RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 ACTRT1Q8TDG2 376 aa18.8■□□□□ 0.6
RFFL-211ENST00000584541 COG1Q8WTW3 980 aa18.8■□□□□ 0.6
RFFL-211ENST00000584541 P3H4Q92791 437 aa18.8■□□□□ 0.6
RFFL-211ENST00000584541 SLC2A4RGQ9NR83 387 aa18.8■□□□□ 0.6
RFFL-211ENST00000584541 ETNK2Q9NVF9 386 aa18.8■□□□□ 0.6
RFFL-211ENST00000584541 DNAJC17Q9NVM6 304 aaKnown RBP18.8■□□□□ 0.6
RFFL-211ENST00000584541 RNF14Q9UBS8 474 aa18.8■□□□□ 0.6
RFFL-211ENST00000584541 ZNF212Q9UDV6 495 aa18.8■□□□□ 0.6
RFFL-211ENST00000584541 SORCS3Q9UPU3 1222 aa18.8■□□□□ 0.6
RFFL-211ENST00000584541 HEY1Q9Y5J3 304 aa18.8■□□□□ 0.6
RFFL-211ENST00000584541 RAD54BQ9Y620 910 aa18.8■□□□□ 0.6
RFFL-211ENST00000584541 CHD5Q8TDI0 1954 aa18.79■□□□□ 0.6
RFFL-211ENST00000584541 ILVBLA1L0T0 632 aa18.79■□□□□ 0.6
RFFL-211ENST00000584541 OTOL1A6NHN0 477 aaPredicted RBP18.79■□□□□ 0.6
RFFL-211ENST00000584541 APOC4-APOC2K7ER74 178 aa18.79■□□□□ 0.6
RFFL-211ENST00000584541 APOC2P02655 101 aa18.79■□□□□ 0.6
RFFL-211ENST00000584541 NR2C2P49116 596 aa18.79■□□□□ 0.6
RFFL-211ENST00000584541 DGKGP49619 791 aa18.79■□□□□ 0.6
RFFL-211ENST00000584541 SLC12A1Q13621 1099 aa18.79■□□□□ 0.6
RFFL-211ENST00000584541 POLD3Q15054 466 aaPredicted RBP18.79■□□□□ 0.6
RFFL-211ENST00000584541 C1orf228Q6PIY5 440 aa18.79■□□□□ 0.6
RFFL-211ENST00000584541 PLD5Q8N7P1 536 aa18.79■□□□□ 0.6
RFFL-211ENST00000584541 MUC3BQ9H195 1237 aa18.79■□□□□ 0.6
RFFL-211ENST00000584541 MAGEH1Q9H213 219 aa18.79■□□□□ 0.6
RFFL-211ENST00000584541 C8orf33Q9H7E9 229 aaPredicted RBP18.79■□□□□ 0.6
RFFL-211ENST00000584541 NDFIP2Q9NV92 336 aa18.79■□□□□ 0.6
RFFL-211ENST00000584541 DEC1Q9P2X7 70 aa18.79■□□□□ 0.6
RFFL-211ENST00000584541 TTC7AQ9ULT0 858 aaPredicted RBP18.79■□□□□ 0.6
RFFL-211ENST00000584541 DUSP12Q9UNI6 340 aa18.79■□□□□ 0.6
RFFL-211ENST00000584541 ARHGAP42A6NI28 874 aa18.78■□□□□ 0.6
RFFL-211ENST00000584541 ZNF185O15231 689 aa18.78■□□□□ 0.6
RFFL-211ENST00000584541 NARSO43776 548 aaKnown RBP18.78■□□□□ 0.6
RFFL-211ENST00000584541 MFSD11O43934 449 aa18.78■□□□□ 0.6
RFFL-211ENST00000584541 EIF2DP41214 584 aaKnown RBP18.78■□□□□ 0.6
RFFL-211ENST00000584541 GNA12Q03113 381 aa18.78■□□□□ 0.6
RFFL-211ENST00000584541 TUBB2AQ13885 445 aa18.78■□□□□ 0.6
RFFL-211ENST00000584541 PARP15Q460N3 678 aa18.78■□□□□ 0.6
RFFL-211ENST00000584541 RNF219Q5W0B1 726 aaPredicted RBP18.78■□□□□ 0.6
RFFL-211ENST00000584541 GRAMD4Q6IC98 578 aa18.78■□□□□ 0.6
RFFL-211ENST00000584541 CXorf57Q6NSI4 855 aaKnown RBP18.78■□□□□ 0.6
RFFL-211ENST00000584541 ZNF354CQ86Y25 554 aa18.78■□□□□ 0.6
RFFL-211ENST00000584541 NPWQ8N729 165 aa18.78■□□□□ 0.6
RFFL-211ENST00000584541 P2RY11Q96G91 374 aa18.78■□□□□ 0.6
RFFL-211ENST00000584541 MSANTD3Q96H12 275 aa18.78■□□□□ 0.6
RFFL-211ENST00000584541 MS4A14Q96JA4 679 aa18.78■□□□□ 0.6
RFFL-211ENST00000584541 CAPZA3Q96KX2 299 aa18.78■□□□□ 0.6
RFFL-211ENST00000584541 TUBB2BQ9BVA1 445 aa18.78■□□□□ 0.6
RFFL-211ENST00000584541 FBXO10Q9UK96 956 aa18.78■□□□□ 0.6
RFFL-211ENST00000584541 MFHAS1Q9Y4C4 1052 aa18.78■□□□□ 0.6
RFFL-211ENST00000584541 SHROOM3Q8TF72 1996 aa18.77■□□□□ 0.6
RFFL-211ENST00000584541 DFFAO00273 331 aa18.77■□□□□ 0.6
RFFL-211ENST00000584541 NCAM2O15394 837 aa18.77■□□□□ 0.6
RFFL-211ENST00000584541 TULP3O75386 442 aa18.77■□□□□ 0.6
RFFL-211ENST00000584541 GLULP15104 373 aa18.77■□□□□ 0.6
RFFL-211ENST00000584541 MX2P20592 715 aa18.77■□□□□ 0.6
RFFL-211ENST00000584541 GBE1Q04446 702 aa18.77■□□□□ 0.6
RFFL-211ENST00000584541 ADCY2Q08462 1091 aa18.77■□□□□ 0.6
RFFL-211ENST00000584541 LMAN2Q12907 356 aa18.77■□□□□ 0.6
RFFL-211ENST00000584541 KLF1Q13351 362 aaPredicted RBP18.77■□□□□ 0.6
RFFL-211ENST00000584541 GAB4Q2WGN9 574 aa18.77■□□□□ 0.6
RFFL-211ENST00000584541 FSCBQ5H9T9 825 aa18.77■□□□□ 0.6
RFFL-211ENST00000584541 NUDT18Q6ZVK8 323 aa18.77■□□□□ 0.6
RFFL-211ENST00000584541 ADAT2Q7Z6V5 191 aaKnown RBP18.77■□□□□ 0.6
RFFL-211ENST00000584541 RALGPS2Q86X27 583 aaPredicted RBP18.77■□□□□ 0.6
RFFL-211ENST00000584541 RNF135Q8IUD6 432 aa18.77■□□□□ 0.6
RFFL-211ENST00000584541 ETFBKMTQ8IXQ9 262 aa18.77■□□□□ 0.6
RFFL-211ENST00000584541 GJD3Q8N144 294 aa18.77■□□□□ 0.6
RFFL-211ENST00000584541 WFDC5Q8TCV5 224 aa18.77■□□□□ 0.6
RFFL-211ENST00000584541 HAUS1Q96CS2 278 aa18.77■□□□□ 0.6
RFFL-211ENST00000584541 CELF6Q96J87 481 aaKnown RBP18.77■□□□□ 0.6
RFFL-211ENST00000584541 HERPUD2Q9BSE4 406 aa18.77■□□□□ 0.6
RFFL-211ENST00000584541 ABCB8Q9NUT2 735 aa18.77■□□□□ 0.6
RFFL-211ENST00000584541 GGA2Q9UJY4 613 aa18.77■□□□□ 0.6
RFFL-211ENST00000584541 CLEC4EQ9ULY5 219 aa18.77■□□□□ 0.6
RFFL-211ENST00000584541 HPCAL4Q9UM19 191 aa18.77■□□□□ 0.6
RFFL-211ENST00000584541 NYNRINQ9P2P1 1898 aaKnown RBP18.77■□□□□ 0.6
RFFL-211ENST00000584541 PRUNE2Q8WUY3 3088 aa18.77■□□□□ 0.59
RFFL-211ENST00000584541 GOLGA6L10A0A0M3HER8 536 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 RASA4BC9J798 803 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 PPP1R12AO14974 1030 aaPredicted RBP18.76■□□□□ 0.59
RFFL-211ENST00000584541 RASA4O43374 803 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 PABPC1P11940 636 aaKnown RBP18.76■□□□□ 0.59
RFFL-211ENST00000584541 HLA-FP30511 346 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 CSKP41240 450 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 DMC1Q14565 340 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 PDK1Q15118 436 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 TJAP1Q5JTD0 557 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 AFMIDQ63HM1 303 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 IL31Q6EBC2 164 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 NPNTQ6UXI9 565 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 C12orf40Q86WS4 652 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 CREG2Q8IUH2 290 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 LRRC49Q8IUZ0 686 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 SUGP1Q8IWZ8 645 aaKnown RBP18.76■□□□□ 0.59
RFFL-211ENST00000584541 AHI1Q8N157 1196 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 WFIKKN2Q8TEU8 576 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 ARHGEF2Q92974 986 aaKnown RBP18.76■□□□□ 0.59
RFFL-211ENST00000584541 PNKPQ96T60 521 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 SPON2Q9BUD6 331 aa18.76■□□□□ 0.59
RFFL-211ENST00000584541 FRMD8P1Q9BZ68 369 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms