RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 TMC5Q6UXY8 1006 aa20.98■□□□□ 0.95
ATG4D-204ENST00000586417 MIB1Q86YT6 1006 aa20.98■□□□□ 0.95
ATG4D-204ENST00000586417 CCDC13Q8IYE1 715 aa20.98■□□□□ 0.95
ATG4D-204ENST00000586417 ZNF683Q8IZ20 524 aa20.98■□□□□ 0.95
ATG4D-204ENST00000586417 MICALL1Q8N3F8 863 aa20.98■□□□□ 0.95
ATG4D-204ENST00000586417 ZNF276Q8N554 614 aa20.98■□□□□ 0.95
ATG4D-204ENST00000586417 CCNYQ8ND76 341 aa20.98■□□□□ 0.95
ATG4D-204ENST00000586417 OVCA2Q8WZ82 227 aa20.98■□□□□ 0.95
ATG4D-204ENST00000586417 APOL5Q9BWW9 433 aa20.98■□□□□ 0.95
ATG4D-204ENST00000586417 PRKD2Q9BZL6 878 aa20.98■□□□□ 0.95
ATG4D-204ENST00000586417 ZDHHC7Q9NXF8 308 aa20.98■□□□□ 0.95
ATG4D-204ENST00000586417 DNMT3BQ9UBC3 853 aaKnown RBP20.98■□□□□ 0.95
ATG4D-204ENST00000586417 DPP7Q9UHL4 492 aa20.98■□□□□ 0.95
ATG4D-204ENST00000586417 DENND4CQ5VZ89 1909 aa20.98■□□□□ 0.95
ATG4D-204ENST00000586417 HMGB1P1B2RPK0 211 aaPredicted RBP20.97■□□□□ 0.95
ATG4D-204ENST00000586417 E9PAM4 449 aa20.97■□□□□ 0.95
ATG4D-204ENST00000586417 RNF103O00237 685 aa20.97■□□□□ 0.95
ATG4D-204ENST00000586417 EIF3HO15372 352 aaKnown RBP eCLIP20.97■□□□□ 0.95
ATG4D-204ENST00000586417 FGF10O15520 208 aaPredicted RBP20.97■□□□□ 0.95
ATG4D-204ENST00000586417 ABHD2P08910 425 aa20.97■□□□□ 0.95
ATG4D-204ENST00000586417 HNRNPA1P09651 372 aaKnown RBP eCLIP20.97■□□□□ 0.95
ATG4D-204ENST00000586417 AGBL2Q5U5Z8 902 aa20.97■□□□□ 0.95
ATG4D-204ENST00000586417 GAREM2Q75VX8 874 aa20.97■□□□□ 0.95
ATG4D-204ENST00000586417 ELMOD1Q8N336 334 aa20.97■□□□□ 0.95
ATG4D-204ENST00000586417 HDAC11Q96DB2 347 aa20.97■□□□□ 0.95
ATG4D-204ENST00000586417 PKNOX2Q96KN3 472 aa20.97■□□□□ 0.95
ATG4D-204ENST00000586417 BRD8Q9H0E9 1235 aa20.97■□□□□ 0.95
ATG4D-204ENST00000586417 CDH22Q9UJ99 828 aa20.97■□□□□ 0.95
ATG4D-204ENST00000586417 APOEP02649 317 aa20.97■□□□□ 0.95
ATG4D-204ENST00000586417 F11P03951 625 aa20.97■□□□□ 0.95
ATG4D-204ENST00000586417 MX2P20592 715 aa20.97■□□□□ 0.95
ATG4D-204ENST00000586417 CCR2P41597 374 aa20.97■□□□□ 0.95
ATG4D-204ENST00000586417 NTHL1P78549 312 aa20.97■□□□□ 0.95
ATG4D-204ENST00000586417 GABPB1Q06547 395 aaPredicted RBP20.97■□□□□ 0.95
ATG4D-204ENST00000586417 DLX2Q07687 328 aaPredicted RBP20.97■□□□□ 0.95
ATG4D-204ENST00000586417 ADAM15Q13444 863 aa20.97■□□□□ 0.95
ATG4D-204ENST00000586417 SEMA5AQ13591 1074 aa20.97■□□□□ 0.95
ATG4D-204ENST00000586417 MS4A13Q5J8X5 152 aa20.97■□□□□ 0.95
ATG4D-204ENST00000586417 HP1BP3Q5SSJ5 553 aaPredicted RBP20.97■□□□□ 0.95
ATG4D-204ENST00000586417 SYCP2LQ5T4T6 812 aa20.97■□□□□ 0.95
ATG4D-204ENST00000586417 TMEM184AQ6ZMB5 413 aa20.97■□□□□ 0.95
ATG4D-204ENST00000586417 ARHGEF18Q6ZSZ5 1173 aa20.97■□□□□ 0.95
ATG4D-204ENST00000586417 ZBED8Q8IZ13 594 aa20.97■□□□□ 0.95
ATG4D-204ENST00000586417 PDZD8Q8NEN9 1154 aa20.97■□□□□ 0.95
ATG4D-204ENST00000586417 FAM76AQ8TAV0 307 aa20.97■□□□□ 0.95
ATG4D-204ENST00000586417 EPS8L3Q8TE67 593 aaKnown RBP20.97■□□□□ 0.95
ATG4D-204ENST00000586417 TTC25Q96NG3 672 aa20.97■□□□□ 0.95
ATG4D-204ENST00000586417 CENPHQ9H3R5 247 aa20.97■□□□□ 0.95
ATG4D-204ENST00000586417 SLC12A8A0AV02 714 aa20.96■□□□□ 0.95
ATG4D-204ENST00000586417 ZNF840PA6NDX5 716 aa20.96■□□□□ 0.95
ATG4D-204ENST00000586417 OPHN1O60890 802 aa20.96■□□□□ 0.95
ATG4D-204ENST00000586417 ZNF189O75820 626 aaPredicted RBP20.96■□□□□ 0.95
ATG4D-204ENST00000586417 GJA1P17302 382 aa20.96■□□□□ 0.95
ATG4D-204ENST00000586417 GARSP41250 739 aaKnown RBP20.96■□□□□ 0.95
ATG4D-204ENST00000586417 RING1Q06587 406 aa20.96■□□□□ 0.95
ATG4D-204ENST00000586417 ARHGAP12Q8IWW6 846 aa20.96■□□□□ 0.95
ATG4D-204ENST00000586417 PDIK1LQ8N165 341 aa20.96■□□□□ 0.95
ATG4D-204ENST00000586417 MYLIPQ8WY64 445 aa20.96■□□□□ 0.95
ATG4D-204ENST00000586417 CELF6Q96J87 481 aaKnown RBP20.96■□□□□ 0.95
ATG4D-204ENST00000586417 GAS2L1Q99501 681 aaPredicted RBP20.96■□□□□ 0.95
ATG4D-204ENST00000586417 ROPN1BQ9BZX4 212 aaPredicted RBP20.96■□□□□ 0.95
ATG4D-204ENST00000586417 ROPN1Q9HAT0 212 aaPredicted RBP20.96■□□□□ 0.95
ATG4D-204ENST00000586417 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.96■□□□□ 0.95
ATG4D-204ENST00000586417 NUP205Q92621 2012 aa20.96■□□□□ 0.95
ATG4D-204ENST00000586417 MYL4P12829 197 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 TPSB2P20231 275 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 GABRR2P28476 465 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 TUBP50607 506 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 TPSAB1Q15661 275 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 RARS2Q5T160 578 aaKnown RBP20.95■□□□□ 0.94
ATG4D-204ENST00000586417 SYCE2Q6PIF2 218 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 GRASPQ7Z6J2 395 aaPredicted RBP20.95■□□□□ 0.94
ATG4D-204ENST00000586417 ZNF567Q8N184 647 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 ATP6V0D2Q8N8Y2 350 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 DEPDC1BQ8WUY9 529 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 EXOC4Q96A65 974 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 TCEAL4Q96EI5 215 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 PGM2Q96G03 612 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 BTN2A3PQ96KV6 586 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 SERPINB12Q96P63 405 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 CDK5RAP1Q96SZ6 601 aaKnown RBP20.95■□□□□ 0.94
ATG4D-204ENST00000586417 CDX2Q99626 313 aaPredicted RBP20.95■□□□□ 0.94
ATG4D-204ENST00000586417 CEP41Q9BYV8 373 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 CATSPERBQ9H7T0 1116 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 ASAH2Q9NR71 780 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 CLEC1BQ9P126 229 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 CLUHO75153 1309 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 WASH4PA8MWX3 477 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 KCNK1O00180 336 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 XYLBO75191 536 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 TCEA3O75764 348 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 STK10O94804 968 aaKnown RBP20.95■□□□□ 0.94
ATG4D-204ENST00000586417 APRTP07741 180 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 RHOP08100 348 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 PTPN2P17706 415 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 PTPN3P26045 913 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 ANKRD54Q6NXT1 300 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 ELMSAN1Q6PJG2 1045 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 PPP1R21Q6ZMI0 780 aa20.95■□□□□ 0.94
ATG4D-204ENST00000586417 CROCCP2Q86T23 111 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms