D-207ENST00000587256 DNTTP04053 509 aa15.22■□□□□ 0.03
ATG4D-207ENST00000587256 PLEKP08567 350 aaPredicted RBP15.22■□□□□ 0.03
ATG4D-207ENST00000587256 MYBL1P10243 752 aa15.22■□□□□ 0.03
ATG4D-207ENST00000587256 TGM1P22735 817 aa15.22■□□□□ 0.03
ATG4D-207ENST00000587256 OR1E1P30953 314 aa15.22■□□□□ 0.03
ATG4D-207ENST00000587256 TPMTP51580 245 aa15.22■□□□□ 0.03
ATG4D-207ENST00000587256 KRT83P78385 493 aa15.22■□□□□ 0.03
ATG4D-207ENST00000587256 SF3A2Q15428 464 aaKnown RBP15.22■□□□□ 0.03
ATG4D-207ENST00000587256 AASDHQ4L235 1098 aaPredicted RBP15.22■□□□□ 0.03
ATG4D-207ENST00000587256 SPDYCQ5MJ68 293 aa15.22■□□□□ 0.03
ATG4D-207ENST00000587256 PLEKHA7Q6IQ23 1121 aa15.22■□□□□ 0.03
ATG4D-207ENST00000587256 SLFN11Q7Z7L1 901 aa15.22■□□□□ 0.03
ATG4D-207ENST00000587256 DRC7Q8IY82 874 aa15.22■□□□□ 0.03
ATG4D-207ENST00000587256 DEFB119Q8N690 84 aa15.22■□□□□ 0.03
ATG4D-207ENST00000587256 PIGKQ92643 395 aa15.22■□□□□ 0.03
ATG4D-207ENST00000587256 TBC1D31Q96DN5 1066 aa15.22■□□□□ 0.03
ATG4D-207ENST00000587256 HSPA12BQ96MM6 686 aa15.22■□□□□ 0.03
ATG4D-207ENST00000587256 SMOC1Q9H4F8 434 aa15.22■□□□□ 0.03
ATG4D-207ENST00000587256 VPS45Q9NRW7 570 aa15.22■□□□□ 0.03
ATG4D-207ENST00000587256 PPARGC1AQ9UBK2 798 aaKnown RBP15.22■□□□□ 0.03
ATG4D-207ENST00000587256 SLCO3A1Q9UIG8 710 aa15.22■□□□□ 0.03
ATG4D-207ENST00000587256 RNASEH1O60930 286 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms