RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 ZSWIM1Q9BR11 485 aa11.56□□□□□ -0.56
CCDC47-206ENST00000584112 TRIM62Q9BVG3 475 aa11.56□□□□□ -0.56
CCDC47-206ENST00000584112 EPN3Q9H201 632 aa11.56□□□□□ -0.56
CCDC47-206ENST00000584112 UBE2TQ9NPD8 197 aaPredicted RBP11.56□□□□□ -0.56
CCDC47-206ENST00000584112 ELOVL2Q9NXB9 296 aa11.56□□□□□ -0.56
CCDC47-206ENST00000584112 CHMP5Q9NZZ3 219 aa11.56□□□□□ -0.56
CCDC47-206ENST00000584112 SUSD2Q9UGT4 822 aa11.56□□□□□ -0.56
CCDC47-206ENST00000584112 CYP8B1Q9UNU6 501 aa11.56□□□□□ -0.56
CCDC47-206ENST00000584112 PCDHGB2Q9Y5G2 931 aa11.56□□□□□ -0.56
CCDC47-206ENST00000584112 RAD54BQ9Y620 910 aa11.56□□□□□ -0.56
CCDC47-206ENST00000584112 A1L4Q6 167 aa11.55□□□□□ -0.56
CCDC47-206ENST00000584112 TYW5A2RUC4 315 aaKnown RBP11.55□□□□□ -0.56
CCDC47-206ENST00000584112 PIK3R2O00459 728 aa11.55□□□□□ -0.56
CCDC47-206ENST00000584112 IRAK2O43187 625 aa11.55□□□□□ -0.56
CCDC47-206ENST00000584112 MSI1O43347 362 aaKnown RBP11.55□□□□□ -0.56
CCDC47-206ENST00000584112 SYNCRIPO60506 623 aaKnown RBP11.55□□□□□ -0.56
CCDC47-206ENST00000584112 NDUFS2O75306 463 aa11.55□□□□□ -0.56
CCDC47-206ENST00000584112 IGLV3-27P01718 113 aa11.55□□□□□ -0.56
CCDC47-206ENST00000584112 FAM87AP0C7U9 286 aa11.55□□□□□ -0.56
CCDC47-206ENST00000584112 HOXD9P28356 352 aaPredicted RBP11.55□□□□□ -0.56
CCDC47-206ENST00000584112 RPL34P49207 117 aaKnown RBP11.55□□□□□ -0.56
CCDC47-206ENST00000584112 SLC11A2P49281 568 aa11.55□□□□□ -0.56
CCDC47-206ENST00000584112 ENPP2Q13822 863 aa11.55□□□□□ -0.56
CCDC47-206ENST00000584112 ZNF234Q14588 700 aa11.55□□□□□ -0.56
CCDC47-206ENST00000584112 SMYD5Q6GMV2 418 aa11.55□□□□□ -0.56
CCDC47-206ENST00000584112 FBXL19Q6PCT2 694 aa11.55□□□□□ -0.56
CCDC47-206ENST00000584112 KIAA1324Q6UXG2 1013 aaKnown RBP11.55□□□□□ -0.56
CCDC47-206ENST00000584112 GBP6Q6ZN66 633 aa11.55□□□□□ -0.56
CCDC47-206ENST00000584112 METTL3Q86U44 580 aaKnown RBP11.55□□□□□ -0.56
CCDC47-206ENST00000584112 CREBRFQ8IUR6 639 aa11.55□□□□□ -0.56
CCDC47-206ENST00000584112 MLKLQ8NB16 471 aa11.55□□□□□ -0.56
CCDC47-206ENST00000584112 AZIN2Q96A70 460 aa11.55□□□□□ -0.56
CCDC47-206ENST00000584112 TMA16Q96EY4 203 aaKnown RBP11.55□□□□□ -0.56
CCDC47-206ENST00000584112 P2RY11Q96G91 374 aa11.55□□□□□ -0.56
CCDC47-206ENST00000584112 MRGPRX1Q96LB2 322 aa11.55□□□□□ -0.56
CCDC47-206ENST00000584112 SERPINB11Q96P15 392 aa11.55□□□□□ -0.56
CCDC47-206ENST00000584112 DDX50Q9BQ39 737 aaKnown RBP11.55□□□□□ -0.56
CCDC47-206ENST00000584112 CIPCQ9C0C6 399 aa11.55□□□□□ -0.56
CCDC47-206ENST00000584112 ST7Q9NRC1 585 aa11.55□□□□□ -0.56
CCDC47-206ENST00000584112 FTSJ1Q9UET6 329 aa11.55□□□□□ -0.56
CCDC47-206ENST00000584112 SDK2Q58EX2 2172 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 A0A1B0GTW7 788 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 GTPBP10A4D1E9 387 aaKnown RBP11.54□□□□□ -0.56
CCDC47-206ENST00000584112 WASH3PC4AMC7 463 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 KCNK3O14649 394 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 THAP12O43422 761 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 TSPAN3O60637 253 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 GABBR2O75899 941 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 LETM1O95202 739 aaPredicted RBP11.54□□□□□ -0.56
CCDC47-206ENST00000584112 NCAM1P13591 858 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 GNA15P30679 374 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 GPD2P43304 727 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 TBX4P57082 545 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 NNTQ13423 1086 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 TPD52L1Q16890 204 aaPredicted RBP11.54□□□□□ -0.56
CCDC47-206ENST00000584112 SKIDA1Q1XH10 827 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 FUT11Q495W5 492 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 MPP7Q5T2T1 576 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 SYCP2LQ5T4T6 812 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 TRIM65Q6PJ69 517 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 SERPINA13PQ6UXR4 307 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 ZC3H18Q86VM9 953 aaKnown RBP11.54□□□□□ -0.56
CCDC47-206ENST00000584112 CLEC4CQ8WTT0 213 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 STK32AQ8WU08 396 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 EXTL1Q92935 676 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 FOXJ1Q92949 421 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 FAM149B1Q96BN6 582 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 ZNF419Q96HQ0 510 aaPredicted RBP11.54□□□□□ -0.56
CCDC47-206ENST00000584112 MIS12Q9H081 205 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 MIR1-1HGQ9H1L0 117 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 APEX2Q9UBZ4 518 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 CLEC4EQ9ULY5 219 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 PLA2G4CQ9UP65 541 aa11.54□□□□□ -0.56
CCDC47-206ENST00000584112 ACSL4O60488 711 aa11.53□□□□□ -0.56
CCDC47-206ENST00000584112 RFPL3O75679 317 aa11.53□□□□□ -0.56
CCDC47-206ENST00000584112 CALCAP01258 141 aa11.53□□□□□ -0.56
CCDC47-206ENST00000584112 HLA-FP30511 346 aa11.53□□□□□ -0.56
CCDC47-206ENST00000584112 OXTRP30559 389 aa11.53□□□□□ -0.56
CCDC47-206ENST00000584112 GRK6P43250 576 aa11.53□□□□□ -0.56
CCDC47-206ENST00000584112 MTIF2P46199 727 aaKnown RBP11.53□□□□□ -0.56
CCDC47-206ENST00000584112 IL9RQ01113 521 aa11.53□□□□□ -0.56
CCDC47-206ENST00000584112 EXOC3L4Q17RC7 722 aa11.53□□□□□ -0.56
CCDC47-206ENST00000584112 BEND5Q7L4P6 421 aa11.53□□□□□ -0.56
CCDC47-206ENST00000584112 PTRH1Q86Y79 214 aaKnown RBP11.53□□□□□ -0.56
CCDC47-206ENST00000584112 FAM114A1Q8IWE2 563 aa11.53□□□□□ -0.56
CCDC47-206ENST00000584112 AHI1Q8N157 1196 aa11.53□□□□□ -0.56
CCDC47-206ENST00000584112 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.53□□□□□ -0.56
CCDC47-206ENST00000584112 DQX1Q8TE96 717 aaKnown RBP11.53□□□□□ -0.56
CCDC47-206ENST00000584112 ZNF606Q8WXB4 792 aa11.53□□□□□ -0.56
CCDC47-206ENST00000584112 PRCCQ92733 491 aaPredicted RBP11.53□□□□□ -0.56
CCDC47-206ENST00000584112 SIPA1Q96FS4 1042 aa11.53□□□□□ -0.56
CCDC47-206ENST00000584112 MED15Q96RN5 788 aa11.53□□□□□ -0.56
CCDC47-206ENST00000584112 CRACR2AQ9BSW2 395 aa11.53□□□□□ -0.56
CCDC47-206ENST00000584112 FBRSQ9HAH7 460 aa11.53□□□□□ -0.56
CCDC47-206ENST00000584112 ABCB8Q9NUT2 735 aa11.53□□□□□ -0.56
CCDC47-206ENST00000584112 GGA2Q9UJY4 613 aa11.53□□□□□ -0.56
CCDC47-206ENST00000584112 TLR6Q9Y2C9 796 aa11.53□□□□□ -0.56
CCDC47-206ENST00000584112 APCP25054 2843 aa11.53□□□□□ -0.56
CCDC47-206ENST00000584112 ANKHD1Q8IWZ3 2542 aaKnown RBP11.52□□□□□ -0.56
CCDC47-206ENST00000584112 A0A1B0GVT2 93 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms